RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 TMC6Q7Z403 805 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 KIF2AO00139 706 aaPredicted RBP13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 TCERG1LQ5VWI1 586 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 ZWINTO95229 277 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 PRC1O43663 620 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 YEATS4O95619 227 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 FEZ1Q99689 392 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 C8orf76Q96K31 380 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 IKBKGQ9Y6K9 419 aa13.22□□□□□ -0.29
SLC44A1-205ENST00000470972 C6orf163Q5TEZ5 329 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 MYO1BO43795 1136 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 SPECC1LQ69YQ0 1117 aa13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 DZIP1Q86YF9 867 aaKnown RBP13.21□□□□□ -0.29
SLC44A1-205ENST00000470972 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.3
SLC44A1-205ENST00000470972 OTUD6BQ8N6M0 293 aa13.21□□□□□ -0.3
SLC44A1-205ENST00000470972 JADE2Q9NQC1 790 aa13.21□□□□□ -0.3
SLC44A1-205ENST00000470972 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.3
SLC44A1-205ENST00000470972 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.3
SLC44A1-205ENST00000470972 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 CEP112Q8N8E3 955 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 C11orf95C9JLR9 678 aaPredicted RBP13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 CNNM3Q8NE01 707 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 FBF1Q8TES7 1133 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 NAPBQ9H115 298 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 BOLA2Q9H3K6 86 aa13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 RRS1Q15050 365 aaKnown RBP13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 ZNF526Q8TF50 670 aaPredicted RBP13.2□□□□□ -0.3
SLC44A1-205ENST00000470972 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 NAA15Q9BXJ9 866 aaKnown RBP13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 DAAM2Q86T65 1068 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 BACH2Q9BYV9 841 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 MNAT1P51948 309 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 RAB3IL1Q8TBN0 382 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 PSMC4P43686 418 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 NLRP5P59047 1200 aa13.19□□□□□ -0.3
SLC44A1-205ENST00000470972 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 ZNF287Q9HBT7 754 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 SAMM50Q9Y512 469 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 PTPRGP23470 1445 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 BICD1Q96G01 975 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 CCDC6Q16204 474 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 CTCFLQ8NI51 663 aaPredicted RBP13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 HSF2BPO75031 334 aa13.18□□□□□ -0.3
SLC44A1-205ENST00000470972 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 CCDC194A0A1B0GVG4 234 aa13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 ZNF444Q8N0Y2 327 aaPredicted RBP13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 RAB34Q9BZG1 259 aa13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 PNISRQ8TF01 805 aaKnown RBP13.17□□□□□ -0.3
SLC44A1-205ENST00000470972 CETN1Q12798 172 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 A0A087WZG4 1122 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 FYCO1Q9BQS8 1478 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 TMEM110-MUSTN1A8MSY1 372 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 GJC1P36383 396 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 ZPR1O75312 459 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 IDEP14735 1019 aa13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
SLC44A1-205ENST00000470972 TMEM57Q8N5G2 664 aa13.15□□□□□ -0.3
SLC44A1-205ENST00000470972 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
SLC44A1-205ENST00000470972 CFAP70Q5T0N1 1121 aa13.15□□□□□ -0.3
SLC44A1-205ENST00000470972 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
SLC44A1-205ENST00000470972 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
SLC44A1-205ENST00000470972 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms