RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
RTFDC1-205ENST00000466260 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
RTFDC1-205ENST00000466260 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
RTFDC1-205ENST00000466260 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-205ENST00000466260 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-205ENST00000466260 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
RTFDC1-205ENST00000466260 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
RTFDC1-205ENST00000466260 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
RTFDC1-205ENST00000466260 SSFA2P28290 1259 aa12.86□□□□□ -0.35
RTFDC1-205ENST00000466260 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
RTFDC1-205ENST00000466260 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
RTFDC1-205ENST00000466260 ARXQ96QS3 562 aa12.86□□□□□ -0.35
RTFDC1-205ENST00000466260 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-205ENST00000466260 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
RTFDC1-205ENST00000466260 FHDC1Q9C0D6 1143 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-205ENST00000466260 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
RTFDC1-205ENST00000466260 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
RTFDC1-205ENST00000466260 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
RTFDC1-205ENST00000466260 RIPK4P57078 832 aa12.84□□□□□ -0.35
RTFDC1-205ENST00000466260 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
RTFDC1-205ENST00000466260 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
RTFDC1-205ENST00000466260 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-205ENST00000466260 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 RFC4P35249 363 aa12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
RTFDC1-205ENST00000466260 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 CYP19A1P11511 503 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 MRS2Q9HD23 443 aa12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-205ENST00000466260 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
RTFDC1-205ENST00000466260 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
RTFDC1-205ENST00000466260 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
RTFDC1-205ENST00000466260 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
RTFDC1-205ENST00000466260 COL15A1P39059 1388 aa12.81□□□□□ -0.36
RTFDC1-205ENST00000466260 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
RTFDC1-205ENST00000466260 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-205ENST00000466260 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-205ENST00000466260 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
RTFDC1-205ENST00000466260 LAS1LQ9Y4W2 734 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-205ENST00000466260 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-205ENST00000466260 BCORQ6W2J9 1755 aa12.79□□□□□ -0.36
RTFDC1-205ENST00000466260 STARD3NLO95772 234 aa12.79□□□□□ -0.36
RTFDC1-205ENST00000466260 A1BGP04217 495 aa12.79□□□□□ -0.36
RTFDC1-205ENST00000466260 LMOD3Q0VAK6 560 aa12.79□□□□□ -0.36
RTFDC1-205ENST00000466260 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
RTFDC1-205ENST00000466260 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-205ENST00000466260 MMP10P09238 476 aa12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 GYS1P13807 737 aa12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 USP42Q9H9J4 1324 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-205ENST00000466260 APAF1O14727 1248 aa12.77□□□□□ -0.37
RTFDC1-205ENST00000466260 ZPR1O75312 459 aa12.77□□□□□ -0.37
RTFDC1-205ENST00000466260 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-205ENST00000466260 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
RTFDC1-205ENST00000466260 CENPBP07199 599 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-205ENST00000466260 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-205ENST00000466260 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-205ENST00000466260 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-205ENST00000466260 NLGN1Q8N2Q7 840 aa12.75□□□□□ -0.37
RTFDC1-205ENST00000466260 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
RTFDC1-205ENST00000466260 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
RTFDC1-205ENST00000466260 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
RTFDC1-205ENST00000466260 CACNA1SQ13698 1873 aa12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 BICDL1Q6ZP65 573 aa12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 CHD4Q14839 1912 aa12.74□□□□□ -0.37
RTFDC1-205ENST00000466260 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-205ENST00000466260 EIF5P55010 431 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-205ENST00000466260 GPR162Q16538 588 aa12.73□□□□□ -0.37
RTFDC1-205ENST00000466260 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
RTFDC1-205ENST00000466260 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
RTFDC1-205ENST00000466260 NUP98P52948 1817 aa12.73□□□□□ -0.37
RTFDC1-205ENST00000466260 A0A087WZG4 1122 aa12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 MYL6BP14649 208 aa12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 DDR1Q08345 913 aa12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 DZIP3Q86Y13 1208 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-205ENST00000466260 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.37
RTFDC1-205ENST00000466260 GIGYF1O75420 1035 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-205ENST00000466260 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms