RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
PMF1-204ENST00000466489 GNPATO15228 680 aa12.82□□□□□ -0.36
PMF1-204ENST00000466489 ITPK1Q13572 414 aa12.82□□□□□ -0.36
PMF1-204ENST00000466489 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
PMF1-204ENST00000466489 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
PMF1-204ENST00000466489 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
PMF1-204ENST00000466489 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
PMF1-204ENST00000466489 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
PMF1-204ENST00000466489 CHL1O00533 1208 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 MSH5O43196 834 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 DNAJC10Q8IXB1 793 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
PMF1-204ENST00000466489 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
PMF1-204ENST00000466489 MYH14Q7Z406 1995 aaKnown RBP12.8□□□□□ -0.36
PMF1-204ENST00000466489 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
PMF1-204ENST00000466489 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
PMF1-204ENST00000466489 ADRA2BP18089 450 aa12.8□□□□□ -0.36
PMF1-204ENST00000466489 SSFA2P28290 1259 aa12.8□□□□□ -0.36
PMF1-204ENST00000466489 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
PMF1-204ENST00000466489 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
PMF1-204ENST00000466489 AAMPQ13685 434 aa12.8□□□□□ -0.36
PMF1-204ENST00000466489 ZNF827Q17R98 1081 aa12.8□□□□□ -0.36
PMF1-204ENST00000466489 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
PMF1-204ENST00000466489 KCNQ3O43525 872 aa12.79□□□□□ -0.36
PMF1-204ENST00000466489 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
PMF1-204ENST00000466489 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
PMF1-204ENST00000466489 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
PMF1-204ENST00000466489 A0A087WZG4 1122 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
PMF1-204ENST00000466489 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 PHF14O94880 888 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 HOXB7P09629 217 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
PMF1-204ENST00000466489 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
PMF1-204ENST00000466489 CASZ1Q86V15 1759 aa12.77□□□□□ -0.36
PMF1-204ENST00000466489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
PMF1-204ENST00000466489 ZNF853P0CG23 659 aa12.77□□□□□ -0.37
PMF1-204ENST00000466489 RFC4P35249 363 aa12.77□□□□□ -0.37
PMF1-204ENST00000466489 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
PMF1-204ENST00000466489 E9PSI1 815 aa12.76□□□□□ -0.37
PMF1-204ENST00000466489 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
PMF1-204ENST00000466489 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
PMF1-204ENST00000466489 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
PMF1-204ENST00000466489 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
PMF1-204ENST00000466489 ZPR1O75312 459 aa12.75□□□□□ -0.37
PMF1-204ENST00000466489 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
PMF1-204ENST00000466489 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
PMF1-204ENST00000466489 COL15A1P39059 1388 aa12.75□□□□□ -0.37
PMF1-204ENST00000466489 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
PMF1-204ENST00000466489 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
PMF1-204ENST00000466489 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
PMF1-204ENST00000466489 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
PMF1-204ENST00000466489 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
PMF1-204ENST00000466489 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
PMF1-204ENST00000466489 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
PMF1-204ENST00000466489 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
PMF1-204ENST00000466489 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
PMF1-204ENST00000466489 ARXQ96QS3 562 aa12.74□□□□□ -0.37
PMF1-204ENST00000466489 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
PMF1-204ENST00000466489 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
PMF1-204ENST00000466489 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
PMF1-204ENST00000466489 USP16Q9Y5T5 823 aa12.74□□□□□ -0.37
PMF1-204ENST00000466489 ZNF521Q96K83 1311 aa12.73□□□□□ -0.37
PMF1-204ENST00000466489 POLD1P28340 1107 aa12.73□□□□□ -0.37
PMF1-204ENST00000466489 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
PMF1-204ENST00000466489 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
PMF1-204ENST00000466489 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
PMF1-204ENST00000466489 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
PMF1-204ENST00000466489 A1BGP04217 495 aa12.72□□□□□ -0.37
PMF1-204ENST00000466489 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
PMF1-204ENST00000466489 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
PMF1-204ENST00000466489 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
PMF1-204ENST00000466489 STK31Q9BXU1 1019 aa12.72□□□□□ -0.37
PMF1-204ENST00000466489 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
PMF1-204ENST00000466489 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
PMF1-204ENST00000466489 EIF5P55010 431 aaKnown RBP12.71□□□□□ -0.37
PMF1-204ENST00000466489 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.37
PMF1-204ENST00000466489 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
PMF1-204ENST00000466489 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
PMF1-204ENST00000466489 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.37
PMF1-204ENST00000466489 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 LRP5O75197 1615 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
PMF1-204ENST00000466489 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
PMF1-204ENST00000466489 MYL6BP14649 208 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
PMF1-204ENST00000466489 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 PPP1R1BQ9UD71 204 aaPredicted RBP12.7□□□□□ -0.38
PMF1-204ENST00000466489 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 BCORQ6W2J9 1755 aa12.7□□□□□ -0.38
PMF1-204ENST00000466489 SRCAPQ6ZRS2 3230 aa12.69□□□□□ -0.38
PMF1-204ENST00000466489 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
PMF1-204ENST00000466489 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms