RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
NXF3-205ENST00000470724 ADRA2BP18089 450 aa12.56□□□□□ -0.4
NXF3-205ENST00000470724 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
NXF3-205ENST00000470724 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
NXF3-205ENST00000470724 MIER1Q8N108 512 aa12.56□□□□□ -0.4
NXF3-205ENST00000470724 NGEFQ8N5V2 710 aa12.56□□□□□ -0.4
NXF3-205ENST00000470724 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
NXF3-205ENST00000470724 SRP68Q9UHB9 627 aaKnown RBP12.56□□□□□ -0.4
NXF3-205ENST00000470724 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
NXF3-205ENST00000470724 ADAMTS7Q9UKP4 1686 aa12.56□□□□□ -0.4
NXF3-205ENST00000470724 A0A087WZG4 1122 aa12.55□□□□□ -0.4
NXF3-205ENST00000470724 CCER2I3L3R5 266 aa12.55□□□□□ -0.4
NXF3-205ENST00000470724 GNAI1P63096 354 aa12.55□□□□□ -0.4
NXF3-205ENST00000470724 PTGER2P43116 358 aa12.54□□□□□ -0.4
NXF3-205ENST00000470724 SOS1Q07889 1333 aaPredicted RBP12.54□□□□□ -0.4
NXF3-205ENST00000470724 COL15A1P39059 1388 aa12.54□□□□□ -0.4
NXF3-205ENST00000470724 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
NXF3-205ENST00000470724 MYL6BP14649 208 aa12.53□□□□□ -0.4
NXF3-205ENST00000470724 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
NXF3-205ENST00000470724 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
NXF3-205ENST00000470724 BABAM1Q9NWV8 329 aa12.53□□□□□ -0.4
NXF3-205ENST00000470724 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
NXF3-205ENST00000470724 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
NXF3-205ENST00000470724 CHL1O00533 1208 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 MMP10P09238 476 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
NXF3-205ENST00000470724 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 PARP3Q9Y6F1 533 aa12.52□□□□□ -0.41
NXF3-205ENST00000470724 TJP1Q07157 1748 aa12.51□□□□□ -0.41
NXF3-205ENST00000470724 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
NXF3-205ENST00000470724 NPHP1O15259 732 aa12.51□□□□□ -0.41
NXF3-205ENST00000470724 GYS1P13807 737 aa12.51□□□□□ -0.41
NXF3-205ENST00000470724 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
NXF3-205ENST00000470724 FKBP8Q14318 412 aa12.51□□□□□ -0.41
NXF3-205ENST00000470724 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
NXF3-205ENST00000470724 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
NXF3-205ENST00000470724 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
NXF3-205ENST00000470724 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
NXF3-205ENST00000470724 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
NXF3-205ENST00000470724 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
NXF3-205ENST00000470724 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
NXF3-205ENST00000470724 TAF1LQ8IZX4 1826 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 LRP5O75197 1615 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 HDGFL1Q5TGJ6 251 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
NXF3-205ENST00000470724 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
NXF3-205ENST00000470724 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
NXF3-205ENST00000470724 ANXA1P04083 346 aa12.48□□□□□ -0.41
NXF3-205ENST00000470724 AIMP1Q12904 312 aaKnown RBP12.48□□□□□ -0.41
NXF3-205ENST00000470724 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
NXF3-205ENST00000470724 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
NXF3-205ENST00000470724 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
NXF3-205ENST00000470724 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
NXF3-205ENST00000470724 COL5A3P25940 1745 aaPredicted RBP12.48□□□□□ -0.41
NXF3-205ENST00000470724 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
NXF3-205ENST00000470724 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
NXF3-205ENST00000470724 SYT17Q9BSW7 474 aa12.47□□□□□ -0.41
NXF3-205ENST00000470724 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
NXF3-205ENST00000470724 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
NXF3-205ENST00000470724 UBR2Q8IWV8 1755 aa12.47□□□□□ -0.41
NXF3-205ENST00000470724 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
NXF3-205ENST00000470724 WDR63Q8IWG1 891 aa12.46□□□□□ -0.41
NXF3-205ENST00000470724 ZBTB3Q9H5J0 574 aa12.46□□□□□ -0.41
NXF3-205ENST00000470724 MYH16Q9H6N6 1097 aa12.46□□□□□ -0.41
NXF3-205ENST00000470724 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
NXF3-205ENST00000470724 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
NXF3-205ENST00000470724 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 IL16Q14005 1332 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 NFIXQ14938 502 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 PROSER3Q2NL68 480 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 SRCAPQ6ZRS2 3230 aa12.45□□□□□ -0.42
NXF3-205ENST00000470724 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 FANCIQ9NVI1 1328 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 KDM3BQ7LBC6 1761 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
NXF3-205ENST00000470724 HOXB7P09629 217 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 DDR1Q08345 913 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 GPR162Q16538 588 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 XAGE3Q8WTP9 111 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
NXF3-205ENST00000470724 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
NXF3-205ENST00000470724 SERPINB2P05120 415 aa12.43□□□□□ -0.42
NXF3-205ENST00000470724 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
NXF3-205ENST00000470724 TWISTNBQ3B726 338 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms