RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
EDEM3-204ENST00000466392 ANP32CO43423 234 aa15.59■□□□□ 0.09
EDEM3-204ENST00000466392 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
EDEM3-204ENST00000466392 VSIG10Q8N0Z9 540 aa15.59■□□□□ 0.09
EDEM3-204ENST00000466392 FMNL2Q96PY5 1086 aa15.59■□□□□ 0.09
EDEM3-204ENST00000466392 RFC4P35249 363 aa15.58■□□□□ 0.08
EDEM3-204ENST00000466392 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
EDEM3-204ENST00000466392 TAF7Q15545 349 aaPredicted RBP15.58■□□□□ 0.08
EDEM3-204ENST00000466392 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
EDEM3-204ENST00000466392 SOS1Q07889 1333 aaPredicted RBP15.58■□□□□ 0.08
EDEM3-204ENST00000466392 GYS1P13807 737 aa15.57■□□□□ 0.08
EDEM3-204ENST00000466392 NLGN2Q8NFZ4 835 aa15.57■□□□□ 0.08
EDEM3-204ENST00000466392 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
EDEM3-204ENST00000466392 COL15A1P39059 1388 aa15.57■□□□□ 0.08
EDEM3-204ENST00000466392 A1BGP04217 495 aa15.56■□□□□ 0.08
EDEM3-204ENST00000466392 ADRA2BP18089 450 aa15.56■□□□□ 0.08
EDEM3-204ENST00000466392 ZNF330Q9Y3S2 320 aaPredicted RBP15.56■□□□□ 0.08
EDEM3-204ENST00000466392 USP42Q9H9J4 1324 aaKnown RBP15.56■□□□□ 0.08
EDEM3-204ENST00000466392 MMP10P09238 476 aa15.55■□□□□ 0.08
EDEM3-204ENST00000466392 SCN7AQ01118 1682 aa15.54■□□□□ 0.08
EDEM3-204ENST00000466392 STARD3NLO95772 234 aa15.54■□□□□ 0.08
EDEM3-204ENST00000466392 FKBP8Q14318 412 aa15.54■□□□□ 0.08
EDEM3-204ENST00000466392 USPL1Q5W0Q7 1092 aa15.54■□□□□ 0.08
EDEM3-204ENST00000466392 MRS2Q9HD23 443 aa15.54■□□□□ 0.08
EDEM3-204ENST00000466392 TRIM35Q9UPQ4 493 aa15.54■□□□□ 0.08
EDEM3-204ENST00000466392 AFDNP55196 1824 aaKnown RBP15.53■□□□□ 0.08
EDEM3-204ENST00000466392 KIF13BQ9NQT8 1826 aa15.53■□□□□ 0.08
EDEM3-204ENST00000466392 APAF1O14727 1248 aa15.53■□□□□ 0.08
EDEM3-204ENST00000466392 SNRPA1P09661 255 aaKnown RBP15.53■□□□□ 0.08
EDEM3-204ENST00000466392 BCORQ6W2J9 1755 aa15.53■□□□□ 0.08
EDEM3-204ENST00000466392 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
EDEM3-204ENST00000466392 KIAA1551Q9HCM1 1747 aa15.53■□□□□ 0.08
EDEM3-204ENST00000466392 EIF5P55010 431 aaKnown RBP15.52■□□□□ 0.08
EDEM3-204ENST00000466392 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
EDEM3-204ENST00000466392 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
EDEM3-204ENST00000466392 WWC3Q9ULE0 1092 aa15.52■□□□□ 0.08
EDEM3-204ENST00000466392 ZPR1O75312 459 aa15.51■□□□□ 0.07
EDEM3-204ENST00000466392 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
EDEM3-204ENST00000466392 LMOD3Q0VAK6 560 aa15.51■□□□□ 0.07
EDEM3-204ENST00000466392 NLGN1Q8N2Q7 840 aa15.51■□□□□ 0.07
EDEM3-204ENST00000466392 PNISRQ8TF01 805 aaKnown RBP15.51■□□□□ 0.07
EDEM3-204ENST00000466392 BCL2L12Q9HB09 334 aa15.51■□□□□ 0.07
EDEM3-204ENST00000466392 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
EDEM3-204ENST00000466392 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
EDEM3-204ENST00000466392 DDR1Q08345 913 aa15.5■□□□□ 0.07
EDEM3-204ENST00000466392 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
EDEM3-204ENST00000466392 NARFQ9UHQ1 456 aa15.5■□□□□ 0.07
EDEM3-204ENST00000466392 NBPF26B4DH59 902 aa15.49■□□□□ 0.07
EDEM3-204ENST00000466392 NBPF10Q6P3W6 841 aaKnown RBP15.49■□□□□ 0.07
EDEM3-204ENST00000466392 NBPF15Q8N660 670 aa15.49■□□□□ 0.07
EDEM3-204ENST00000466392 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
EDEM3-204ENST00000466392 IL6STP40189 918 aaPredicted RBP15.48■□□□□ 0.07
EDEM3-204ENST00000466392 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
EDEM3-204ENST00000466392 PARP3Q9Y6F1 533 aa15.48■□□□□ 0.07
EDEM3-204ENST00000466392 NFIXQ14938 502 aa15.47■□□□□ 0.07
EDEM3-204ENST00000466392 BICDL1Q6ZP65 573 aa15.47■□□□□ 0.07
EDEM3-204ENST00000466392 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
EDEM3-204ENST00000466392 NRXN2Q9P2S2 1712 aa15.47■□□□□ 0.07
EDEM3-204ENST00000466392 CD2APQ9Y5K6 639 aa15.47■□□□□ 0.07
EDEM3-204ENST00000466392 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
EDEM3-204ENST00000466392 TM4SF1P30408 202 aa15.46■□□□□ 0.07
EDEM3-204ENST00000466392 NGEFQ8N5V2 710 aa15.46■□□□□ 0.07
EDEM3-204ENST00000466392 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.06
EDEM3-204ENST00000466392 A0A087WZG4 1122 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 CHL1O00533 1208 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 YBX3P16989 372 aaKnown RBP eCLIP15.45■□□□□ 0.06
EDEM3-204ENST00000466392 GPR162Q16538 588 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
EDEM3-204ENST00000466392 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 NECTIN2Q92692 538 aa15.45■□□□□ 0.06
EDEM3-204ENST00000466392 BRCA1P38398 1863 aaKnown RBP15.45■□□□□ 0.06
EDEM3-204ENST00000466392 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
EDEM3-204ENST00000466392 MYL6BP14649 208 aa15.44■□□□□ 0.06
EDEM3-204ENST00000466392 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
EDEM3-204ENST00000466392 ANKRD31Q8N7Z5 1873 aa15.44■□□□□ 0.06
EDEM3-204ENST00000466392 NUP98P52948 1817 aa15.43■□□□□ 0.06
EDEM3-204ENST00000466392 A0A0G2JLW4 131 aa15.43■□□□□ 0.06
EDEM3-204ENST00000466392 ANXA1P04083 346 aa15.43■□□□□ 0.06
EDEM3-204ENST00000466392 NPM2Q86SE8 214 aaKnown RBP15.43■□□□□ 0.06
EDEM3-204ENST00000466392 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
EDEM3-204ENST00000466392 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
EDEM3-204ENST00000466392 CARMIL3Q8ND23 1372 aa15.43■□□□□ 0.06
EDEM3-204ENST00000466392 CHD4Q14839 1912 aa15.43■□□□□ 0.06
EDEM3-204ENST00000466392 UTRNP46939 3433 aa15.42■□□□□ 0.06
EDEM3-204ENST00000466392 GOLGB1Q14789 3259 aaKnown RBP15.42■□□□□ 0.06
EDEM3-204ENST00000466392 CCDC24Q8N4L8 307 aa15.42■□□□□ 0.06
EDEM3-204ENST00000466392 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
EDEM3-204ENST00000466392 SERPINB2P05120 415 aa15.41■□□□□ 0.06
EDEM3-204ENST00000466392 DPEP1P16444 411 aa15.41■□□□□ 0.06
EDEM3-204ENST00000466392 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
EDEM3-204ENST00000466392 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
EDEM3-204ENST00000466392 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
EDEM3-204ENST00000466392 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
EDEM3-204ENST00000466392 ZNF853P0CG23 659 aa15.4■□□□□ 0.06
EDEM3-204ENST00000466392 CHRNA5P30532 468 aa15.4■□□□□ 0.06
EDEM3-204ENST00000466392 HLFQ16534 295 aa15.4■□□□□ 0.06
EDEM3-204ENST00000466392 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
EDEM3-204ENST00000466392 CACNA1SQ13698 1873 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms