RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
SEMA3A-206ENST00000471474 SLC35F4A4IF30 521 aa9.51□□□□□ -0.89
SEMA3A-206ENST00000471474 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
SEMA3A-206ENST00000471474 EFHC2Q5JST6 749 aa9.51□□□□□ -0.89
SEMA3A-206ENST00000471474 IRF7Q92985 503 aa9.51□□□□□ -0.89
SEMA3A-206ENST00000471474 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
SEMA3A-206ENST00000471474 ITGA6P23229 1130 aa9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 SV2AQ7L0J3 742 aa9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 TSPAN10Q9H1Z9 355 aaPredicted RBP9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
SEMA3A-206ENST00000471474 LGR5O75473 907 aa9.49□□□□□ -0.89
SEMA3A-206ENST00000471474 WFS1O76024 890 aa9.49□□□□□ -0.89
SEMA3A-206ENST00000471474 NOS2P35228 1153 aa9.49□□□□□ -0.89
SEMA3A-206ENST00000471474 TRERF1Q96PN7 1200 aa9.49□□□□□ -0.89
SEMA3A-206ENST00000471474 PDE4CQ08493 712 aa9.48□□□□□ -0.89
SEMA3A-206ENST00000471474 C1orf216Q8TAB5 229 aa9.48□□□□□ -0.89
SEMA3A-206ENST00000471474 GMCL1Q96IK5 515 aa9.48□□□□□ -0.89
SEMA3A-206ENST00000471474 MSX1P28360 303 aa9.47□□□□□ -0.89
SEMA3A-206ENST00000471474 TEAD4Q15561 434 aa9.47□□□□□ -0.89
SEMA3A-206ENST00000471474 SWI5Q1ZZU3 235 aa9.47□□□□□ -0.89
SEMA3A-206ENST00000471474 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
SEMA3A-206ENST00000471474 H3BM21 787 aa9.46□□□□□ -0.9
SEMA3A-206ENST00000471474 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
SEMA3A-206ENST00000471474 NGLY1Q96IV0 654 aa9.46□□□□□ -0.9
SEMA3A-206ENST00000471474 ARXQ96QS3 562 aa9.46□□□□□ -0.9
SEMA3A-206ENST00000471474 RUBCNLQ9H714 662 aa9.46□□□□□ -0.9
SEMA3A-206ENST00000471474 HCN4Q9Y3Q4 1203 aa9.46□□□□□ -0.9
SEMA3A-206ENST00000471474 PRMT3O60678 531 aa9.45□□□□□ -0.9
SEMA3A-206ENST00000471474 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
SEMA3A-206ENST00000471474 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
SEMA3A-206ENST00000471474 STK32AQ8WU08 396 aa9.45□□□□□ -0.9
SEMA3A-206ENST00000471474 ZDHHC3Q9NYG2 299 aa9.45□□□□□ -0.9
SEMA3A-206ENST00000471474 IQSEC3Q9UPP2 1182 aaPredicted RBP9.45□□□□□ -0.9
SEMA3A-206ENST00000471474 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
SEMA3A-206ENST00000471474 IGFBP4P22692 258 aa9.44□□□□□ -0.9
SEMA3A-206ENST00000471474 FOXK2Q01167 660 aa9.44□□□□□ -0.9
SEMA3A-206ENST00000471474 TMEM164Q5U3C3 297 aa9.44□□□□□ -0.9
SEMA3A-206ENST00000471474 PRIMPOLQ96LW4 560 aa9.44□□□□□ -0.9
SEMA3A-206ENST00000471474 PHF24Q9UPV7 400 aa9.44□□□□□ -0.9
SEMA3A-206ENST00000471474 DKK1O94907 266 aa9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 EPHA4P54764 986 aa9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 HIF1AQ16665 826 aa9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 ZMIZ1Q9ULJ6 1067 aa9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
SEMA3A-206ENST00000471474 LBRQ14739 615 aaKnown RBP9.42□□□□□ -0.9
SEMA3A-206ENST00000471474 TREML4Q6UXN2 200 aa9.42□□□□□ -0.9
SEMA3A-206ENST00000471474 ANKIB1Q9P2G1 1089 aa9.42□□□□□ -0.9
SEMA3A-206ENST00000471474 FOXO3O43524 673 aa9.41□□□□□ -0.9
SEMA3A-206ENST00000471474 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
SEMA3A-206ENST00000471474 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
SEMA3A-206ENST00000471474 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
SEMA3A-206ENST00000471474 A0A1W2PNR3 127 aa9.4□□□□□ -0.9
SEMA3A-206ENST00000471474 TXLNAP40222 546 aa9.4□□□□□ -0.9
SEMA3A-206ENST00000471474 DBN1Q16643 649 aa9.4□□□□□ -0.9
SEMA3A-206ENST00000471474 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
SEMA3A-206ENST00000471474 NFX1Q12986 1120 aaKnown RBP9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 C1orf53Q5VUE5 145 aa9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 ALDH16A1Q8IZ83 802 aa9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 MTMR7Q9Y216 660 aa9.39□□□□□ -0.91
SEMA3A-206ENST00000471474 EML1O00423 815 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 WEE1P30291 646 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 NLRP8Q86W28 1048 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 CRISPLD1Q9H336 500 aa9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
SEMA3A-206ENST00000471474 GPR25O00155 361 aa9.37□□□□□ -0.91
SEMA3A-206ENST00000471474 LRRC69Q6ZNQ3 347 aa9.37□□□□□ -0.91
SEMA3A-206ENST00000471474 CLP1Q92989 425 aaKnown RBP9.37□□□□□ -0.91
SEMA3A-206ENST00000471474 KHNYNO15037 678 aaKnown RBP9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 C21orf2O43822 256 aa9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 PTCD1O75127 700 aaKnown RBP9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 SH3PXD2AQ5TCZ1 1133 aa9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 ZIC5Q96T25 663 aa9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
SEMA3A-206ENST00000471474 ATP4AP20648 1035 aa9.35□□□□□ -0.91
SEMA3A-206ENST00000471474 HIRAP54198 1017 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-206ENST00000471474 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-206ENST00000471474 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
SEMA3A-206ENST00000471474 MX2P20592 715 aa9.34□□□□□ -0.91
SEMA3A-206ENST00000471474 RTN1Q16799 776 aa9.34□□□□□ -0.91
SEMA3A-206ENST00000471474 ZCCHC2Q9C0B9 1178 aaKnown RBP9.34□□□□□ -0.91
SEMA3A-206ENST00000471474 CXXC1Q9P0U4 656 aaPredicted RBP9.34□□□□□ -0.91
SEMA3A-206ENST00000471474 ERBB4Q15303 1308 aa9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 GMPRP36959 345 aa9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 FKBP5Q13451 457 aaPredicted RBP9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 CEP63Q96MT8 703 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms