RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
ITGB1-209ENST00000472147 IL2RBP14784 551 aa8.33□□□□□ -1.08
ITGB1-209ENST00000472147 PSEN2P49810 448 aa8.33□□□□□ -1.08
ITGB1-209ENST00000472147 TTC13Q8NBP0 860 aa8.33□□□□□ -1.08
ITGB1-209ENST00000472147 KCNK17Q96T54 332 aa8.33□□□□□ -1.08
ITGB1-209ENST00000472147 RAB3GAP2Q9H2M9 1393 aa8.33□□□□□ -1.08
ITGB1-209ENST00000472147 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
ITGB1-209ENST00000472147 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
ITGB1-209ENST00000472147 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
ITGB1-209ENST00000472147 TFCP2L1Q9NZI6 479 aa8.32□□□□□ -1.08
ITGB1-209ENST00000472147 RREB1Q92766 1687 aa8.32□□□□□ -1.08
ITGB1-209ENST00000472147 USP6P35125 1406 aa8.31□□□□□ -1.08
ITGB1-209ENST00000472147 PRSS12P56730 875 aa8.31□□□□□ -1.08
ITGB1-209ENST00000472147 NUP188Q5SRE5 1749 aa8.31□□□□□ -1.08
ITGB1-209ENST00000472147 CRYBG1Q9Y4K1 1723 aa8.3□□□□□ -1.08
ITGB1-209ENST00000472147 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
ITGB1-209ENST00000472147 CDCA7LQ96GN5 454 aa8.3□□□□□ -1.08
ITGB1-209ENST00000472147 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
ITGB1-209ENST00000472147 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
ITGB1-209ENST00000472147 LMO7Q8WWI1 1683 aa8.3□□□□□ -1.08
ITGB1-209ENST00000472147 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
ITGB1-209ENST00000472147 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
ITGB1-209ENST00000472147 FLAD1Q8NFF5 587 aa8.29□□□□□ -1.08
ITGB1-209ENST00000472147 DDX54Q8TDD1 881 aaKnown RBP8.29□□□□□ -1.08
ITGB1-209ENST00000472147 ZBED2Q9BTP6 218 aa8.29□□□□□ -1.08
ITGB1-209ENST00000472147 SLC4A5Q9BY07 1137 aa8.29□□□□□ -1.08
ITGB1-209ENST00000472147 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
ITGB1-209ENST00000472147 CD2APQ9Y5K6 639 aa8.29□□□□□ -1.08
ITGB1-209ENST00000472147 IRF6O14896 467 aa8.28□□□□□ -1.08
ITGB1-209ENST00000472147 MAP2K5Q13163 448 aa8.28□□□□□ -1.08
ITGB1-209ENST00000472147 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
ITGB1-209ENST00000472147 TSKSQ9UJT2 592 aa8.28□□□□□ -1.08
ITGB1-209ENST00000472147 PEAK1Q9H792 1746 aa8.28□□□□□ -1.08
ITGB1-209ENST00000472147 CPSF1Q10570 1443 aaKnown RBP8.28□□□□□ -1.08
ITGB1-209ENST00000472147 NRKQ7Z2Y5 1582 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 PROX2Q3B8N5 592 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 ANKRD24Q8TF21 1146 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 IP6K1Q92551 441 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
ITGB1-209ENST00000472147 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-209ENST00000472147 PHRF1Q9P1Y6 1649 aaKnown RBP8.27□□□□□ -1.09
ITGB1-209ENST00000472147 RGPD3A6NKT7 1758 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-209ENST00000472147 RGPD4Q7Z3J3 1758 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 PNPLA7Q6ZV29 1317 aa8.27□□□□□ -1.09
ITGB1-209ENST00000472147 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
ITGB1-209ENST00000472147 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
ITGB1-209ENST00000472147 CASZ1Q86V15 1759 aa8.26□□□□□ -1.09
ITGB1-209ENST00000472147 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
ITGB1-209ENST00000472147 HSPA6P17066 643 aa8.26□□□□□ -1.09
ITGB1-209ENST00000472147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.26□□□□□ -1.09
ITGB1-209ENST00000472147 KRI1Q8N9T8 703 aaKnown RBP8.26□□□□□ -1.09
ITGB1-209ENST00000472147 NLGN2Q8NFZ4 835 aa8.26□□□□□ -1.09
ITGB1-209ENST00000472147 L3MBTL2Q969R5 705 aa8.26□□□□□ -1.09
ITGB1-209ENST00000472147 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
ITGB1-209ENST00000472147 SLIT3O75094 1523 aa8.25□□□□□ -1.09
ITGB1-209ENST00000472147 HRO43593 1189 aa8.25□□□□□ -1.09
ITGB1-209ENST00000472147 YBX3P16989 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
ITGB1-209ENST00000472147 HDGFL2Q7Z4V5 671 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-209ENST00000472147 COL23A1Q86Y22 540 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-209ENST00000472147 ZCRB1Q8TBF4 217 aaKnown RBP8.25□□□□□ -1.09
ITGB1-209ENST00000472147 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
ITGB1-209ENST00000472147 VPS9D1Q9Y2B5 631 aa8.25□□□□□ -1.09
ITGB1-209ENST00000472147 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
ITGB1-209ENST00000472147 TK2O00142 265 aa8.24□□□□□ -1.09
ITGB1-209ENST00000472147 SYTL4Q96C24 671 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-209ENST00000472147 AK7Q96M32 723 aa8.24□□□□□ -1.09
ITGB1-209ENST00000472147 CCNL1Q9UK58 526 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-209ENST00000472147 ADGRG1Q9Y653 693 aa8.24□□□□□ -1.09
ITGB1-209ENST00000472147 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
ITGB1-209ENST00000472147 CHD4Q14839 1912 aa8.23□□□□□ -1.09
ITGB1-209ENST00000472147 TNS2Q63HR2 1409 aa8.23□□□□□ -1.09
ITGB1-209ENST00000472147 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
ITGB1-209ENST00000472147 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
ITGB1-209ENST00000472147 CGNL1Q0VF96 1302 aa8.23□□□□□ -1.09
ITGB1-209ENST00000472147 COL18A1P39060 1754 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 TRIM66O15016 1216 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 KCNQ4P56696 695 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 NME9Q86XW9 330 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 SLC12A5Q9H2X9 1139 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 KIAA1468Q9P260 1216 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
ITGB1-209ENST00000472147 MYOM1P52179 1685 aa8.21□□□□□ -1.09
ITGB1-209ENST00000472147 ARHGEF28Q8N1W1 1705 aaKnown RBP8.21□□□□□ -1.09
ITGB1-209ENST00000472147 APLP1P51693 650 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 PACS2Q86VP3 889 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 DNAJC5GQ8N7S2 189 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 TATDN2Q93075 761 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 EYA1Q99502 592 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 LRRC37A3O60309 1634 aa8.21□□□□□ -1.1
ITGB1-209ENST00000472147 PCNTO95613 3336 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 ABCC6O95255 1503 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 BHMG1C9JSJ3 638 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-209ENST00000472147 OATP04181 439 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 AMPHP49418 695 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 PXYLP1Q8TE99 480 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-209ENST00000472147 LTV1Q96GA3 475 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms