RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 ZBTB1Q9Y2K1 713 aa33.24■■■□□ 2.91
KPNA4-202ENST00000469804 RPS6KA4O75676 772 aa33.23■■■□□ 2.91
KPNA4-202ENST00000469804 FLAD1Q8NFF5 587 aa33.22■■■□□ 2.91
KPNA4-202ENST00000469804 USP16Q9Y5T5 823 aa33.22■■■□□ 2.91
KPNA4-202ENST00000469804 SNRPA1P09661 255 aaKnown RBP33.21■■■□□ 2.91
KPNA4-202ENST00000469804 MTFR1LQ9H019 292 aa33.21■■■□□ 2.91
KPNA4-202ENST00000469804 CHL1O00533 1208 aa33.2■■■□□ 2.91
KPNA4-202ENST00000469804 STARD3NLO95772 234 aa33.2■■■□□ 2.91
KPNA4-202ENST00000469804 TEX13AQ9BXU3 409 aaPredicted RBP33.2■■■□□ 2.91
KPNA4-202ENST00000469804 BABAM1Q9NWV8 329 aa33.2■■■□□ 2.91
KPNA4-202ENST00000469804 CCDC27Q2M243 656 aa33.19■■■□□ 2.9
KPNA4-202ENST00000469804 WWC1Q8IX03 1113 aa33.19■■■□□ 2.9
KPNA4-202ENST00000469804 SPON1Q9HCB6 807 aa33.19■■■□□ 2.9
KPNA4-202ENST00000469804 CANXP27824 592 aaKnown RBP33.18■■■□□ 2.9
KPNA4-202ENST00000469804 MSL1Q68DK7 614 aa33.18■■■□□ 2.9
KPNA4-202ENST00000469804 SOS1Q07889 1333 aaPredicted RBP33.18■■■□□ 2.9
KPNA4-202ENST00000469804 A1BGP04217 495 aa33.17■■■□□ 2.9
KPNA4-202ENST00000469804 TRAPPC3LQ5T215 181 aa33.17■■■□□ 2.9
KPNA4-202ENST00000469804 SLC16A10Q8TF71 515 aa33.17■■■□□ 2.9
KPNA4-202ENST00000469804 ARHGEF1Q92888 912 aaKnown RBP33.17■■■□□ 2.9
KPNA4-202ENST00000469804 CFAP44Q96MT7 982 aa33.17■■■□□ 2.9
KPNA4-202ENST00000469804 GIGYF1O75420 1035 aaPredicted RBP33.16■■■□□ 2.9
KPNA4-202ENST00000469804 PIP4K2AP48426 406 aaPredicted RBP33.16■■■□□ 2.9
KPNA4-202ENST00000469804 ZNF853P0CG23 659 aa33.15■■■□□ 2.9
KPNA4-202ENST00000469804 KRT24Q2M2I5 525 aa33.15■■■□□ 2.9
KPNA4-202ENST00000469804 MBIPQ9NS73 344 aa33.15■■■□□ 2.9
KPNA4-202ENST00000469804 COL15A1P39059 1388 aa33.14■■■□□ 2.9
KPNA4-202ENST00000469804 PTGER2P43116 358 aa33.14■■■□□ 2.9
KPNA4-202ENST00000469804 CALD1Q05682 793 aaKnown RBP33.14■■■□□ 2.9
KPNA4-202ENST00000469804 IFT57Q9NWB7 429 aa33.14■■■□□ 2.9
KPNA4-202ENST00000469804 ADRA2BP18089 450 aa33.13■■■□□ 2.89
KPNA4-202ENST00000469804 GNAI1P63096 354 aa33.12■■■□□ 2.89
KPNA4-202ENST00000469804 NCBP3Q53F19 620 aaKnown RBP33.12■■■□□ 2.89
KPNA4-202ENST00000469804 SGIP1Q9BQI5 828 aa33.11■■■□□ 2.89
KPNA4-202ENST00000469804 SRP68Q9UHB9 627 aaKnown RBP33.11■■■□□ 2.89
KPNA4-202ENST00000469804 ZNF330Q9Y3S2 320 aaPredicted RBP33.11■■■□□ 2.89
KPNA4-202ENST00000469804 RFC4P35249 363 aa33.1■■■□□ 2.89
KPNA4-202ENST00000469804 SCN7AQ01118 1682 aa33.08■■■□□ 2.89
KPNA4-202ENST00000469804 BCORQ6W2J9 1755 aa33.07■■■□□ 2.88
KPNA4-202ENST00000469804 NBPF26B4DH59 902 aa33.07■■■□□ 2.88
KPNA4-202ENST00000469804 EIF5P55010 431 aaKnown RBP33.07■■■□□ 2.88
KPNA4-202ENST00000469804 NBPF10Q6P3W6 841 aaKnown RBP33.07■■■□□ 2.88
KPNA4-202ENST00000469804 NBPF15Q8N660 670 aa33.07■■■□□ 2.88
KPNA4-202ENST00000469804 TSR2Q969E8 191 aaKnown RBP33.07■■■□□ 2.88
KPNA4-202ENST00000469804 USP42Q9H9J4 1324 aaKnown RBP33.06■■■□□ 2.88
KPNA4-202ENST00000469804 IL6STP40189 918 aaPredicted RBP33.06■■■□□ 2.88
KPNA4-202ENST00000469804 GYS1P13807 737 aa33.04■■■□□ 2.88
KPNA4-202ENST00000469804 EIF2S2P20042 333 aaKnown RBP33.04■■■□□ 2.88
KPNA4-202ENST00000469804 SRCAPQ6ZRS2 3230 aa33.03■■■□□ 2.88
KPNA4-202ENST00000469804 NECTIN2Q92692 538 aa33.03■■■□□ 2.88
KPNA4-202ENST00000469804 PPP1R1BQ9UD71 204 aaPredicted RBP33.03■■■□□ 2.88
KPNA4-202ENST00000469804 IL16Q14005 1332 aa33.02■■■□□ 2.88
KPNA4-202ENST00000469804 USPL1Q5W0Q7 1092 aa33.02■■■□□ 2.88
KPNA4-202ENST00000469804 WDR63Q8IWG1 891 aa33.02■■■□□ 2.88
KPNA4-202ENST00000469804 POLD1P28340 1107 aa33.01■■■□□ 2.87
KPNA4-202ENST00000469804 NGEFQ8N5V2 710 aa33.01■■■□□ 2.87
KPNA4-202ENST00000469804 SPINK5Q9NQ38 1064 aaPredicted RBP33■■■□□ 2.87
KPNA4-202ENST00000469804 NARFQ9UHQ1 456 aa33■■■□□ 2.87
KPNA4-202ENST00000469804 TBC1D2BQ9UPU7 963 aa33■■■□□ 2.87
KPNA4-202ENST00000469804 ZNF521Q96K83 1311 aa33■■■□□ 2.87
KPNA4-202ENST00000469804 ZPR1O75312 459 aa32.99■■■□□ 2.87
KPNA4-202ENST00000469804 DUSP27Q5VZP5 1158 aa32.99■■■□□ 2.87
KPNA4-202ENST00000469804 A0A087WZG4 1122 aa32.98■■■□□ 2.87
KPNA4-202ENST00000469804 ELL2O00472 640 aaPredicted RBP32.98■■■□□ 2.87
KPNA4-202ENST00000469804 MYL6BP14649 208 aa32.98■■■□□ 2.87
KPNA4-202ENST00000469804 FKBP8Q14318 412 aa32.98■■■□□ 2.87
KPNA4-202ENST00000469804 ARXQ96QS3 562 aa32.98■■■□□ 2.87
KPNA4-202ENST00000469804 C8orf58Q8NAV2 365 aa32.97■■■□□ 2.87
KPNA4-202ENST00000469804 BCL2L12Q9HB09 334 aa32.97■■■□□ 2.87
KPNA4-202ENST00000469804 FANCIQ9NVI1 1328 aa32.97■■■□□ 2.87
KPNA4-202ENST00000469804 ANXA1P04083 346 aa32.96■■■□□ 2.87
KPNA4-202ENST00000469804 NPM2Q86SE8 214 aaKnown RBP32.96■■■□□ 2.87
KPNA4-202ENST00000469804 PROSER3Q2NL68 480 aa32.95■■■□□ 2.87
KPNA4-202ENST00000469804 DZIP3Q86Y13 1208 aaKnown RBP32.95■■■□□ 2.87
KPNA4-202ENST00000469804 NLGN1Q8N2Q7 840 aa32.95■■■□□ 2.87
KPNA4-202ENST00000469804 MMP10P09238 476 aa32.94■■■□□ 2.86
KPNA4-202ENST00000469804 PDIA6Q15084 440 aa32.94■■■□□ 2.86
KPNA4-202ENST00000469804 HDGFL1Q5TGJ6 251 aa32.94■■■□□ 2.86
KPNA4-202ENST00000469804 ERBB4Q15303 1308 aa32.94■■■□□ 2.86
KPNA4-202ENST00000469804 HOXB7P09629 217 aa32.93■■■□□ 2.86
KPNA4-202ENST00000469804 TSPYL6Q8N831 410 aa32.93■■■□□ 2.86
KPNA4-202ENST00000469804 AFDNP55196 1824 aaKnown RBP32.93■■■□□ 2.86
KPNA4-202ENST00000469804 CAMTA2O94983 1202 aa32.92■■■□□ 2.86
KPNA4-202ENST00000469804 KLHL34Q8N239 644 aa32.92■■■□□ 2.86
KPNA4-202ENST00000469804 NUP98P52948 1817 aa32.91■■■□□ 2.86
KPNA4-202ENST00000469804 LRP10Q7Z4F1 713 aa32.9■■■□□ 2.86
KPNA4-202ENST00000469804 FHDC1Q9C0D6 1143 aaPredicted RBP32.9■■■□□ 2.86
KPNA4-202ENST00000469804 CHPF2Q9P2E5 772 aa32.9■■■□□ 2.86
KPNA4-202ENST00000469804 TTLL7Q6ZT98 887 aa32.89■■■□□ 2.86
KPNA4-202ENST00000469804 DDR1Q08345 913 aa32.88■■■□□ 2.85
KPNA4-202ENST00000469804 NFIXQ14938 502 aa32.86■■■□□ 2.85
KPNA4-202ENST00000469804 BICDL1Q6ZP65 573 aa32.86■■■□□ 2.85
KPNA4-202ENST00000469804 MYH16Q9H6N6 1097 aa32.86■■■□□ 2.85
KPNA4-202ENST00000469804 DDX21Q9NR30 783 aaKnown RBP eCLIP32.86■■■□□ 2.85
KPNA4-202ENST00000469804 TM4SF1P30408 202 aa32.85■■■□□ 2.85
KPNA4-202ENST00000469804 EXOSC9Q06265 439 aaKnown RBP32.85■■■□□ 2.85
KPNA4-202ENST00000469804 GOLGA2Q08379 1002 aa32.85■■■□□ 2.85
KPNA4-202ENST00000469804 TBC1D9BQ66K14 1250 aa32.85■■■□□ 2.85
KPNA4-202ENST00000469804 KIF13BQ9NQT8 1826 aa32.85■■■□□ 2.85
KPNA4-202ENST00000469804 NRXN2Q9P2S2 1712 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms