RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 INTS5Q6P9B9 1019 aaKnown RBP21.47■■□□□ 1.03
PKDCC-203ENST00000470578 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
PKDCC-203ENST00000470578 RRP7AQ9Y3A4 280 aaKnown RBP21.47■■□□□ 1.03
PKDCC-203ENST00000470578 STARD3NLO95772 234 aa21.46■■□□□ 1.03
PKDCC-203ENST00000470578 YY1P25490 414 aa21.46■■□□□ 1.03
PKDCC-203ENST00000470578 ZBTB1Q9Y2K1 713 aa21.46■■□□□ 1.03
PKDCC-203ENST00000470578 COL15A1P39059 1388 aa21.46■■□□□ 1.03
PKDCC-203ENST00000470578 NEUROD2Q15784 382 aa21.45■■□□□ 1.02
PKDCC-203ENST00000470578 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
PKDCC-203ENST00000470578 SOS1Q07889 1333 aaPredicted RBP21.45■■□□□ 1.02
PKDCC-203ENST00000470578 PNISRQ8TF01 805 aaKnown RBP21.44■■□□□ 1.02
PKDCC-203ENST00000470578 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
PKDCC-203ENST00000470578 CCDC184Q52MB2 194 aa21.43■■□□□ 1.02
PKDCC-203ENST00000470578 USP42Q9H9J4 1324 aaKnown RBP21.43■■□□□ 1.02
PKDCC-203ENST00000470578 SCN7AQ01118 1682 aa21.43■■□□□ 1.02
PKDCC-203ENST00000470578 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
PKDCC-203ENST00000470578 MRS2Q9HD23 443 aa21.42■■□□□ 1.02
PKDCC-203ENST00000470578 GYS1P13807 737 aa21.41■■□□□ 1.02
PKDCC-203ENST00000470578 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
PKDCC-203ENST00000470578 GOLGB1Q14789 3259 aaKnown RBP21.4■■□□□ 1.02
PKDCC-203ENST00000470578 MMP10P09238 476 aa21.4■■□□□ 1.02
PKDCC-203ENST00000470578 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
PKDCC-203ENST00000470578 ZNF330Q9Y3S2 320 aaPredicted RBP21.4■■□□□ 1.02
PKDCC-203ENST00000470578 BCORQ6W2J9 1755 aa21.39■■□□□ 1.01
PKDCC-203ENST00000470578 PRAMEF22A3QJZ6 481 aa21.39■■□□□ 1.01
PKDCC-203ENST00000470578 ZPR1O75312 459 aa21.39■■□□□ 1.01
PKDCC-203ENST00000470578 NLGN1Q8N2Q7 840 aa21.39■■□□□ 1.01
PKDCC-203ENST00000470578 TSPYL4Q9UJ04 414 aa21.38■■□□□ 1.01
PKDCC-203ENST00000470578 KIF13BQ9NQT8 1826 aa21.38■■□□□ 1.01
PKDCC-203ENST00000470578 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
PKDCC-203ENST00000470578 A1BGP04217 495 aa21.36■■□□□ 1.01
PKDCC-203ENST00000470578 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
PKDCC-203ENST00000470578 NLGN2Q8NFZ4 835 aa21.36■■□□□ 1.01
PKDCC-203ENST00000470578 TRIM35Q9UPQ4 493 aa21.36■■□□□ 1.01
PKDCC-203ENST00000470578 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
PKDCC-203ENST00000470578 A0A087WZG4 1122 aa21.35■■□□□ 1.01
PKDCC-203ENST00000470578 APAF1O14727 1248 aa21.35■■□□□ 1.01
PKDCC-203ENST00000470578 IL6STP40189 918 aaPredicted RBP21.35■■□□□ 1.01
PKDCC-203ENST00000470578 EIF5P55010 431 aaKnown RBP21.35■■□□□ 1.01
PKDCC-203ENST00000470578 FKBP8Q14318 412 aa21.35■■□□□ 1.01
PKDCC-203ENST00000470578 GPR162Q16538 588 aa21.35■■□□□ 1.01
PKDCC-203ENST00000470578 NARFQ9UHQ1 456 aa21.35■■□□□ 1.01
PKDCC-203ENST00000470578 PIP4K2AP48426 406 aaPredicted RBP21.34■■□□□ 1.01
PKDCC-203ENST00000470578 EIF4A1P60842 406 aaKnown RBP21.34■■□□□ 1.01
PKDCC-203ENST00000470578 CD2APQ9Y5K6 639 aa21.34■■□□□ 1.01
PKDCC-203ENST00000470578 UTRNP46939 3433 aa21.34■■□□□ 1.01
PKDCC-203ENST00000470578 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
PKDCC-203ENST00000470578 PARP3Q9Y6F1 533 aa21.33■■□□□ 1.01
PKDCC-203ENST00000470578 C10orf71Q711Q0 1435 aa21.32■■□□□ 1
PKDCC-203ENST00000470578 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
PKDCC-203ENST00000470578 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
PKDCC-203ENST00000470578 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
PKDCC-203ENST00000470578 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
PKDCC-203ENST00000470578 N4BP2Q86UW6 1770 aaPredicted RBP21.31■■□□□ 1
PKDCC-203ENST00000470578 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
PKDCC-203ENST00000470578 DDR1Q08345 913 aa21.3■■□□□ 1
PKDCC-203ENST00000470578 TBC1D2BQ9UPU7 963 aa21.3■■□□□ 1
PKDCC-203ENST00000470578 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
PKDCC-203ENST00000470578 CHD4Q14839 1912 aa21.29■■□□□ 1
PKDCC-203ENST00000470578 DZIP3Q86Y13 1208 aaKnown RBP21.28■■□□□ 1
PKDCC-203ENST00000470578 BCL2L12Q9HB09 334 aa21.28■■□□□ 1
PKDCC-203ENST00000470578 NBPF26B4DH59 902 aa21.27■■□□□ 1
PKDCC-203ENST00000470578 CALD1Q05682 793 aaKnown RBP21.27■■□□□ 1
PKDCC-203ENST00000470578 NBPF10Q6P3W6 841 aaKnown RBP21.27■■□□□ 1
PKDCC-203ENST00000470578 NBPF15Q8N660 670 aa21.27■■□□□ 1
PKDCC-203ENST00000470578 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
PKDCC-203ENST00000470578 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
PKDCC-203ENST00000470578 POLRMTO00411 1230 aaKnown RBP21.26■□□□□ 0.99
PKDCC-203ENST00000470578 CHL1O00533 1208 aa21.26■□□□□ 0.99
PKDCC-203ENST00000470578 NFIXQ14938 502 aa21.26■□□□□ 0.99
PKDCC-203ENST00000470578 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
PKDCC-203ENST00000470578 CAMTA2O94983 1202 aa21.25■□□□□ 0.99
PKDCC-203ENST00000470578 TM4SF1P30408 202 aa21.25■□□□□ 0.99
PKDCC-203ENST00000470578 BICDL1Q6ZP65 573 aa21.25■□□□□ 0.99
PKDCC-203ENST00000470578 CFAP44Q96MT7 982 aa21.25■□□□□ 0.99
PKDCC-203ENST00000470578 NUP98P52948 1817 aa21.23■□□□□ 0.99
PKDCC-203ENST00000470578 MYL6BP14649 208 aa21.23■□□□□ 0.99
PKDCC-203ENST00000470578 YBX3P16989 372 aaKnown RBP eCLIP21.23■□□□□ 0.99
PKDCC-203ENST00000470578 EIF2S2P20042 333 aaKnown RBP21.23■□□□□ 0.99
PKDCC-203ENST00000470578 TBC1D9BQ66K14 1250 aa21.23■□□□□ 0.99
PKDCC-203ENST00000470578 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
PKDCC-203ENST00000470578 ERBB4Q15303 1308 aa21.23■□□□□ 0.99
PKDCC-203ENST00000470578 CARMIL3Q8ND23 1372 aa21.23■□□□□ 0.99
PKDCC-203ENST00000470578 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
PKDCC-203ENST00000470578 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
PKDCC-203ENST00000470578 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
PKDCC-203ENST00000470578 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
PKDCC-203ENST00000470578 WWC3Q9ULE0 1092 aa21.22■□□□□ 0.99
PKDCC-203ENST00000470578 ZNF652Q9Y2D9 606 aa21.22■□□□□ 0.99
PKDCC-203ENST00000470578 GNAI1P63096 354 aa21.21■□□□□ 0.99
PKDCC-203ENST00000470578 ZNF784Q8NCA9 323 aaPredicted RBP21.21■□□□□ 0.99
PKDCC-203ENST00000470578 DLEC1Q9Y238 1755 aa21.2■□□□□ 0.99
PKDCC-203ENST00000470578 ANKRD31Q8N7Z5 1873 aa21.2■□□□□ 0.98
PKDCC-203ENST00000470578 SERPINB2P05120 415 aa21.2■□□□□ 0.98
PKDCC-203ENST00000470578 TGFB2P61812 414 aa21.2■□□□□ 0.98
PKDCC-203ENST00000470578 NECTIN2Q92692 538 aa21.2■□□□□ 0.98
PKDCC-203ENST00000470578 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
PKDCC-203ENST00000470578 ZNF853P0CG23 659 aa21.19■□□□□ 0.98
PKDCC-203ENST00000470578 CCDC27Q2M243 656 aa21.19■□□□□ 0.98
PKDCC-203ENST00000470578 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms