RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
UFM1-204ENST00000464423 USP16Q9Y5T5 823 aa23.15■■□□□ 1.3
UFM1-204ENST00000464423 CANXP27824 592 aaKnown RBP23.14■■□□□ 1.29
UFM1-204ENST00000464423 STARD3NLO95772 234 aa23.13■■□□□ 1.29
UFM1-204ENST00000464423 A1BGP04217 495 aa23.13■■□□□ 1.29
UFM1-204ENST00000464423 SOS1Q07889 1333 aaPredicted RBP23.12■■□□□ 1.29
UFM1-204ENST00000464423 ADRA2BP18089 450 aa23.12■■□□□ 1.29
UFM1-204ENST00000464423 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
UFM1-204ENST00000464423 ARXQ96QS3 562 aa23.12■■□□□ 1.29
UFM1-204ENST00000464423 SRP68Q9UHB9 627 aaKnown RBP23.12■■□□□ 1.29
UFM1-204ENST00000464423 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
UFM1-204ENST00000464423 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
UFM1-204ENST00000464423 SNRPA1P09661 255 aaKnown RBP23.11■■□□□ 1.29
UFM1-204ENST00000464423 POLD1P28340 1107 aa23.11■■□□□ 1.29
UFM1-204ENST00000464423 RFC4P35249 363 aa23.11■■□□□ 1.29
UFM1-204ENST00000464423 PIP4K2AP48426 406 aaPredicted RBP23.11■■□□□ 1.29
UFM1-204ENST00000464423 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
UFM1-204ENST00000464423 TEX13AQ9BXU3 409 aaPredicted RBP23.11■■□□□ 1.29
UFM1-204ENST00000464423 LAS1LQ9Y4W2 734 aaKnown RBP23.11■■□□□ 1.29
UFM1-204ENST00000464423 COL24A1Q17RW2 1714 aa23.11■■□□□ 1.29
UFM1-204ENST00000464423 C4AP0C0L4 1744 aa23.08■■□□□ 1.29
UFM1-204ENST00000464423 GYS1P13807 737 aa23.08■■□□□ 1.29
UFM1-204ENST00000464423 FHDC1Q9C0D6 1143 aaPredicted RBP23.08■■□□□ 1.29
UFM1-204ENST00000464423 COL15A1P39059 1388 aa23.07■■□□□ 1.28
UFM1-204ENST00000464423 CHL1O00533 1208 aa23.07■■□□□ 1.28
UFM1-204ENST00000464423 GIGYF1O75420 1035 aaPredicted RBP23.07■■□□□ 1.28
UFM1-204ENST00000464423 ZNF330Q9Y3S2 320 aaPredicted RBP23.07■■□□□ 1.28
UFM1-204ENST00000464423 USP42Q9H9J4 1324 aaKnown RBP23.07■■□□□ 1.28
UFM1-204ENST00000464423 EIF5P55010 431 aaKnown RBP23.06■■□□□ 1.28
UFM1-204ENST00000464423 FKBP8Q14318 412 aa23.05■■□□□ 1.28
UFM1-204ENST00000464423 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
UFM1-204ENST00000464423 USPL1Q5W0Q7 1092 aa23.05■■□□□ 1.28
UFM1-204ENST00000464423 KLHL34Q8N239 644 aa23.05■■□□□ 1.28
UFM1-204ENST00000464423 NBPF26B4DH59 902 aa23.04■■□□□ 1.28
UFM1-204ENST00000464423 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
UFM1-204ENST00000464423 NBPF10Q6P3W6 841 aaKnown RBP23.04■■□□□ 1.28
UFM1-204ENST00000464423 NBPF15Q8N660 670 aa23.04■■□□□ 1.28
UFM1-204ENST00000464423 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
UFM1-204ENST00000464423 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
UFM1-204ENST00000464423 MMP10P09238 476 aa23.03■■□□□ 1.28
UFM1-204ENST00000464423 SYT17Q9BSW7 474 aa23.03■■□□□ 1.28
UFM1-204ENST00000464423 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
UFM1-204ENST00000464423 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
UFM1-204ENST00000464423 BCL2L12Q9HB09 334 aa23.02■■□□□ 1.28
UFM1-204ENST00000464423 NARFQ9UHQ1 456 aa23.02■■□□□ 1.28
UFM1-204ENST00000464423 ZPR1O75312 459 aa23.01■■□□□ 1.27
UFM1-204ENST00000464423 ZNF853P0CG23 659 aa23.01■■□□□ 1.27
UFM1-204ENST00000464423 CFAP44Q96MT7 982 aa23.01■■□□□ 1.27
UFM1-204ENST00000464423 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
UFM1-204ENST00000464423 TBC1D2BQ9UPU7 963 aa23.01■■□□□ 1.27
UFM1-204ENST00000464423 WWC1Q8IX03 1113 aa23■■□□□ 1.27
UFM1-204ENST00000464423 MIER1Q8N108 512 aa22.99■■□□□ 1.27
UFM1-204ENST00000464423 CCDC27Q2M243 656 aa22.98■■□□□ 1.27
UFM1-204ENST00000464423 NLGN2Q8NFZ4 835 aa22.98■■□□□ 1.27
UFM1-204ENST00000464423 IFT57Q9NWB7 429 aa22.98■■□□□ 1.27
UFM1-204ENST00000464423 LAMB4A4D0S4 1761 aa22.98■■□□□ 1.27
UFM1-204ENST00000464423 A0A087WZG4 1122 aa22.97■■□□□ 1.27
UFM1-204ENST00000464423 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
UFM1-204ENST00000464423 EIF2S2P20042 333 aaKnown RBP22.97■■□□□ 1.27
UFM1-204ENST00000464423 DDR1Q08345 913 aa22.97■■□□□ 1.27
UFM1-204ENST00000464423 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
UFM1-204ENST00000464423 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
UFM1-204ENST00000464423 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
UFM1-204ENST00000464423 NGEFQ8N5V2 710 aa22.96■■□□□ 1.27
UFM1-204ENST00000464423 CAMTA2O94983 1202 aa22.95■■□□□ 1.26
UFM1-204ENST00000464423 MYL6BP14649 208 aa22.95■■□□□ 1.26
UFM1-204ENST00000464423 TM4SF1P30408 202 aa22.95■■□□□ 1.26
UFM1-204ENST00000464423 GNAI1P63096 354 aa22.95■■□□□ 1.26
UFM1-204ENST00000464423 NFIXQ14938 502 aa22.94■■□□□ 1.26
UFM1-204ENST00000464423 NPM2Q86SE8 214 aaKnown RBP22.94■■□□□ 1.26
UFM1-204ENST00000464423 TSR2Q969E8 191 aaKnown RBP22.94■■□□□ 1.26
UFM1-204ENST00000464423 PARP3Q9Y6F1 533 aa22.94■■□□□ 1.26
UFM1-204ENST00000464423 ANXA1P04083 346 aa22.93■■□□□ 1.26
UFM1-204ENST00000464423 PDIA6Q15084 440 aa22.93■■□□□ 1.26
UFM1-204ENST00000464423 PROSER3Q2NL68 480 aa22.93■■□□□ 1.26
UFM1-204ENST00000464423 BICDL1Q6ZP65 573 aa22.93■■□□□ 1.26
UFM1-204ENST00000464423 POLRMTO00411 1230 aaKnown RBP22.92■■□□□ 1.26
UFM1-204ENST00000464423 DUSP27Q5VZP5 1158 aa22.92■■□□□ 1.26
UFM1-204ENST00000464423 TBC1D9BQ66K14 1250 aa22.92■■□□□ 1.26
UFM1-204ENST00000464423 ELL2O00472 640 aaPredicted RBP22.91■■□□□ 1.26
UFM1-204ENST00000464423 NCBP3Q53F19 620 aaKnown RBP22.91■■□□□ 1.26
UFM1-204ENST00000464423 CD2APQ9Y5K6 639 aa22.91■■□□□ 1.26
UFM1-204ENST00000464423 SCN7AQ01118 1682 aa22.9■■□□□ 1.26
UFM1-204ENST00000464423 TTLL7Q6ZT98 887 aa22.9■■□□□ 1.26
UFM1-204ENST00000464423 LRP10Q7Z4F1 713 aa22.9■■□□□ 1.26
UFM1-204ENST00000464423 C8orf58Q8NAV2 365 aa22.9■■□□□ 1.26
UFM1-204ENST00000464423 HLFQ16534 295 aa22.88■■□□□ 1.25
UFM1-204ENST00000464423 HDGFL1Q5TGJ6 251 aa22.88■■□□□ 1.25
UFM1-204ENST00000464423 SPINK5Q9NQ38 1064 aaPredicted RBP22.88■■□□□ 1.25
UFM1-204ENST00000464423 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
UFM1-204ENST00000464423 TSPYL6Q8N831 410 aa22.87■■□□□ 1.25
UFM1-204ENST00000464423 CHPF2Q9P2E5 772 aa22.87■■□□□ 1.25
UFM1-204ENST00000464423 C10orf71Q711Q0 1435 aa22.87■■□□□ 1.25
UFM1-204ENST00000464423 IL16Q14005 1332 aa22.86■■□□□ 1.25
UFM1-204ENST00000464423 HOXB7P09629 217 aa22.86■■□□□ 1.25
UFM1-204ENST00000464423 WDR63Q8IWG1 891 aa22.86■■□□□ 1.25
UFM1-204ENST00000464423 WWC3Q9ULE0 1092 aa22.86■■□□□ 1.25
UFM1-204ENST00000464423 BCORQ6W2J9 1755 aa22.86■■□□□ 1.25
UFM1-204ENST00000464423 SERPINB2P05120 415 aa22.85■■□□□ 1.25
UFM1-204ENST00000464423 ZBTB3Q9H5J0 574 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms