RNA–Protein interactions for RNA: ENST00000472737.1

SYP-206, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-206ENST00000472737 KCNQ4P56696 695 aa16.51■□□□□ 0.23
SYP-206ENST00000472737 EIF4A1P60842 406 aaKnown RBP16.51■□□□□ 0.23
SYP-206ENST00000472737 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
SYP-206ENST00000472737 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
SYP-206ENST00000472737 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
SYP-206ENST00000472737 TUBGCP6Q96RT7 1819 aa16.5■□□□□ 0.23
SYP-206ENST00000472737 LRP5O75197 1615 aa16.5■□□□□ 0.23
SYP-206ENST00000472737 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
SYP-206ENST00000472737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
SYP-206ENST00000472737 RGL2O15211 777 aa16.49■□□□□ 0.23
SYP-206ENST00000472737 GIGYF1O75420 1035 aaPredicted RBP16.49■□□□□ 0.23
SYP-206ENST00000472737 POLD1P28340 1107 aa16.49■□□□□ 0.23
SYP-206ENST00000472737 RFC4P35249 363 aa16.49■□□□□ 0.23
SYP-206ENST00000472737 IL6STP40189 918 aaPredicted RBP16.49■□□□□ 0.23
SYP-206ENST00000472737 THUMPD2Q9BTF0 503 aaKnown RBP16.49■□□□□ 0.23
SYP-206ENST00000472737 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
SYP-206ENST00000472737 MSH5O43196 834 aa16.48■□□□□ 0.23
SYP-206ENST00000472737 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
SYP-206ENST00000472737 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
SYP-206ENST00000472737 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
SYP-206ENST00000472737 NLGN1Q8N2Q7 840 aa16.47■□□□□ 0.23
SYP-206ENST00000472737 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
SYP-206ENST00000472737 KCNQ3O43525 872 aa16.46■□□□□ 0.23
SYP-206ENST00000472737 ZPR1O75312 459 aa16.46■□□□□ 0.23
SYP-206ENST00000472737 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
SYP-206ENST00000472737 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
SYP-206ENST00000472737 EIF5P55010 431 aaKnown RBP16.45■□□□□ 0.22
SYP-206ENST00000472737 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
SYP-206ENST00000472737 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
SYP-206ENST00000472737 PHF14O94880 888 aa16.44■□□□□ 0.22
SYP-206ENST00000472737 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
SYP-206ENST00000472737 COL15A1P39059 1388 aa16.43■□□□□ 0.22
SYP-206ENST00000472737 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
SYP-206ENST00000472737 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
SYP-206ENST00000472737 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
SYP-206ENST00000472737 ZBTB1Q9Y2K1 713 aa16.43■□□□□ 0.22
SYP-206ENST00000472737 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
SYP-206ENST00000472737 PPP1R1BQ9UD71 204 aaPredicted RBP16.42■□□□□ 0.22
SYP-206ENST00000472737 ZNF652Q9Y2D9 606 aa16.42■□□□□ 0.22
SYP-206ENST00000472737 CACNA1FO60840 1977 aa16.41■□□□□ 0.22
SYP-206ENST00000472737 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
SYP-206ENST00000472737 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
SYP-206ENST00000472737 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
SYP-206ENST00000472737 A1BGP04217 495 aa16.4■□□□□ 0.22
SYP-206ENST00000472737 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
SYP-206ENST00000472737 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
SYP-206ENST00000472737 E9PSI1 815 aa16.39■□□□□ 0.21
SYP-206ENST00000472737 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
SYP-206ENST00000472737 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
SYP-206ENST00000472737 PTGER2P43116 358 aa16.38■□□□□ 0.21
SYP-206ENST00000472737 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
SYP-206ENST00000472737 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
SYP-206ENST00000472737 ARXQ96QS3 562 aa16.38■□□□□ 0.21
SYP-206ENST00000472737 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
SYP-206ENST00000472737 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
SYP-206ENST00000472737 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
SYP-206ENST00000472737 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
SYP-206ENST00000472737 GYS1P13807 737 aa16.37■□□□□ 0.21
SYP-206ENST00000472737 EIF2S2P20042 333 aaKnown RBP16.37■□□□□ 0.21
SYP-206ENST00000472737 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
SYP-206ENST00000472737 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
SYP-206ENST00000472737 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
SYP-206ENST00000472737 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
SYP-206ENST00000472737 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
SYP-206ENST00000472737 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
SYP-206ENST00000472737 PRAMEF22A3QJZ6 481 aa16.36■□□□□ 0.21
SYP-206ENST00000472737 ZNF428Q96B54 188 aa16.36■□□□□ 0.21
SYP-206ENST00000472737 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
SYP-206ENST00000472737 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
SYP-206ENST00000472737 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
SYP-206ENST00000472737 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
SYP-206ENST00000472737 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
SYP-206ENST00000472737 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
SYP-206ENST00000472737 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
SYP-206ENST00000472737 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
SYP-206ENST00000472737 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
SYP-206ENST00000472737 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
SYP-206ENST00000472737 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
SYP-206ENST00000472737 CD2APQ9Y5K6 639 aa16.34■□□□□ 0.21
SYP-206ENST00000472737 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
SYP-206ENST00000472737 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
SYP-206ENST00000472737 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
SYP-206ENST00000472737 BCORQ6W2J9 1755 aa16.33■□□□□ 0.2
SYP-206ENST00000472737 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
SYP-206ENST00000472737 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
SYP-206ENST00000472737 MMP10P09238 476 aa16.32■□□□□ 0.2
SYP-206ENST00000472737 TM4SF1P30408 202 aa16.32■□□□□ 0.2
SYP-206ENST00000472737 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
SYP-206ENST00000472737 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
SYP-206ENST00000472737 SETDB2Q96T68 719 aa16.32■□□□□ 0.2
SYP-206ENST00000472737 TBC1D2BQ9UPU7 963 aa16.32■□□□□ 0.2
SYP-206ENST00000472737 MYL6BP14649 208 aa16.31■□□□□ 0.2
SYP-206ENST00000472737 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
SYP-206ENST00000472737 FKBP8Q14318 412 aa16.31■□□□□ 0.2
SYP-206ENST00000472737 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
SYP-206ENST00000472737 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
SYP-206ENST00000472737 CARMIL3Q8ND23 1372 aa16.3■□□□□ 0.2
SYP-206ENST00000472737 PDIA6Q15084 440 aa16.3■□□□□ 0.2
SYP-206ENST00000472737 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
SYP-206ENST00000472737 NUP98P52948 1817 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms