RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 R3HDM1Q15032 1099 aaKnown RBP11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 RC3H1Q5TC82 1133 aaKnown RBP11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 NBPF10Q6P3W6 841 aaKnown RBP11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 TRMT2AQ8IZ69 625 aaKnown RBP11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 NBPF15Q8N660 670 aa11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 KIF13BQ9NQT8 1826 aa11.41□□□□□ -0.58
TGFBR3-206ENST00000470600 IL16Q14005 1332 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 UTRNP46939 3433 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 PSDA5PKW4 1024 aaPredicted RBP11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 LMOD3Q0VAK6 560 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 PDIA6Q15084 440 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 COL23A1Q86Y22 540 aaPredicted RBP11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 ZBTB1Q9Y2K1 713 aa11.4□□□□□ -0.58
TGFBR3-206ENST00000470600 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
TGFBR3-206ENST00000470600 AFDNP55196 1824 aaKnown RBP11.39□□□□□ -0.59
TGFBR3-206ENST00000470600 ANKRD36CQ5JPF3 1778 aa11.39□□□□□ -0.59
TGFBR3-206ENST00000470600 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 NUP98P52948 1817 aa11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 PTGER2P43116 358 aa11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 EIF5P55010 431 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 FMNL2Q96PY5 1086 aa11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 BCL2L12Q9HB09 334 aa11.38□□□□□ -0.59
TGFBR3-206ENST00000470600 ARFGEF2Q9Y6D5 1785 aa11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 RPS6KA4O75676 772 aa11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 PROSER3Q2NL68 480 aa11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 WDR63Q8IWG1 891 aa11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 COL15A1P39059 1388 aa11.37□□□□□ -0.59
TGFBR3-206ENST00000470600 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 A1BGP04217 495 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 SSFA2P28290 1259 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 NGEFQ8N5V2 710 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 CACNA1FO60840 1977 aa11.36□□□□□ -0.59
TGFBR3-206ENST00000470600 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 PIP4K2AP48426 406 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 STK32BQ9NY57 414 aa11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-206ENST00000470600 GNPATO15228 680 aa11.34□□□□□ -0.59
TGFBR3-206ENST00000470600 NEFMP07197 916 aa11.34□□□□□ -0.59
TGFBR3-206ENST00000470600 GNAI1P63096 354 aa11.34□□□□□ -0.59
TGFBR3-206ENST00000470600 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
TGFBR3-206ENST00000470600 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
TGFBR3-206ENST00000470600 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
TGFBR3-206ENST00000470600 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 CAMTA2O94983 1202 aa11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 HOXB7P09629 217 aa11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 GYS1P13807 737 aa11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 SRP68Q9UHB9 627 aaKnown RBP11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
TGFBR3-206ENST00000470600 DLEC1Q9Y238 1755 aa11.32□□□□□ -0.6
TGFBR3-206ENST00000470600 IL6STP40189 918 aaPredicted RBP11.32□□□□□ -0.6
TGFBR3-206ENST00000470600 SALL2Q9Y467 1007 aaPredicted RBP11.32□□□□□ -0.6
TGFBR3-206ENST00000470600 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
TGFBR3-206ENST00000470600 VAMP4O75379 141 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 ANXA1P04083 346 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 DDR1Q08345 913 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 AK7Q96M32 723 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
TGFBR3-206ENST00000470600 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 ZBTB7AO95365 584 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 FKBP8Q14318 412 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 NARFQ9UHQ1 456 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 LAMB2P55268 1798 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 PXDNLA1KZ92 1463 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 COL4A1P02462 1669 aa11.3□□□□□ -0.6
TGFBR3-206ENST00000470600 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 PHF14O94880 888 aa11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 TM4SF1P30408 202 aa11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 EXOSC9Q06265 439 aaKnown RBP11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 MTFR1LQ9H019 292 aa11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
TGFBR3-206ENST00000470600 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
TGFBR3-206ENST00000470600 STARD3NLO95772 234 aa11.28□□□□□ -0.6
TGFBR3-206ENST00000470600 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms