RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TMEM164Q5U3C3 297 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 SENP3-EIF4A1A0A087X0R7 540 aa7.8□□□□□ -1.16
CLK1-208ENST00000464454 PPP1R12BO60237 982 aaPredicted RBP7.8□□□□□ -1.16
CLK1-208ENST00000464454 PHKA2P46019 1235 aa7.8□□□□□ -1.16
CLK1-208ENST00000464454 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
CLK1-208ENST00000464454 USTQ9Y2C2 406 aa7.8□□□□□ -1.16
CLK1-208ENST00000464454 SERTM1A2A2V5 107 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 TERTO14746 1132 aaKnown RBP7.79□□□□□ -1.16
CLK1-208ENST00000464454 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
CLK1-208ENST00000464454 ZNF295-AS1Q8N0V1 137 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
CLK1-208ENST00000464454 GMCL1Q96IK5 515 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 ZDHHC3Q9NYG2 299 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 ZNF232Q9UNY5 417 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 USP3Q9Y6I4 520 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 ATAD2Q6PL18 1390 aa7.79□□□□□ -1.16
CLK1-208ENST00000464454 H7C1W4 665 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 FOXO3O43524 673 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 PPFIA3O75145 1194 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 F11P03951 625 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 ITGA6P23229 1130 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 NOS2P35228 1153 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 HIRAP54198 1017 aaPredicted RBP7.78□□□□□ -1.16
CLK1-208ENST00000464454 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 PGBD3Q8N328 593 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 CLP1Q92989 425 aaKnown RBP7.78□□□□□ -1.16
CLK1-208ENST00000464454 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
CLK1-208ENST00000464454 WEE1P30291 646 aa7.77□□□□□ -1.17
CLK1-208ENST00000464454 FAM69CQ0P6D2 419 aa7.77□□□□□ -1.17
CLK1-208ENST00000464454 POTEAQ6S8J7 498 aa7.77□□□□□ -1.17
CLK1-208ENST00000464454 AIDAQ96BJ3 306 aa7.77□□□□□ -1.17
CLK1-208ENST00000464454 GAS2L1Q99501 681 aaPredicted RBP7.77□□□□□ -1.17
CLK1-208ENST00000464454 H3BM21 787 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 EML1O00423 815 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 C21orf2O43822 256 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 MSX1P28360 303 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
CLK1-208ENST00000464454 RIPOR1Q6ZS17 1223 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 CHMP7Q8WUX9 453 aaPredicted RBP7.76□□□□□ -1.17
CLK1-208ENST00000464454 VTI1AQ96AJ9 217 aa7.76□□□□□ -1.17
CLK1-208ENST00000464454 C2orf49Q9BVC5 232 aaPredicted RBP7.76□□□□□ -1.17
CLK1-208ENST00000464454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLK1-208ENST00000464454 GPC6Q9Y625 555 aaPredicted RBP7.76□□□□□ -1.17
CLK1-208ENST00000464454 PRMT3O60678 531 aa7.75□□□□□ -1.17
CLK1-208ENST00000464454 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
CLK1-208ENST00000464454 TRIM22Q8IYM9 498 aa7.75□□□□□ -1.17
CLK1-208ENST00000464454 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
CLK1-208ENST00000464454 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
CLK1-208ENST00000464454 ATP4AP20648 1035 aa7.74□□□□□ -1.17
CLK1-208ENST00000464454 EFHC2Q5JST6 749 aa7.74□□□□□ -1.17
CLK1-208ENST00000464454 B4GALNT3Q6L9W6 998 aa7.74□□□□□ -1.17
CLK1-208ENST00000464454 NANOS1Q8WY41 292 aaKnown RBP7.74□□□□□ -1.17
CLK1-208ENST00000464454 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
CLK1-208ENST00000464454 GPAMQ9HCL2 828 aa7.74□□□□□ -1.17
CLK1-208ENST00000464454 CXXC1Q9P0U4 656 aaPredicted RBP7.74□□□□□ -1.17
CLK1-208ENST00000464454 LGR5O75473 907 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 OCLNQ16625 522 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 FOXR1Q6PIV2 292 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 BICDL1Q6ZP65 573 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 RETREG2Q8NC44 543 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 IRF7Q92985 503 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 PRIMPOLQ96LW4 560 aa7.73□□□□□ -1.17
CLK1-208ENST00000464454 NUCKS1Q9H1E3 243 aaKnown RBP7.73□□□□□ -1.17
CLK1-208ENST00000464454 CDC14CA4D256 554 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 PTCD1O75127 700 aaKnown RBP7.72□□□□□ -1.17
CLK1-208ENST00000464454 VSIG8P0DPA2 414 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 ATP2B4P23634 1241 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 TXLNAP40222 546 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 VEGFBP49765 207 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 HIF1AQ16665 826 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 ARSJQ5FYB0 599 aaPredicted RBP7.72□□□□□ -1.17
CLK1-208ENST00000464454 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 RHPN1Q8TCX5 695 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 COL26A1Q96A83 441 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 RUBCNLQ9H714 662 aa7.72□□□□□ -1.17
CLK1-208ENST00000464454 FIGNL1Q6PIW4 674 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 NLRP8Q86W28 1048 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 ZNF837Q96EG3 531 aaPredicted RBP7.71□□□□□ -1.18
CLK1-208ENST00000464454 PHACTR1Q9C0D0 580 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 NEUROD4Q9HD90 331 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 HCN4Q9Y3Q4 1203 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 GJA3Q9Y6H8 435 aa7.71□□□□□ -1.18
CLK1-208ENST00000464454 FKBP5Q13451 457 aaPredicted RBP7.7□□□□□ -1.18
CLK1-208ENST00000464454 RTN1Q16799 776 aa7.7□□□□□ -1.18
CLK1-208ENST00000464454 SH3PXD2AQ5TCZ1 1133 aa7.7□□□□□ -1.18
CLK1-208ENST00000464454 TRERF1Q96PN7 1200 aa7.7□□□□□ -1.18
CLK1-208ENST00000464454 ANKIB1Q9P2G1 1089 aa7.7□□□□□ -1.18
CLK1-208ENST00000464454 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
CLK1-208ENST00000464454 DBN1Q16643 649 aa7.69□□□□□ -1.18
CLK1-208ENST00000464454 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
CLK1-208ENST00000464454 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
CLK1-208ENST00000464454 ZIC5Q96T25 663 aa7.69□□□□□ -1.18
CLK1-208ENST00000464454 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
CLK1-208ENST00000464454 PHF24Q9UPV7 400 aa7.68□□□□□ -1.18
CLK1-208ENST00000464454 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms