RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
CRAT-209ENST00000467343 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.2
CRAT-209ENST00000467343 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
CRAT-209ENST00000467343 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
CRAT-209ENST00000467343 COL15A1P39059 1388 aa16.33■□□□□ 0.2
CRAT-209ENST00000467343 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
CRAT-209ENST00000467343 UBR2Q8IWV8 1755 aa16.33■□□□□ 0.2
CRAT-209ENST00000467343 CHD4Q14839 1912 aa16.33■□□□□ 0.2
CRAT-209ENST00000467343 SIPA1L3O60292 1781 aaPredicted RBP16.32■□□□□ 0.2
CRAT-209ENST00000467343 SOS1Q07889 1333 aaPredicted RBP16.32■□□□□ 0.2
CRAT-209ENST00000467343 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
CRAT-209ENST00000467343 ZNF784Q8NCA9 323 aaPredicted RBP16.32■□□□□ 0.2
CRAT-209ENST00000467343 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
CRAT-209ENST00000467343 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
CRAT-209ENST00000467343 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
CRAT-209ENST00000467343 FKBP8Q14318 412 aa16.31■□□□□ 0.2
CRAT-209ENST00000467343 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
CRAT-209ENST00000467343 A0A087WZG4 1122 aa16.3■□□□□ 0.2
CRAT-209ENST00000467343 KCNQ3O43525 872 aa16.3■□□□□ 0.2
CRAT-209ENST00000467343 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
CRAT-209ENST00000467343 NPHP1O15259 732 aa16.29■□□□□ 0.2
CRAT-209ENST00000467343 NFE2L2Q16236 605 aa16.29■□□□□ 0.2
CRAT-209ENST00000467343 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
CRAT-209ENST00000467343 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
CRAT-209ENST00000467343 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
CRAT-209ENST00000467343 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
CRAT-209ENST00000467343 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
CRAT-209ENST00000467343 TGFB2P61812 414 aa16.27■□□□□ 0.2
CRAT-209ENST00000467343 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.2
CRAT-209ENST00000467343 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
CRAT-209ENST00000467343 N4BP2Q86UW6 1770 aaPredicted RBP16.27■□□□□ 0.2
CRAT-209ENST00000467343 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
CRAT-209ENST00000467343 A1BGP04217 495 aa16.26■□□□□ 0.19
CRAT-209ENST00000467343 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
CRAT-209ENST00000467343 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
CRAT-209ENST00000467343 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
CRAT-209ENST00000467343 PNISRQ8TF01 805 aaKnown RBP16.26■□□□□ 0.19
CRAT-209ENST00000467343 TBC1D2BQ9UPU7 963 aa16.26■□□□□ 0.19
CRAT-209ENST00000467343 C10orf71Q711Q0 1435 aa16.26■□□□□ 0.19
CRAT-209ENST00000467343 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
CRAT-209ENST00000467343 RIPK4P57078 832 aa16.25■□□□□ 0.19
CRAT-209ENST00000467343 DDR1Q08345 913 aa16.25■□□□□ 0.19
CRAT-209ENST00000467343 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
CRAT-209ENST00000467343 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
CRAT-209ENST00000467343 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
CRAT-209ENST00000467343 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
CRAT-209ENST00000467343 DPEP1P16444 411 aa16.24■□□□□ 0.19
CRAT-209ENST00000467343 IL6STP40189 918 aaPredicted RBP16.24■□□□□ 0.19
CRAT-209ENST00000467343 LMOD3Q0VAK6 560 aa16.24■□□□□ 0.19
CRAT-209ENST00000467343 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
CRAT-209ENST00000467343 EIF5P55010 431 aaKnown RBP16.23■□□□□ 0.19
CRAT-209ENST00000467343 NFIXQ14938 502 aa16.23■□□□□ 0.19
CRAT-209ENST00000467343 CCDC184Q52MB2 194 aa16.23■□□□□ 0.19
CRAT-209ENST00000467343 DZIP3Q86Y13 1208 aaKnown RBP16.23■□□□□ 0.19
CRAT-209ENST00000467343 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
CRAT-209ENST00000467343 KIF13BQ9NQT8 1826 aa16.23■□□□□ 0.19
CRAT-209ENST00000467343 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
CRAT-209ENST00000467343 SERPINB2P05120 415 aa16.22■□□□□ 0.19
CRAT-209ENST00000467343 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
CRAT-209ENST00000467343 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
CRAT-209ENST00000467343 TM4SF1P30408 202 aa16.21■□□□□ 0.19
CRAT-209ENST00000467343 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
CRAT-209ENST00000467343 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
CRAT-209ENST00000467343 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
CRAT-209ENST00000467343 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
CRAT-209ENST00000467343 CHRNA5P30532 468 aa16.2■□□□□ 0.18
CRAT-209ENST00000467343 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
CRAT-209ENST00000467343 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
CRAT-209ENST00000467343 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
CRAT-209ENST00000467343 SCN7AQ01118 1682 aa16.2■□□□□ 0.18
CRAT-209ENST00000467343 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
CRAT-209ENST00000467343 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
CRAT-209ENST00000467343 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
CRAT-209ENST00000467343 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
CRAT-209ENST00000467343 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
CRAT-209ENST00000467343 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
CRAT-209ENST00000467343 C1QTNF8P60827 252 aa16.18■□□□□ 0.18
CRAT-209ENST00000467343 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
CRAT-209ENST00000467343 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
CRAT-209ENST00000467343 GOLGB1Q14789 3259 aaKnown RBP16.18■□□□□ 0.18
CRAT-209ENST00000467343 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
CRAT-209ENST00000467343 CARMIL3Q8ND23 1372 aa16.17■□□□□ 0.18
CRAT-209ENST00000467343 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
CRAT-209ENST00000467343 MYL6BP14649 208 aa16.17■□□□□ 0.18
CRAT-209ENST00000467343 ST5P78524 1137 aa16.17■□□□□ 0.18
CRAT-209ENST00000467343 C2CD5Q86YS7 1000 aa16.17■□□□□ 0.18
CRAT-209ENST00000467343 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 H0YIN7 160 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 CAMTA2O94983 1202 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
CRAT-209ENST00000467343 KIF6Q6ZMV9 814 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
CRAT-209ENST00000467343 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
CRAT-209ENST00000467343 ZNF622Q969S3 477 aaKnown RBP eCLIP16.15■□□□□ 0.18
CRAT-209ENST00000467343 YTHDC1Q96MU7 727 aaKnown RBP16.15■□□□□ 0.18
CRAT-209ENST00000467343 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
CRAT-209ENST00000467343 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
CRAT-209ENST00000467343 CEP350Q5VT06 3117 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms