RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MSL1Q68DK7 614 aa34.1■■■■□ 3.05
SMC4-206ENST00000465903 TEX13AQ9BXU3 409 aaPredicted RBP34.09■■■■□ 3.05
SMC4-206ENST00000465903 APAF1O14727 1248 aa34.08■■■■□ 3.05
SMC4-206ENST00000465903 ARXQ96QS3 562 aa34.08■■■■□ 3.05
SMC4-206ENST00000465903 ZBTB1Q9Y2K1 713 aa34.08■■■■□ 3.05
SMC4-206ENST00000465903 PRAMEF22A3QJZ6 481 aa34.07■■■■□ 3.04
SMC4-206ENST00000465903 POLD1P28340 1107 aa34.07■■■■□ 3.04
SMC4-206ENST00000465903 STARD3NLO95772 234 aa34.06■■■■□ 3.04
SMC4-206ENST00000465903 SOS1Q07889 1333 aaPredicted RBP34.05■■■■□ 3.04
SMC4-206ENST00000465903 USP16Q9Y5T5 823 aa34.05■■■■□ 3.04
SMC4-206ENST00000465903 SNRPA1P09661 255 aaKnown RBP34.03■■■■□ 3.04
SMC4-206ENST00000465903 RFC4P35249 363 aa34.03■■■■□ 3.04
SMC4-206ENST00000465903 EIF4A1P60842 406 aaKnown RBP34.02■■■■□ 3.04
SMC4-206ENST00000465903 FHDC1Q9C0D6 1143 aaPredicted RBP34.01■■■■□ 3.03
SMC4-206ENST00000465903 CANXP27824 592 aaKnown RBP34■■■■□ 3.03
SMC4-206ENST00000465903 A1BGP04217 495 aa33.99■■■■□ 3.03
SMC4-206ENST00000465903 GYS1P13807 737 aa33.99■■■■□ 3.03
SMC4-206ENST00000465903 EIF5P55010 431 aaKnown RBP33.99■■■■□ 3.03
SMC4-206ENST00000465903 BABAM1Q9NWV8 329 aa33.99■■■■□ 3.03
SMC4-206ENST00000465903 SRP68Q9UHB9 627 aaKnown RBP33.99■■■■□ 3.03
SMC4-206ENST00000465903 TSPYL4Q9UJ04 414 aa33.98■■■■□ 3.03
SMC4-206ENST00000465903 LAMB4A4D0S4 1761 aa33.98■■■■□ 3.03
SMC4-206ENST00000465903 SYT17Q9BSW7 474 aa33.97■■■■□ 3.03
SMC4-206ENST00000465903 USP42Q9H9J4 1324 aaKnown RBP33.97■■■■□ 3.03
SMC4-206ENST00000465903 COL15A1P39059 1388 aa33.97■■■■□ 3.03
SMC4-206ENST00000465903 GIGYF1O75420 1035 aaPredicted RBP33.96■■■■□ 3.03
SMC4-206ENST00000465903 NLGN1Q8N2Q7 840 aa33.95■■■■□ 3.03
SMC4-206ENST00000465903 CHL1O00533 1208 aa33.94■■■■□ 3.02
SMC4-206ENST00000465903 IL6STP40189 918 aaPredicted RBP33.93■■■■□ 3.02
SMC4-206ENST00000465903 NARFQ9UHQ1 456 aa33.93■■■■□ 3.02
SMC4-206ENST00000465903 SENP3-EIF4A1A0A087X0R7 540 aa33.91■■■■□ 3.02
SMC4-206ENST00000465903 PIP4K2AP48426 406 aaPredicted RBP33.91■■■■□ 3.02
SMC4-206ENST00000465903 USPL1Q5W0Q7 1092 aa33.91■■■■□ 3.02
SMC4-206ENST00000465903 FKBP8Q14318 412 aa33.9■■■■□ 3.02
SMC4-206ENST00000465903 NBPF26B4DH59 902 aa33.89■■■■□ 3.02
SMC4-206ENST00000465903 ZPR1O75312 459 aa33.89■■■■□ 3.02
SMC4-206ENST00000465903 MMP10P09238 476 aa33.89■■■■□ 3.02
SMC4-206ENST00000465903 NBPF10Q6P3W6 841 aaKnown RBP33.89■■■■□ 3.02
SMC4-206ENST00000465903 FAM9BQ8IZU0 186 aa33.89■■■■□ 3.02
SMC4-206ENST00000465903 NBPF15Q8N660 670 aa33.89■■■■□ 3.02
SMC4-206ENST00000465903 LAS1LQ9Y4W2 734 aaKnown RBP33.89■■■■□ 3.02
SMC4-206ENST00000465903 BCL2L12Q9HB09 334 aa33.88■■■■□ 3.01
SMC4-206ENST00000465903 A0A087WZG4 1122 aa33.87■■■■□ 3.01
SMC4-206ENST00000465903 ZNF853P0CG23 659 aa33.87■■■■□ 3.01
SMC4-206ENST00000465903 KLHL34Q8N239 644 aa33.87■■■■□ 3.01
SMC4-206ENST00000465903 CFAP44Q96MT7 982 aa33.87■■■■□ 3.01
SMC4-206ENST00000465903 TBC1D2BQ9UPU7 963 aa33.85■■■■□ 3.01
SMC4-206ENST00000465903 ZNF330Q9Y3S2 320 aaPredicted RBP33.85■■■■□ 3.01
SMC4-206ENST00000465903 TM4SF1P30408 202 aa33.84■■■■□ 3.01
SMC4-206ENST00000465903 CCDC27Q2M243 656 aa33.84■■■■□ 3.01
SMC4-206ENST00000465903 NCBP3Q53F19 620 aaKnown RBP33.83■■■■□ 3.01
SMC4-206ENST00000465903 KRT24Q2M2I5 525 aa33.82■■■■□ 3
SMC4-206ENST00000465903 NLGN2Q8NFZ4 835 aa33.82■■■■□ 3
SMC4-206ENST00000465903 SCN7AQ01118 1682 aa33.82■■■■□ 3
SMC4-206ENST00000465903 KIF13BQ9NQT8 1826 aa33.81■■■■□ 3
SMC4-206ENST00000465903 BCORQ6W2J9 1755 aa33.81■■■■□ 3
SMC4-206ENST00000465903 DDR1Q08345 913 aa33.81■■■■□ 3
SMC4-206ENST00000465903 MBIPQ9NS73 344 aa33.81■■■■□ 3
SMC4-206ENST00000465903 CD2APQ9Y5K6 639 aa33.81■■■■□ 3
SMC4-206ENST00000465903 WWC1Q8IX03 1113 aa33.8■■■■□ 3
SMC4-206ENST00000465903 IFT57Q9NWB7 429 aa33.8■■■■□ 3
SMC4-206ENST00000465903 AFDNP55196 1824 aaKnown RBP33.79■■■■□ 3
SMC4-206ENST00000465903 CALD1Q05682 793 aaKnown RBP33.79■■■■□ 3
SMC4-206ENST00000465903 PARP3Q9Y6F1 533 aa33.79■■■■□ 3
SMC4-206ENST00000465903 CAMTA2O94983 1202 aa33.78■■■■□ 3
SMC4-206ENST00000465903 GNAI1P63096 354 aa33.78■■■■□ 3
SMC4-206ENST00000465903 DZIP3Q86Y13 1208 aaKnown RBP33.78■■■■□ 3
SMC4-206ENST00000465903 CCER2I3L3R5 266 aa33.77■■■■□ 3
SMC4-206ENST00000465903 NFIXQ14938 502 aa33.77■■■■□ 3
SMC4-206ENST00000465903 NPM2Q86SE8 214 aaKnown RBP33.77■■■■□ 3
SMC4-206ENST00000465903 POLRMTO00411 1230 aaKnown RBP33.76■■■□□ 2.99
SMC4-206ENST00000465903 DIEXFQ68CQ4 756 aaKnown RBP33.76■■■□□ 2.99
SMC4-206ENST00000465903 EIF2S2P20042 333 aaKnown RBP33.75■■■□□ 2.99
SMC4-206ENST00000465903 ERBB4Q15303 1308 aa33.74■■■□□ 2.99
SMC4-206ENST00000465903 NRXN2Q9P2S2 1712 aa33.73■■■□□ 2.99
SMC4-206ENST00000465903 PDIA6Q15084 440 aa33.73■■■□□ 2.99
SMC4-206ENST00000465903 SALL2Q9Y467 1007 aaPredicted RBP33.73■■■□□ 2.99
SMC4-206ENST00000465903 KIAA1551Q9HCM1 1747 aa33.73■■■□□ 2.99
SMC4-206ENST00000465903 TBC1D9BQ66K14 1250 aa33.72■■■□□ 2.99
SMC4-206ENST00000465903 C10orf71Q711Q0 1435 aa33.71■■■□□ 2.99
SMC4-206ENST00000465903 LRP10Q7Z4F1 713 aa33.71■■■□□ 2.99
SMC4-206ENST00000465903 NUP98P52948 1817 aa33.7■■■□□ 2.99
SMC4-206ENST00000465903 MYL6BP14649 208 aa33.7■■■□□ 2.99
SMC4-206ENST00000465903 NGEFQ8N5V2 710 aa33.7■■■□□ 2.99
SMC4-206ENST00000465903 BICDL1Q6ZP65 573 aa33.69■■■□□ 2.98
SMC4-206ENST00000465903 NECTIN2Q92692 538 aa33.69■■■□□ 2.98
SMC4-206ENST00000465903 N4BP2Q86UW6 1770 aaPredicted RBP33.69■■■□□ 2.98
SMC4-206ENST00000465903 HOXB7P09629 217 aa33.68■■■□□ 2.98
SMC4-206ENST00000465903 PROSER3Q2NL68 480 aa33.68■■■□□ 2.98
SMC4-206ENST00000465903 DUSP27Q5VZP5 1158 aa33.68■■■□□ 2.98
SMC4-206ENST00000465903 ANXA1P04083 346 aa33.67■■■□□ 2.98
SMC4-206ENST00000465903 SERPINB2P05120 415 aa33.67■■■□□ 2.98
SMC4-206ENST00000465903 TTLL7Q6ZT98 887 aa33.67■■■□□ 2.98
SMC4-206ENST00000465903 IL16Q14005 1332 aa33.67■■■□□ 2.98
SMC4-206ENST00000465903 CLEC4GQ6UXB4 293 aa33.66■■■□□ 2.98
SMC4-206ENST00000465903 WDR63Q8IWG1 891 aa33.65■■■□□ 2.98
SMC4-206ENST00000465903 MIER1Q8N108 512 aa33.65■■■□□ 2.98
SMC4-206ENST00000465903 C8orf58Q8NAV2 365 aa33.65■■■□□ 2.98
SMC4-206ENST00000465903 RGL2O15211 777 aa33.64■■■□□ 2.98
SMC4-206ENST00000465903 HLFQ16534 295 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms