RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 TUBGCP6Q96RT7 1819 aa24.02■■□□□ 1.44
SCAMP3-204ENST00000465312 IL16Q14005 1332 aa24.01■■□□□ 1.43
SCAMP3-204ENST00000465312 RC3H1Q5TC82 1133 aaKnown RBP24■■□□□ 1.43
SCAMP3-204ENST00000465312 SMIM5Q71RC9 77 aa24■■□□□ 1.43
SCAMP3-204ENST00000465312 USP16Q9Y5T5 823 aa24■■□□□ 1.43
SCAMP3-204ENST00000465312 LAMB4A4D0S4 1761 aa23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 GIGYF1O75420 1035 aaPredicted RBP23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 ZNF853P0CG23 659 aa23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 EIF2S2P20042 333 aaKnown RBP23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 KRT24Q2M2I5 525 aa23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 ARXQ96QS3 562 aa23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 ZBTB1Q9Y2K1 713 aa23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 PNPLA7Q6ZV29 1317 aa23.99■■□□□ 1.43
SCAMP3-204ENST00000465312 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
SCAMP3-204ENST00000465312 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
SCAMP3-204ENST00000465312 UBR3Q6ZT12 1888 aa23.98■■□□□ 1.43
SCAMP3-204ENST00000465312 ELL2O00472 640 aaPredicted RBP23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 RPS6KA4O75676 772 aa23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 A1BGP04217 495 aa23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 SSFA2P28290 1259 aa23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 PIP4K2AP48426 406 aaPredicted RBP23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 GOLGA2Q08379 1002 aa23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 TRAPPC3LQ5T215 181 aa23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 NECTIN2Q92692 538 aa23.97■■□□□ 1.43
SCAMP3-204ENST00000465312 MYH14Q7Z406 1995 aaKnown RBP23.96■■□□□ 1.43
SCAMP3-204ENST00000465312 QSER1Q2KHR3 1735 aa23.96■■□□□ 1.43
SCAMP3-204ENST00000465312 INTS5Q6P9B9 1019 aaKnown RBP23.96■■□□□ 1.43
SCAMP3-204ENST00000465312 FANCIQ9NVI1 1328 aa23.95■■□□□ 1.42
SCAMP3-204ENST00000465312 RFC4P35249 363 aa23.95■■□□□ 1.42
SCAMP3-204ENST00000465312 COL23A1Q86Y22 540 aaPredicted RBP23.95■■□□□ 1.42
SCAMP3-204ENST00000465312 PDGFDQ9GZP0 370 aaPredicted RBP23.95■■□□□ 1.42
SCAMP3-204ENST00000465312 ZBTB7AO95365 584 aa23.94■■□□□ 1.42
SCAMP3-204ENST00000465312 DUSP27Q5VZP5 1158 aa23.94■■□□□ 1.42
SCAMP3-204ENST00000465312 AMIGO3Q86WK7 504 aa23.94■■□□□ 1.42
SCAMP3-204ENST00000465312 COL15A1P39059 1388 aa23.92■■□□□ 1.42
SCAMP3-204ENST00000465312 ZNF521Q96K83 1311 aa23.92■■□□□ 1.42
SCAMP3-204ENST00000465312 MYL6BP14649 208 aa23.92■■□□□ 1.42
SCAMP3-204ENST00000465312 ADRA2BP18089 450 aa23.92■■□□□ 1.42
SCAMP3-204ENST00000465312 HDGFL1Q5TGJ6 251 aa23.92■■□□□ 1.42
SCAMP3-204ENST00000465312 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
SCAMP3-204ENST00000465312 SOS1Q07889 1333 aaPredicted RBP23.91■■□□□ 1.42
SCAMP3-204ENST00000465312 ARHGEF1Q92888 912 aaKnown RBP23.91■■□□□ 1.42
SCAMP3-204ENST00000465312 CASZ1Q86V15 1759 aa23.91■■□□□ 1.42
SCAMP3-204ENST00000465312 E9PSI1 815 aa23.9■■□□□ 1.42
SCAMP3-204ENST00000465312 MSL1Q68DK7 614 aa23.9■■□□□ 1.42
SCAMP3-204ENST00000465312 C8orf58Q8NAV2 365 aa23.9■■□□□ 1.42
SCAMP3-204ENST00000465312 ATF5Q9Y2D1 282 aaPredicted RBP23.9■■□□□ 1.42
SCAMP3-204ENST00000465312 A0A087WZG4 1122 aa23.89■■□□□ 1.41
SCAMP3-204ENST00000465312 ZPR1O75312 459 aa23.89■■□□□ 1.41
SCAMP3-204ENST00000465312 HOXB7P09629 217 aa23.89■■□□□ 1.41
SCAMP3-204ENST00000465312 IL6STP40189 918 aaPredicted RBP23.89■■□□□ 1.41
SCAMP3-204ENST00000465312 EXOSC9Q06265 439 aaKnown RBP23.88■■□□□ 1.41
SCAMP3-204ENST00000465312 TWISTNBQ3B726 338 aaPredicted RBP23.88■■□□□ 1.41
SCAMP3-204ENST00000465312 C4AP0C0L4 1744 aa23.87■■□□□ 1.41
SCAMP3-204ENST00000465312 TSPYL6Q8N831 410 aa23.87■■□□□ 1.41
SCAMP3-204ENST00000465312 SLC16A10Q8TF71 515 aa23.87■■□□□ 1.41
SCAMP3-204ENST00000465312 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
SCAMP3-204ENST00000465312 MTFR1LQ9H019 292 aa23.87■■□□□ 1.41
SCAMP3-204ENST00000465312 EIF5P55010 431 aaKnown RBP23.86■■□□□ 1.41
SCAMP3-204ENST00000465312 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
SCAMP3-204ENST00000465312 SPON1Q9HCB6 807 aa23.86■■□□□ 1.41
SCAMP3-204ENST00000465312 SRP68Q9UHB9 627 aaKnown RBP23.86■■□□□ 1.41
SCAMP3-204ENST00000465312 TBC1D2BQ9UPU7 963 aa23.86■■□□□ 1.41
SCAMP3-204ENST00000465312 ERBB4Q15303 1308 aa23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 NBPF26B4DH59 902 aa23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 ANXA1P04083 346 aa23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 NBPF10Q6P3W6 841 aaKnown RBP23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 DZIP3Q86Y13 1208 aaKnown RBP23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 NBPF15Q8N660 670 aa23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 CHMP4AQ9BY43 222 aa23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 CHPF2Q9P2E5 772 aa23.85■■□□□ 1.41
SCAMP3-204ENST00000465312 SLFN5Q08AF3 891 aa23.84■■□□□ 1.41
SCAMP3-204ENST00000465312 USPL1Q5W0Q7 1092 aa23.84■■□□□ 1.41
SCAMP3-204ENST00000465312 POLD1P28340 1107 aa23.83■■□□□ 1.41
SCAMP3-204ENST00000465312 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
SCAMP3-204ENST00000465312 KIF6Q6ZMV9 814 aa23.83■■□□□ 1.41
SCAMP3-204ENST00000465312 STK31Q9BXU1 1019 aa23.83■■□□□ 1.41
SCAMP3-204ENST00000465312 ZBED9Q6R2W3 1325 aa23.83■■□□□ 1.4
SCAMP3-204ENST00000465312 USP42Q9H9J4 1324 aaKnown RBP23.83■■□□□ 1.4
SCAMP3-204ENST00000465312 TCERG1O14776 1098 aaKnown RBP23.82■■□□□ 1.4
SCAMP3-204ENST00000465312 AIMP1Q12904 312 aaKnown RBP23.82■■□□□ 1.4
SCAMP3-204ENST00000465312 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
SCAMP3-204ENST00000465312 PPP1R1BQ9UD71 204 aaPredicted RBP23.82■■□□□ 1.4
SCAMP3-204ENST00000465312 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
SCAMP3-204ENST00000465312 PROSER3Q2NL68 480 aa23.81■■□□□ 1.4
SCAMP3-204ENST00000465312 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
SCAMP3-204ENST00000465312 GYS1P13807 737 aa23.79■■□□□ 1.4
SCAMP3-204ENST00000465312 KLHL34Q8N239 644 aa23.78■■□□□ 1.4
SCAMP3-204ENST00000465312 NLGN1Q8N2Q7 840 aa23.78■■□□□ 1.4
SCAMP3-204ENST00000465312 PDIA6Q15084 440 aa23.77■■□□□ 1.4
SCAMP3-204ENST00000465312 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
SCAMP3-204ENST00000465312 XAGE3Q8WTP9 111 aa23.77■■□□□ 1.4
SCAMP3-204ENST00000465312 ZBTB3Q9H5J0 574 aa23.77■■□□□ 1.4
SCAMP3-204ENST00000465312 HYPKQ9NX55 129 aa23.77■■□□□ 1.4
SCAMP3-204ENST00000465312 ZNF652Q9Y2D9 606 aa23.77■■□□□ 1.4
SCAMP3-204ENST00000465312 SCN7AQ01118 1682 aa23.76■■□□□ 1.39
SCAMP3-204ENST00000465312 VAMP4O75379 141 aa23.76■■□□□ 1.39
SCAMP3-204ENST00000465312 FKBP8Q14318 412 aa23.76■■□□□ 1.39
SCAMP3-204ENST00000465312 TTLL7Q6ZT98 887 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 399 ms