RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 MIS18AQ9NYP9 233 aa12.09□□□□□ -0.47
C1orf56-203ENST00000473308 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
C1orf56-203ENST00000473308 STARD3NLO95772 234 aa12.08□□□□□ -0.48
C1orf56-203ENST00000473308 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
C1orf56-203ENST00000473308 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
C1orf56-203ENST00000473308 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
C1orf56-203ENST00000473308 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
C1orf56-203ENST00000473308 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
C1orf56-203ENST00000473308 ANP32CO43423 234 aa12.07□□□□□ -0.48
C1orf56-203ENST00000473308 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
C1orf56-203ENST00000473308 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
C1orf56-203ENST00000473308 PNISRQ8TF01 805 aaKnown RBP12.07□□□□□ -0.48
C1orf56-203ENST00000473308 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
C1orf56-203ENST00000473308 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
C1orf56-203ENST00000473308 USP42Q9H9J4 1324 aaKnown RBP12.07□□□□□ -0.48
C1orf56-203ENST00000473308 A1BGP04217 495 aa12.06□□□□□ -0.48
C1orf56-203ENST00000473308 MMP10P09238 476 aa12.06□□□□□ -0.48
C1orf56-203ENST00000473308 SNRPA1P09661 255 aaKnown RBP12.06□□□□□ -0.48
C1orf56-203ENST00000473308 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
C1orf56-203ENST00000473308 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
C1orf56-203ENST00000473308 NLGN2Q8NFZ4 835 aa12.06□□□□□ -0.48
C1orf56-203ENST00000473308 COL15A1P39059 1388 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 FKBP8Q14318 412 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 USPL1Q5W0Q7 1092 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 CD2APQ9Y5K6 639 aa12.05□□□□□ -0.48
C1orf56-203ENST00000473308 ZPR1O75312 459 aa12.04□□□□□ -0.48
C1orf56-203ENST00000473308 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
C1orf56-203ENST00000473308 EIF4A1P60842 406 aaKnown RBP12.04□□□□□ -0.48
C1orf56-203ENST00000473308 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
C1orf56-203ENST00000473308 A0A087WZG4 1122 aa12.03□□□□□ -0.48
C1orf56-203ENST00000473308 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
C1orf56-203ENST00000473308 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
C1orf56-203ENST00000473308 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
C1orf56-203ENST00000473308 APAF1O14727 1248 aa12.02□□□□□ -0.49
C1orf56-203ENST00000473308 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
C1orf56-203ENST00000473308 TM4SF1P30408 202 aa12.02□□□□□ -0.49
C1orf56-203ENST00000473308 PIP4K2AP48426 406 aaPredicted RBP12.02□□□□□ -0.49
C1orf56-203ENST00000473308 DDR1Q08345 913 aa12.02□□□□□ -0.49
C1orf56-203ENST00000473308 TSPYL4Q9UJ04 414 aa12.02□□□□□ -0.49
C1orf56-203ENST00000473308 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
C1orf56-203ENST00000473308 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
C1orf56-203ENST00000473308 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
C1orf56-203ENST00000473308 CHL1O00533 1208 aa12.01□□□□□ -0.49
C1orf56-203ENST00000473308 NBPF10Q6P3W6 841 aaKnown RBP12.01□□□□□ -0.49
C1orf56-203ENST00000473308 NBPF15Q8N660 670 aa12.01□□□□□ -0.49
C1orf56-203ENST00000473308 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
C1orf56-203ENST00000473308 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
C1orf56-203ENST00000473308 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
C1orf56-203ENST00000473308 NFIXQ14938 502 aa12□□□□□ -0.49
C1orf56-203ENST00000473308 GPR162Q16538 588 aa12□□□□□ -0.49
C1orf56-203ENST00000473308 KIF13BQ9NQT8 1826 aa12□□□□□ -0.49
C1orf56-203ENST00000473308 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
C1orf56-203ENST00000473308 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
C1orf56-203ENST00000473308 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
C1orf56-203ENST00000473308 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
C1orf56-203ENST00000473308 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
C1orf56-203ENST00000473308 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
C1orf56-203ENST00000473308 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
C1orf56-203ENST00000473308 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
C1orf56-203ENST00000473308 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
C1orf56-203ENST00000473308 TGFB2P61812 414 aa11.97□□□□□ -0.49
C1orf56-203ENST00000473308 TBC1D9BQ66K14 1250 aa11.97□□□□□ -0.49
C1orf56-203ENST00000473308 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
C1orf56-203ENST00000473308 SCN7AQ01118 1682 aa11.97□□□□□ -0.49
C1orf56-203ENST00000473308 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.49
C1orf56-203ENST00000473308 AFDNP55196 1824 aaKnown RBP11.96□□□□□ -0.49
C1orf56-203ENST00000473308 SERPINB2P05120 415 aa11.96□□□□□ -0.49
C1orf56-203ENST00000473308 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
C1orf56-203ENST00000473308 KIAA1551Q9HCM1 1747 aa11.96□□□□□ -0.49
C1orf56-203ENST00000473308 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
C1orf56-203ENST00000473308 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 ERBB4Q15303 1308 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 A0A0G2JLW4 131 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 DPEP1P16444 411 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
C1orf56-203ENST00000473308 PDIA6Q15084 440 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 KRT24Q2M2I5 525 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 MBIPQ9NS73 344 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 IFT57Q9NWB7 429 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
C1orf56-203ENST00000473308 RGL2O15211 777 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 MYL6BP14649 208 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 KCNA3P22001 575 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 YY1P25490 414 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
C1orf56-203ENST00000473308 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 CHD4Q14839 1912 aa11.94□□□□□ -0.5
C1orf56-203ENST00000473308 GNAI1P63096 354 aa11.93□□□□□ -0.5
C1orf56-203ENST00000473308 HLFQ16534 295 aa11.93□□□□□ -0.5
C1orf56-203ENST00000473308 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
C1orf56-203ENST00000473308 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms