RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 RIPK4P57078 832 aa14.02□□□□□ -0.17
C1orf56-202ENST00000465135 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
C1orf56-202ENST00000465135 KDM3BQ7LBC6 1761 aa14.01□□□□□ -0.17
C1orf56-202ENST00000465135 CANXP27824 592 aaKnown RBP14.01□□□□□ -0.17
C1orf56-202ENST00000465135 TMPOP42166 694 aaKnown RBP14.01□□□□□ -0.17
C1orf56-202ENST00000465135 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
C1orf56-202ENST00000465135 NLGN2Q8NFZ4 835 aa14.01□□□□□ -0.17
C1orf56-202ENST00000465135 FMNL2Q96PY5 1086 aa14.01□□□□□ -0.17
C1orf56-202ENST00000465135 SOS1Q07889 1333 aaPredicted RBP14□□□□□ -0.17
C1orf56-202ENST00000465135 SENP3-EIF4A1A0A087X0R7 540 aa14□□□□□ -0.17
C1orf56-202ENST00000465135 GYS1P13807 737 aa14□□□□□ -0.17
C1orf56-202ENST00000465135 RFC4P35249 363 aa14□□□□□ -0.17
C1orf56-202ENST00000465135 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
C1orf56-202ENST00000465135 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
C1orf56-202ENST00000465135 ANP32CO43423 234 aa13.99□□□□□ -0.17
C1orf56-202ENST00000465135 A1BGP04217 495 aa13.99□□□□□ -0.17
C1orf56-202ENST00000465135 MMP10P09238 476 aa13.99□□□□□ -0.17
C1orf56-202ENST00000465135 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
C1orf56-202ENST00000465135 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
C1orf56-202ENST00000465135 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
C1orf56-202ENST00000465135 COL15A1P39059 1388 aa13.98□□□□□ -0.17
C1orf56-202ENST00000465135 USP42Q9H9J4 1324 aaKnown RBP13.98□□□□□ -0.17
C1orf56-202ENST00000465135 STARD3NLO95772 234 aa13.97□□□□□ -0.17
C1orf56-202ENST00000465135 FKBP8Q14318 412 aa13.97□□□□□ -0.17
C1orf56-202ENST00000465135 USPL1Q5W0Q7 1092 aa13.97□□□□□ -0.17
C1orf56-202ENST00000465135 WWC3Q9ULE0 1092 aa13.96□□□□□ -0.17
C1orf56-202ENST00000465135 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
C1orf56-202ENST00000465135 APAF1O14727 1248 aa13.95□□□□□ -0.18
C1orf56-202ENST00000465135 SNRPA1P09661 255 aaKnown RBP13.95□□□□□ -0.18
C1orf56-202ENST00000465135 EIF5P55010 431 aaKnown RBP13.95□□□□□ -0.18
C1orf56-202ENST00000465135 PELP1Q8IZL8 1130 aaKnown RBP13.95□□□□□ -0.18
C1orf56-202ENST00000465135 MRS2Q9HD23 443 aa13.95□□□□□ -0.18
C1orf56-202ENST00000465135 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
C1orf56-202ENST00000465135 ZPR1O75312 459 aa13.94□□□□□ -0.18
C1orf56-202ENST00000465135 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
C1orf56-202ENST00000465135 DDR1Q08345 913 aa13.94□□□□□ -0.18
C1orf56-202ENST00000465135 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
C1orf56-202ENST00000465135 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
C1orf56-202ENST00000465135 TEX13AQ9BXU3 409 aaPredicted RBP13.94□□□□□ -0.18
C1orf56-202ENST00000465135 BCL2L12Q9HB09 334 aa13.94□□□□□ -0.18
C1orf56-202ENST00000465135 TSPYL4Q9UJ04 414 aa13.94□□□□□ -0.18
C1orf56-202ENST00000465135 TBC1D2BQ9UPU7 963 aa13.94□□□□□ -0.18
C1orf56-202ENST00000465135 LMOD3Q0VAK6 560 aa13.93□□□□□ -0.18
C1orf56-202ENST00000465135 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
C1orf56-202ENST00000465135 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
C1orf56-202ENST00000465135 N4BP2Q86UW6 1770 aaPredicted RBP13.93□□□□□ -0.18
C1orf56-202ENST00000465135 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
C1orf56-202ENST00000465135 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
C1orf56-202ENST00000465135 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
C1orf56-202ENST00000465135 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
C1orf56-202ENST00000465135 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
C1orf56-202ENST00000465135 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
C1orf56-202ENST00000465135 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
C1orf56-202ENST00000465135 KIAA1551Q9HCM1 1747 aa13.91□□□□□ -0.18
C1orf56-202ENST00000465135 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
C1orf56-202ENST00000465135 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
C1orf56-202ENST00000465135 GPR162Q16538 588 aa13.91□□□□□ -0.18
C1orf56-202ENST00000465135 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
C1orf56-202ENST00000465135 BICDL1Q6ZP65 573 aa13.91□□□□□ -0.18
C1orf56-202ENST00000465135 CD2APQ9Y5K6 639 aa13.91□□□□□ -0.18
C1orf56-202ENST00000465135 BCORQ6W2J9 1755 aa13.91□□□□□ -0.18
C1orf56-202ENST00000465135 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
C1orf56-202ENST00000465135 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
C1orf56-202ENST00000465135 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
C1orf56-202ENST00000465135 NFIXQ14938 502 aa13.9□□□□□ -0.18
C1orf56-202ENST00000465135 YBX3P16989 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
C1orf56-202ENST00000465135 TM4SF1P30408 202 aa13.89□□□□□ -0.19
C1orf56-202ENST00000465135 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
C1orf56-202ENST00000465135 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
C1orf56-202ENST00000465135 NGEFQ8N5V2 710 aa13.89□□□□□ -0.19
C1orf56-202ENST00000465135 PXDNLA1KZ92 1463 aa13.88□□□□□ -0.19
C1orf56-202ENST00000465135 A0A087WZG4 1122 aa13.88□□□□□ -0.19
C1orf56-202ENST00000465135 CHL1O00533 1208 aa13.88□□□□□ -0.19
C1orf56-202ENST00000465135 CAMTA2O94983 1202 aa13.88□□□□□ -0.19
C1orf56-202ENST00000465135 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
C1orf56-202ENST00000465135 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
C1orf56-202ENST00000465135 MYL6BP14649 208 aa13.87□□□□□ -0.19
C1orf56-202ENST00000465135 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
C1orf56-202ENST00000465135 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
C1orf56-202ENST00000465135 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
C1orf56-202ENST00000465135 NRXN2Q9P2S2 1712 aa13.87□□□□□ -0.19
C1orf56-202ENST00000465135 ANXA1P04083 346 aa13.86□□□□□ -0.19
C1orf56-202ENST00000465135 CCDC24Q8N4L8 307 aa13.86□□□□□ -0.19
C1orf56-202ENST00000465135 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
C1orf56-202ENST00000465135 CHD4Q14839 1912 aa13.86□□□□□ -0.19
C1orf56-202ENST00000465135 CARMIL3Q8ND23 1372 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 SERPINB2P05120 415 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 DPEP1P16444 411 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 PROSER3Q2NL68 480 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 TTLL7Q6ZT98 887 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 BABAM1Q9NWV8 329 aa13.85□□□□□ -0.19
C1orf56-202ENST00000465135 BRCA1P38398 1863 aaKnown RBP13.84□□□□□ -0.19
C1orf56-202ENST00000465135 CHRNA5P30532 468 aa13.84□□□□□ -0.19
C1orf56-202ENST00000465135 HLFQ16534 295 aa13.84□□□□□ -0.19
C1orf56-202ENST00000465135 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
C1orf56-202ENST00000465135 NUP98P52948 1817 aa13.83□□□□□ -0.2
C1orf56-202ENST00000465135 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.2
C1orf56-202ENST00000465135 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
C1orf56-202ENST00000465135 YY1P25490 414 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms