RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
SYN3-211ENST00000472027 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
SYN3-211ENST00000472027 GYS1P13807 737 aa12.06□□□□□ -0.48
SYN3-211ENST00000472027 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
SYN3-211ENST00000472027 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
SYN3-211ENST00000472027 USP16Q9Y5T5 823 aa12.06□□□□□ -0.48
SYN3-211ENST00000472027 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
SYN3-211ENST00000472027 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
SYN3-211ENST00000472027 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
SYN3-211ENST00000472027 PRAMEF22A3QJZ6 481 aa12.05□□□□□ -0.48
SYN3-211ENST00000472027 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
SYN3-211ENST00000472027 A1BGP04217 495 aa12.05□□□□□ -0.48
SYN3-211ENST00000472027 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
SYN3-211ENST00000472027 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
SYN3-211ENST00000472027 UBR2Q8IWV8 1755 aa12.05□□□□□ -0.48
SYN3-211ENST00000472027 ZPR1O75312 459 aa12.04□□□□□ -0.48
SYN3-211ENST00000472027 MMP10P09238 476 aa12.04□□□□□ -0.48
SYN3-211ENST00000472027 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
SYN3-211ENST00000472027 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
SYN3-211ENST00000472027 FKBP8Q14318 412 aa12.03□□□□□ -0.48
SYN3-211ENST00000472027 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
SYN3-211ENST00000472027 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
SYN3-211ENST00000472027 NARFQ9UHQ1 456 aa12.03□□□□□ -0.48
SYN3-211ENST00000472027 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
SYN3-211ENST00000472027 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
SYN3-211ENST00000472027 DLG5Q8TDM6 1919 aa12.02□□□□□ -0.49
SYN3-211ENST00000472027 APAF1O14727 1248 aa12.02□□□□□ -0.49
SYN3-211ENST00000472027 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
SYN3-211ENST00000472027 EIF4A1P60842 406 aaKnown RBP12.02□□□□□ -0.49
SYN3-211ENST00000472027 TSPYL4Q9UJ04 414 aa12.02□□□□□ -0.49
SYN3-211ENST00000472027 ZNF330Q9Y3S2 320 aaPredicted RBP12.02□□□□□ -0.49
SYN3-211ENST00000472027 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
SYN3-211ENST00000472027 COL15A1P39059 1388 aa12.02□□□□□ -0.49
SYN3-211ENST00000472027 A0A087WZG4 1122 aa12.01□□□□□ -0.49
SYN3-211ENST00000472027 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
SYN3-211ENST00000472027 TM4SF1P30408 202 aa12.01□□□□□ -0.49
SYN3-211ENST00000472027 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
SYN3-211ENST00000472027 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
SYN3-211ENST00000472027 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
SYN3-211ENST00000472027 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
SYN3-211ENST00000472027 GPR162Q16538 588 aa12□□□□□ -0.49
SYN3-211ENST00000472027 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
SYN3-211ENST00000472027 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
SYN3-211ENST00000472027 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
SYN3-211ENST00000472027 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
SYN3-211ENST00000472027 NBPF26B4DH59 902 aa11.98□□□□□ -0.49
SYN3-211ENST00000472027 POLRMTO00411 1230 aaKnown RBP11.98□□□□□ -0.49
SYN3-211ENST00000472027 CHL1O00533 1208 aa11.98□□□□□ -0.49
SYN3-211ENST00000472027 DDR1Q08345 913 aa11.98□□□□□ -0.49
SYN3-211ENST00000472027 NFIXQ14938 502 aa11.98□□□□□ -0.49
SYN3-211ENST00000472027 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
SYN3-211ENST00000472027 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
SYN3-211ENST00000472027 NBPF15Q8N660 670 aa11.98□□□□□ -0.49
SYN3-211ENST00000472027 TGFB2P61812 414 aa11.97□□□□□ -0.49
SYN3-211ENST00000472027 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
SYN3-211ENST00000472027 CAMTA2O94983 1202 aa11.96□□□□□ -0.49
SYN3-211ENST00000472027 SERPINB2P05120 415 aa11.96□□□□□ -0.49
SYN3-211ENST00000472027 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
SYN3-211ENST00000472027 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
SYN3-211ENST00000472027 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
SYN3-211ENST00000472027 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
SYN3-211ENST00000472027 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
SYN3-211ENST00000472027 A0A0G2JLW4 131 aa11.95□□□□□ -0.5
SYN3-211ENST00000472027 YBX3P16989 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
SYN3-211ENST00000472027 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
SYN3-211ENST00000472027 NGEFQ8N5V2 710 aa11.95□□□□□ -0.5
SYN3-211ENST00000472027 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
SYN3-211ENST00000472027 ZNF853P0CG23 659 aa11.94□□□□□ -0.5
SYN3-211ENST00000472027 MYL6BP14649 208 aa11.94□□□□□ -0.5
SYN3-211ENST00000472027 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
SYN3-211ENST00000472027 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
SYN3-211ENST00000472027 WWC3Q9ULE0 1092 aa11.94□□□□□ -0.5
SYN3-211ENST00000472027 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
SYN3-211ENST00000472027 DPEP1P16444 411 aa11.93□□□□□ -0.5
SYN3-211ENST00000472027 YY1P25490 414 aa11.93□□□□□ -0.5
SYN3-211ENST00000472027 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
SYN3-211ENST00000472027 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
SYN3-211ENST00000472027 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
SYN3-211ENST00000472027 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
SYN3-211ENST00000472027 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 KCNA3P22001 575 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 GNAI1P63096 354 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 PDIA6Q15084 440 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 HLFQ16534 295 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 ZNF652Q9Y2D9 606 aa11.92□□□□□ -0.5
SYN3-211ENST00000472027 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
SYN3-211ENST00000472027 RGL2O15211 777 aa11.91□□□□□ -0.5
SYN3-211ENST00000472027 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
SYN3-211ENST00000472027 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
SYN3-211ENST00000472027 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
SYN3-211ENST00000472027 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
SYN3-211ENST00000472027 ANXA1P04083 346 aa11.9□□□□□ -0.5
SYN3-211ENST00000472027 CHRNA5P30532 468 aa11.9□□□□□ -0.5
SYN3-211ENST00000472027 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
SYN3-211ENST00000472027 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
SYN3-211ENST00000472027 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
SYN3-211ENST00000472027 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 267.6 ms