RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 RRP7AQ9Y3A4 280 aaKnown RBP10.2□□□□□ -0.78
THBS3-205ENST00000465596 LAMB2P55268 1798 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 RIPK4P57078 832 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 TAF7Q15545 349 aaPredicted RBP10.19□□□□□ -0.78
THBS3-205ENST00000465596 RTF1Q92541 710 aaKnown RBP10.19□□□□□ -0.78
THBS3-205ENST00000465596 AK7Q96M32 723 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 MIS18AQ9NYP9 233 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 ZBTB1Q9Y2K1 713 aa10.19□□□□□ -0.78
THBS3-205ENST00000465596 COL15A1P39059 1388 aa10.18□□□□□ -0.78
THBS3-205ENST00000465596 APAF1O14727 1248 aa10.18□□□□□ -0.78
THBS3-205ENST00000465596 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
THBS3-205ENST00000465596 ADRA2BP18089 450 aa10.18□□□□□ -0.78
THBS3-205ENST00000465596 EIF4A1P60842 406 aaKnown RBP10.18□□□□□ -0.78
THBS3-205ENST00000465596 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
THBS3-205ENST00000465596 FMNL2Q96PY5 1086 aa10.18□□□□□ -0.78
THBS3-205ENST00000465596 ATF5Q9Y2D1 282 aaPredicted RBP10.18□□□□□ -0.78
THBS3-205ENST00000465596 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
THBS3-205ENST00000465596 CHL1O00533 1208 aa10.17□□□□□ -0.78
THBS3-205ENST00000465596 HMGB2P26583 209 aaKnown RBP10.17□□□□□ -0.78
THBS3-205ENST00000465596 EIF5P55010 431 aaKnown RBP10.17□□□□□ -0.78
THBS3-205ENST00000465596 FLAD1Q8NFF5 587 aa10.17□□□□□ -0.78
THBS3-205ENST00000465596 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
THBS3-205ENST00000465596 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
THBS3-205ENST00000465596 USP16Q9Y5T5 823 aa10.17□□□□□ -0.78
THBS3-205ENST00000465596 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 TNRC6CQ9HCJ0 1690 aaKnown RBP10.16□□□□□ -0.78
THBS3-205ENST00000465596 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
THBS3-205ENST00000465596 PHF14O94880 888 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 GYS1P13807 737 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
THBS3-205ENST00000465596 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
THBS3-205ENST00000465596 LRP10Q7Z4F1 713 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 TTC5Q8N0Z6 440 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
THBS3-205ENST00000465596 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
THBS3-205ENST00000465596 DDX60Q8IY21 1712 aaKnown RBP10.16□□□□□ -0.78
THBS3-205ENST00000465596 A1BGP04217 495 aa10.15□□□□□ -0.78
THBS3-205ENST00000465596 NEFMP07197 916 aa10.15□□□□□ -0.78
THBS3-205ENST00000465596 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.78
THBS3-205ENST00000465596 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
THBS3-205ENST00000465596 SRP68Q9UHB9 627 aaKnown RBP10.15□□□□□ -0.78
THBS3-205ENST00000465596 SBF1O95248 1867 aa10.15□□□□□ -0.79
THBS3-205ENST00000465596 ZNF521Q96K83 1311 aa10.14□□□□□ -0.79
THBS3-205ENST00000465596 SNRPA1P09661 255 aaKnown RBP10.14□□□□□ -0.79
THBS3-205ENST00000465596 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
THBS3-205ENST00000465596 KRT24Q2M2I5 525 aa10.14□□□□□ -0.79
THBS3-205ENST00000465596 CCDC88AQ3V6T2 1871 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 PXDNLA1KZ92 1463 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 IL6STP40189 918 aaPredicted RBP10.13□□□□□ -0.79
THBS3-205ENST00000465596 FKBP8Q14318 412 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 PDIA6Q15084 440 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 WWC1Q8IX03 1113 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 ARXQ96QS3 562 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 TEX13AQ9BXU3 409 aaPredicted RBP10.13□□□□□ -0.79
THBS3-205ENST00000465596 FHDC1Q9C0D6 1143 aaPredicted RBP10.13□□□□□ -0.79
THBS3-205ENST00000465596 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
THBS3-205ENST00000465596 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 STARD3NLO95772 234 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 TM4SF1P30408 202 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
THBS3-205ENST00000465596 DDR1Q08345 913 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 MBIPQ9NS73 344 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 NARFQ9UHQ1 456 aa10.12□□□□□ -0.79
THBS3-205ENST00000465596 MYH3P11055 1940 aa10.11□□□□□ -0.79
THBS3-205ENST00000465596 FER1L6Q2WGJ9 1857 aa10.11□□□□□ -0.79
THBS3-205ENST00000465596 SENP3-EIF4A1A0A087X0R7 540 aa10.11□□□□□ -0.79
THBS3-205ENST00000465596 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
THBS3-205ENST00000465596 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
THBS3-205ENST00000465596 SYT17Q9BSW7 474 aa10.11□□□□□ -0.79
THBS3-205ENST00000465596 CARMIL3Q8ND23 1372 aa10.11□□□□□ -0.79
THBS3-205ENST00000465596 TAF1P21675 1872 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 IL16Q14005 1332 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
THBS3-205ENST00000465596 MMP10P09238 476 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 RFC4P35249 363 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 PROSER3Q2NL68 480 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 NLGN2Q8NFZ4 835 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
THBS3-205ENST00000465596 SLX4Q8IY92 1834 aa10.1□□□□□ -0.79
THBS3-205ENST00000465596 DICER1Q9UPY3 1922 aaKnown RBP10.09□□□□□ -0.79
THBS3-205ENST00000465596 RGL2O15211 777 aa10.09□□□□□ -0.79
THBS3-205ENST00000465596 MSH5O43196 834 aa10.09□□□□□ -0.79
THBS3-205ENST00000465596 HOXB7P09629 217 aa10.09□□□□□ -0.79
THBS3-205ENST00000465596 MIER1Q8N108 512 aa10.09□□□□□ -0.79
THBS3-205ENST00000465596 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
THBS3-205ENST00000465596 POLD1P28340 1107 aa10.08□□□□□ -0.8
THBS3-205ENST00000465596 NFIXQ14938 502 aa10.08□□□□□ -0.8
THBS3-205ENST00000465596 DIEXFQ68CQ4 756 aaKnown RBP10.08□□□□□ -0.8
THBS3-205ENST00000465596 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
THBS3-205ENST00000465596 GNAI1P63096 354 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms