RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 USP3Q9Y6I4 520 aa11.73□□□□□ -0.53
MDH1-210ENST00000472098 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 FIGNL2A6NMB9 653 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 C21orf2O43822 256 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 PRMT3O60678 531 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 IGFBP4P22692 258 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 OCLNQ16625 522 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 RHBDD1Q8TEB9 315 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 PRIMPOLQ96LW4 560 aa11.72□□□□□ -0.53
MDH1-210ENST00000472098 ATP2B4P23634 1241 aa11.71□□□□□ -0.53
MDH1-210ENST00000472098 TBCELQ5QJ74 424 aa11.71□□□□□ -0.53
MDH1-210ENST00000472098 PRICKLE2Q7Z3G6 844 aa11.71□□□□□ -0.53
MDH1-210ENST00000472098 NIFKQ9BYG3 293 aaKnown RBP11.71□□□□□ -0.53
MDH1-210ENST00000472098 DNMT3LQ9UJW3 386 aa11.71□□□□□ -0.53
MDH1-210ENST00000472098 MAN1A2O60476 641 aa11.7□□□□□ -0.54
MDH1-210ENST00000472098 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
MDH1-210ENST00000472098 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
MDH1-210ENST00000472098 SSFA2P28290 1259 aa11.69□□□□□ -0.54
MDH1-210ENST00000472098 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
MDH1-210ENST00000472098 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.546e-11■□□□□ 9.6
MDH1-210ENST00000472098 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
MDH1-210ENST00000472098 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
MDH1-210ENST00000472098 STAG2Q8N3U4 1231 aa11.69□□□□□ -0.54
MDH1-210ENST00000472098 CABP1Q9NZU7 370 aa11.69□□□□□ -0.54
MDH1-210ENST00000472098 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
MDH1-210ENST00000472098 POU4F2Q12837 409 aa11.68□□□□□ -0.54
MDH1-210ENST00000472098 TEAD4Q15561 434 aa11.68□□□□□ -0.54
MDH1-210ENST00000472098 C4orf17Q53FE4 359 aa11.68□□□□□ -0.54
MDH1-210ENST00000472098 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
MDH1-210ENST00000472098 FOXO3O43524 673 aa11.67□□□□□ -0.54
MDH1-210ENST00000472098 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
MDH1-210ENST00000472098 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
MDH1-210ENST00000472098 C1orf216Q8TAB5 229 aa11.66□□□□□ -0.54
MDH1-210ENST00000472098 ZDHHC1Q8WTX9 485 aa11.66□□□□□ -0.54
MDH1-210ENST00000472098 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
MDH1-210ENST00000472098 C2orf49Q9BVC5 232 aaPredicted RBP11.66□□□□□ -0.54
MDH1-210ENST00000472098 SERTM1A2A2V5 107 aa11.65□□□□□ -0.54
MDH1-210ENST00000472098 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
MDH1-210ENST00000472098 BRD1O95696 1058 aa11.65□□□□□ -0.54
MDH1-210ENST00000472098 RHOQP17081 205 aa11.65□□□□□ -0.54
MDH1-210ENST00000472098 NOS2P35228 1153 aa11.65□□□□□ -0.54
MDH1-210ENST00000472098 FKBP5Q13451 457 aaPredicted RBP11.65□□□□□ -0.54
MDH1-210ENST00000472098 PHLDB3Q6NSJ2 640 aa11.65□□□□□ -0.54
MDH1-210ENST00000472098 EML1O00423 815 aa11.64□□□□□ -0.55
MDH1-210ENST00000472098 PLA2G4AP47712 749 aa11.64□□□□□ -0.55
MDH1-210ENST00000472098 HIRAP54198 1017 aaPredicted RBP11.64□□□□□ -0.55
MDH1-210ENST00000472098 SUZ12Q15022 739 aaKnown RBP11.64□□□□□ -0.55
MDH1-210ENST00000472098 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
MDH1-210ENST00000472098 ZNF232Q9UNY5 417 aa11.64□□□□□ -0.55
MDH1-210ENST00000472098 PHKA2P46019 1235 aa11.63□□□□□ -0.55
MDH1-210ENST00000472098 KCNMA1Q12791 1236 aa11.63□□□□□ -0.55
MDH1-210ENST00000472098 PARP3Q9Y6F1 533 aa11.63□□□□□ -0.55
MDH1-210ENST00000472098 KRT76Q01546 638 aa11.62□□□□□ -0.55
MDH1-210ENST00000472098 TIMMDC1Q9NPL8 285 aa11.62□□□□□ -0.55
MDH1-210ENST00000472098 COL26A1Q96A83 441 aa11.61□□□□□ -0.55
MDH1-210ENST00000472098 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
MDH1-210ENST00000472098 NBPF1Q3BBV0 1214 aa11.6□□□□□ -0.55
MDH1-210ENST00000472098 SH3PXD2AQ5TCZ1 1133 aa11.6□□□□□ -0.55
MDH1-210ENST00000472098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.6□□□□□ -0.55
MDH1-210ENST00000472098 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
MDH1-210ENST00000472098 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
MDH1-210ENST00000472098 PTSQ03393 145 aa11.59□□□□□ -0.55
MDH1-210ENST00000472098 GPR161Q8N6U8 529 aaKnown RBP11.59□□□□□ -0.55
MDH1-210ENST00000472098 AIDAQ96BJ3 306 aa11.59□□□□□ -0.55
MDH1-210ENST00000472098 ZDHHC3Q9NYG2 299 aa11.59□□□□□ -0.55
MDH1-210ENST00000472098 DYRK1BQ9Y463 629 aa11.59□□□□□ -0.55
MDH1-210ENST00000472098 SENP3-EIF4A1A0A087X0R7 540 aa11.58□□□□□ -0.56
MDH1-210ENST00000472098 KCTD17Q8N5Z5 321 aa11.58□□□□□ -0.56
MDH1-210ENST00000472098 MKNK1Q9BUB5 465 aa11.58□□□□□ -0.56
MDH1-210ENST00000472098 HCN4Q9Y3Q4 1203 aa11.58□□□□□ -0.56
MDH1-210ENST00000472098 TXLNAP40222 546 aa11.57□□□□□ -0.56
MDH1-210ENST00000472098 C1orf53Q5VUE5 145 aa11.57□□□□□ -0.56
MDH1-210ENST00000472098 SLC35F4A4IF30 521 aa11.56□□□□□ -0.56
MDH1-210ENST00000472098 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
MDH1-210ENST00000472098 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
MDH1-210ENST00000472098 SCNN1AP37088 669 aa11.56□□□□□ -0.56
MDH1-210ENST00000472098 KCNA1Q09470 495 aa11.56□□□□□ -0.56
MDH1-210ENST00000472098 CAPN12Q6ZSI9 719 aa11.56□□□□□ -0.56
MDH1-210ENST00000472098 PHACTR1Q9C0D0 580 aa11.56□□□□□ -0.56
MDH1-210ENST00000472098 MTMR7Q9Y216 660 aa11.56□□□□□ -0.56
MDH1-210ENST00000472098 MSX1P28360 303 aa11.55□□□□□ -0.56
MDH1-210ENST00000472098 ALDH16A1Q8IZ83 802 aa11.55□□□□□ -0.56
MDH1-210ENST00000472098 F11P03951 625 aa11.54□□□□□ -0.56
MDH1-210ENST00000472098 ATP4AP20648 1035 aa11.54□□□□□ -0.56
MDH1-210ENST00000472098 NGLY1Q96IV0 654 aa11.54□□□□□ -0.56
MDH1-210ENST00000472098 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
MDH1-210ENST00000472098 RTN1Q16799 776 aa11.53□□□□□ -0.56
MDH1-210ENST00000472098 TXNDC2Q86VQ3 553 aa11.53□□□□□ -0.56
MDH1-210ENST00000472098 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
MDH1-210ENST00000472098 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
MDH1-210ENST00000472098 MYO19Q96H55 970 aa11.53□□□□□ -0.56
MDH1-210ENST00000472098 QTRT2Q9H974 415 aaKnown RBP11.53□□□□□ -0.56
MDH1-210ENST00000472098 SEPT3Q9UH03 358 aa11.53□□□□□ -0.56
MDH1-210ENST00000472098 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
MDH1-210ENST00000472098 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
MDH1-210ENST00000472098 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
MDH1-210ENST00000472098 GNEQ9Y223 722 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms