RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 GOLGA2Q08379 1002 aa24.65■■□□□ 1.54
CTDSP1-207ENST00000473420 CCDC87Q9NVE4 849 aa24.65■■□□□ 1.54
CTDSP1-207ENST00000473420 PRAMEF22A3QJZ6 481 aa24.64■■□□□ 1.54
CTDSP1-207ENST00000473420 R3HDM1Q15032 1099 aaKnown RBP24.64■■□□□ 1.54
CTDSP1-207ENST00000473420 INTS5Q6P9B9 1019 aaKnown RBP24.64■■□□□ 1.54
CTDSP1-207ENST00000473420 FLAD1Q8NFF5 587 aa24.64■■□□□ 1.54
CTDSP1-207ENST00000473420 MYH16Q9H6N6 1097 aa24.64■■□□□ 1.54
CTDSP1-207ENST00000473420 USP16Q9Y5T5 823 aa24.64■■□□□ 1.54
CTDSP1-207ENST00000473420 GNPATO15228 680 aa24.63■■□□□ 1.53
CTDSP1-207ENST00000473420 RPS6KA4O75676 772 aa24.63■■□□□ 1.53
CTDSP1-207ENST00000473420 SSFA2P28290 1259 aa24.63■■□□□ 1.53
CTDSP1-207ENST00000473420 TSR2Q969E8 191 aaKnown RBP24.63■■□□□ 1.53
CTDSP1-207ENST00000473420 C4AP0C0L4 1744 aa24.63■■□□□ 1.53
CTDSP1-207ENST00000473420 SOS1Q07889 1333 aaPredicted RBP24.62■■□□□ 1.53
CTDSP1-207ENST00000473420 PNPLA7Q6ZV29 1317 aa24.62■■□□□ 1.53
CTDSP1-207ENST00000473420 FANCIQ9NVI1 1328 aa24.62■■□□□ 1.53
CTDSP1-207ENST00000473420 SPINK5Q9NQ38 1064 aaPredicted RBP24.62■■□□□ 1.53
CTDSP1-207ENST00000473420 RTCBQ9Y3I0 505 aaKnown RBP24.62■■□□□ 1.53
CTDSP1-207ENST00000473420 PSDA5PKW4 1024 aaPredicted RBP24.6■■□□□ 1.53
CTDSP1-207ENST00000473420 E9PSI1 815 aa24.6■■□□□ 1.53
CTDSP1-207ENST00000473420 ADRA2BP18089 450 aa24.6■■□□□ 1.53
CTDSP1-207ENST00000473420 ZBTB1Q9Y2K1 713 aa24.6■■□□□ 1.53
CTDSP1-207ENST00000473420 ERBB4Q15303 1308 aa24.6■■□□□ 1.53
CTDSP1-207ENST00000473420 KRT24Q2M2I5 525 aa24.59■■□□□ 1.53
CTDSP1-207ENST00000473420 ZBED9Q6R2W3 1325 aa24.59■■□□□ 1.53
CTDSP1-207ENST00000473420 DUSP27Q5VZP5 1158 aa24.58■■□□□ 1.53
CTDSP1-207ENST00000473420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.57■■□□□ 1.52
CTDSP1-207ENST00000473420 A1BGP04217 495 aa24.57■■□□□ 1.52
CTDSP1-207ENST00000473420 IL6STP40189 918 aaPredicted RBP24.57■■□□□ 1.52
CTDSP1-207ENST00000473420 SLFN5Q08AF3 891 aa24.57■■□□□ 1.52
CTDSP1-207ENST00000473420 AMIGO3Q86WK7 504 aa24.57■■□□□ 1.52
CTDSP1-207ENST00000473420 COL15A1P39059 1388 aa24.56■■□□□ 1.52
CTDSP1-207ENST00000473420 COL24A1Q17RW2 1714 aa24.56■■□□□ 1.52
CTDSP1-207ENST00000473420 CANXP27824 592 aaKnown RBP24.56■■□□□ 1.52
CTDSP1-207ENST00000473420 TRAPPC3LQ5T215 181 aa24.56■■□□□ 1.52
CTDSP1-207ENST00000473420 C8orf58Q8NAV2 365 aa24.56■■□□□ 1.52
CTDSP1-207ENST00000473420 CHMP4AQ9BY43 222 aa24.56■■□□□ 1.52
CTDSP1-207ENST00000473420 PHF14O94880 888 aa24.55■■□□□ 1.52
CTDSP1-207ENST00000473420 EIF5P55010 431 aaKnown RBP24.55■■□□□ 1.52
CTDSP1-207ENST00000473420 COL23A1Q86Y22 540 aaPredicted RBP24.55■■□□□ 1.52
CTDSP1-207ENST00000473420 SLC16A10Q8TF71 515 aa24.55■■□□□ 1.52
CTDSP1-207ENST00000473420 TRMT2AQ8IZ69 625 aaKnown RBP24.54■■□□□ 1.52
CTDSP1-207ENST00000473420 EIF2S2P20042 333 aaKnown RBP24.53■■□□□ 1.52
CTDSP1-207ENST00000473420 TWISTNBQ3B726 338 aaPredicted RBP24.53■■□□□ 1.52
CTDSP1-207ENST00000473420 HDGFL1Q5TGJ6 251 aa24.53■■□□□ 1.52
CTDSP1-207ENST00000473420 ARHGEF1Q92888 912 aaKnown RBP24.53■■□□□ 1.52
CTDSP1-207ENST00000473420 SCN7AQ01118 1682 aa24.53■■□□□ 1.52
CTDSP1-207ENST00000473420 BCORQ6W2J9 1755 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 A0A087WZG4 1122 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 NBPF26B4DH59 902 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 EXOSC9Q06265 439 aaKnown RBP24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 NBPF10Q6P3W6 841 aaKnown RBP24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 NBPF15Q8N660 670 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 TSPYL6Q8N831 410 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 CDCA7LQ96GN5 454 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 CACNA1FO60840 1977 aa24.52■■□□□ 1.52
CTDSP1-207ENST00000473420 ELL2O00472 640 aaPredicted RBP24.51■■□□□ 1.51
CTDSP1-207ENST00000473420 SMIM5Q71RC9 77 aa24.51■■□□□ 1.51
CTDSP1-207ENST00000473420 PDGFDQ9GZP0 370 aaPredicted RBP24.51■■□□□ 1.51
CTDSP1-207ENST00000473420 MSH5O43196 834 aa24.5■■□□□ 1.51
CTDSP1-207ENST00000473420 RFC4P35249 363 aa24.5■■□□□ 1.51
CTDSP1-207ENST00000473420 NPM2Q86SE8 214 aaKnown RBP24.5■■□□□ 1.51
CTDSP1-207ENST00000473420 PIP4K2AP48426 406 aaPredicted RBP24.49■■□□□ 1.51
CTDSP1-207ENST00000473420 PDIA6Q15084 440 aa24.49■■□□□ 1.51
CTDSP1-207ENST00000473420 DDX21Q9NR30 783 aaKnown RBP eCLIP24.49■■□□□ 1.51
CTDSP1-207ENST00000473420 CCDC30Q5VVM6 783 aa24.48■■□□□ 1.51
CTDSP1-207ENST00000473420 USP42Q9H9J4 1324 aaKnown RBP24.48■■□□□ 1.51
CTDSP1-207ENST00000473420 DBF4Q9UBU7 674 aaPredicted RBP24.48■■□□□ 1.51
CTDSP1-207ENST00000473420 VAMP4O75379 141 aa24.47■■□□□ 1.51
CTDSP1-207ENST00000473420 NECTIN2Q92692 538 aa24.47■■□□□ 1.51
CTDSP1-207ENST00000473420 MTFR1LQ9H019 292 aa24.47■■□□□ 1.51
CTDSP1-207ENST00000473420 NARFQ9UHQ1 456 aa24.47■■□□□ 1.51
CTDSP1-207ENST00000473420 MYL6BP14649 208 aa24.46■■□□□ 1.51
CTDSP1-207ENST00000473420 LRP10Q7Z4F1 713 aa24.46■■□□□ 1.51
CTDSP1-207ENST00000473420 CHPF2Q9P2E5 772 aa24.46■■□□□ 1.51
CTDSP1-207ENST00000473420 ZNF330Q9Y3S2 320 aaPredicted RBP24.46■■□□□ 1.51
CTDSP1-207ENST00000473420 ZPR1O75312 459 aa24.45■■□□□ 1.5
CTDSP1-207ENST00000473420 LRP5O75197 1615 aa24.45■■□□□ 1.5
CTDSP1-207ENST00000473420 DZIP3Q86Y13 1208 aaKnown RBP24.44■■□□□ 1.5
CTDSP1-207ENST00000473420 HYPKQ9NX55 129 aa24.44■■□□□ 1.5
CTDSP1-207ENST00000473420 RGL2O15211 777 aa24.43■■□□□ 1.5
CTDSP1-207ENST00000473420 ZBTB7AO95365 584 aa24.43■■□□□ 1.5
CTDSP1-207ENST00000473420 CT47B1P0C2W7 299 aaPredicted RBP24.43■■□□□ 1.5
CTDSP1-207ENST00000473420 GYS1P13807 737 aa24.43■■□□□ 1.5
CTDSP1-207ENST00000473420 PROSER3Q2NL68 480 aa24.43■■□□□ 1.5
CTDSP1-207ENST00000473420 NUP98P52948 1817 aa24.42■■□□□ 1.5
CTDSP1-207ENST00000473420 ZNF428Q96B54 188 aa24.42■■□□□ 1.5
CTDSP1-207ENST00000473420 STK31Q9BXU1 1019 aa24.42■■□□□ 1.5
CTDSP1-207ENST00000473420 SPON1Q9HCB6 807 aa24.42■■□□□ 1.5
CTDSP1-207ENST00000473420 SRP68Q9UHB9 627 aaKnown RBP24.42■■□□□ 1.5
CTDSP1-207ENST00000473420 TBC1D2BQ9UPU7 963 aa24.42■■□□□ 1.5
CTDSP1-207ENST00000473420 ANXA1P04083 346 aa24.41■■□□□ 1.5
CTDSP1-207ENST00000473420 USPL1Q5W0Q7 1092 aa24.41■■□□□ 1.5
CTDSP1-207ENST00000473420 NLGN1Q8N2Q7 840 aa24.41■■□□□ 1.5
CTDSP1-207ENST00000473420 CAMTA2O94983 1202 aa24.4■■□□□ 1.5
CTDSP1-207ENST00000473420 KIF6Q6ZMV9 814 aa24.39■■□□□ 1.49
CTDSP1-207ENST00000473420 MAP3K15Q6ZN16 1313 aa24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 ERVV-1B6SEH8 477 aa24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 CLEC4GQ6UXB4 293 aa24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 TTLL7Q6ZT98 887 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms