RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-210ENST00000464313 MYCP01106 439 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-210ENST00000464313 CSB-PGBD3P0DP91 1061 aa8.2□□□□□ -1.1
PTPN12-210ENST00000464313 CTBSQ01459 385 aa8.2□□□□□ -1.1
PTPN12-210ENST00000464313 IRF5Q13568 498 aa8.2□□□□□ -1.1
PTPN12-210ENST00000464313 RSPO4Q2I0M5 234 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-210ENST00000464313 PGBD3Q8N328 593 aa8.2□□□□□ -1.1
PTPN12-210ENST00000464313 FNBP4Q8N3X1 1017 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-210ENST00000464313 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
PTPN12-210ENST00000464313 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
PTPN12-210ENST00000464313 BNIP3LO60238 219 aa8.19□□□□□ -1.1
PTPN12-210ENST00000464313 FGFR3P22607 806 aa8.19□□□□□ -1.1
PTPN12-210ENST00000464313 PRM3Q9NNZ6 103 aa8.19□□□□□ -1.1
PTPN12-210ENST00000464313 CEP126Q9P2H0 1117 aa8.19□□□□□ -1.1
PTPN12-210ENST00000464313 ATXN7L1Q9ULK2 861 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-210ENST00000464313 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-210ENST00000464313 LBRQ14739 615 aaKnown RBP8.18□□□□□ -1.1
PTPN12-210ENST00000464313 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
PTPN12-210ENST00000464313 EFHC2Q5JST6 749 aa8.18□□□□□ -1.1
PTPN12-210ENST00000464313 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
PTPN12-210ENST00000464313 NDFIP2Q9NV92 336 aa8.18□□□□□ -1.1
PTPN12-210ENST00000464313 NKAPLQ5M9Q1 402 aa8.17□□□□□ -1.1
PTPN12-210ENST00000464313 SLCO4C1Q6ZQN7 724 aa8.17□□□□□ -1.1
PTPN12-210ENST00000464313 KRTAP4-7Q9BYR0 210 aa8.17□□□□□ -1.1
PTPN12-210ENST00000464313 POM121CA8CG34 1229 aa8.16□□□□□ -1.1
PTPN12-210ENST00000464313 BTBD6Q96KE9 485 aa8.16□□□□□ -1.1
PTPN12-210ENST00000464313 ETNK1Q9HBU6 452 aa8.16□□□□□ -1.1
PTPN12-210ENST00000464313 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-210ENST00000464313 DGKGP49619 791 aa8.15□□□□□ -1.1
PTPN12-210ENST00000464313 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
PTPN12-210ENST00000464313 RHBDD1Q8TEB9 315 aa8.15□□□□□ -1.1
PTPN12-210ENST00000464313 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
PTPN12-210ENST00000464313 NEURL1BA8MQ27 555 aa8.14□□□□□ -1.11
PTPN12-210ENST00000464313 EPXP11678 715 aa8.14□□□□□ -1.11
PTPN12-210ENST00000464313 PLA2G4AP47712 749 aa8.14□□□□□ -1.11
PTPN12-210ENST00000464313 TLR1Q15399 786 aa8.14□□□□□ -1.11
PTPN12-210ENST00000464313 ESCO1Q5FWF5 840 aa8.14□□□□□ -1.11
PTPN12-210ENST00000464313 PPARGC1BQ86YN6 1023 aaKnown RBP8.13□□□□□ -1.11
PTPN12-210ENST00000464313 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
PTPN12-210ENST00000464313 CRISPLD1Q9H336 500 aa8.13□□□□□ -1.11
PTPN12-210ENST00000464313 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
PTPN12-210ENST00000464313 DYRK3O43781 588 aa8.12□□□□□ -1.11
PTPN12-210ENST00000464313 WWC1Q8IX03 1113 aa8.12□□□□□ -1.11
PTPN12-210ENST00000464313 ZCCHC2Q9C0B9 1178 aaKnown RBP8.12□□□□□ -1.11
PTPN12-210ENST00000464313 HCN2Q9UL51 889 aa8.12□□□□□ -1.11
PTPN12-210ENST00000464313 DOLKQ9UPQ8 538 aa8.12□□□□□ -1.11
PTPN12-210ENST00000464313 ARAFP10398 606 aa8.11□□□□□ -1.11
PTPN12-210ENST00000464313 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
PTPN12-210ENST00000464313 LCE1DQ5T752 114 aa8.11□□□□□ -1.11
PTPN12-210ENST00000464313 ATP4AP20648 1035 aa8.1□□□□□ -1.11
PTPN12-210ENST00000464313 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
PTPN12-210ENST00000464313 PHTF2Q8N3S3 785 aa8.1□□□□□ -1.11
PTPN12-210ENST00000464313 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
PTPN12-210ENST00000464313 KLF15Q9UIH9 416 aa8.1□□□□□ -1.11
PTPN12-210ENST00000464313 PCDHGC4Q9Y5F7 938 aa8.1□□□□□ -1.11
PTPN12-210ENST00000464313 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 USP4Q13107 963 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 CHSY3Q70JA7 882 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 AIDAQ96BJ3 306 aa8.09□□□□□ -1.11
PTPN12-210ENST00000464313 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
PTPN12-210ENST00000464313 CD33P20138 364 aa8.08□□□□□ -1.12
PTPN12-210ENST00000464313 SCNN1DP51172 638 aa8.08□□□□□ -1.12
PTPN12-210ENST00000464313 FIGNL1Q6PIW4 674 aa8.08□□□□□ -1.12
PTPN12-210ENST00000464313 GLMNQ92990 594 aa8.08□□□□□ -1.12
PTPN12-210ENST00000464313 ARID3AQ99856 593 aa8.08□□□□□ -1.12
PTPN12-210ENST00000464313 COBLO75128 1261 aa8.07□□□□□ -1.12
PTPN12-210ENST00000464313 SPATA31C1P0DKV0 1188 aa8.07□□□□□ -1.12
PTPN12-210ENST00000464313 LRP8Q14114 963 aa8.07□□□□□ -1.12
PTPN12-210ENST00000464313 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
PTPN12-210ENST00000464313 A0A1W2PNR3 127 aa8.06□□□□□ -1.12
PTPN12-210ENST00000464313 MAPTP10636 758 aaKnown RBP8.06□□□□□ -1.12
PTPN12-210ENST00000464313 GDF10P55107 478 aa8.06□□□□□ -1.12
PTPN12-210ENST00000464313 TNP2Q05952 138 aa8.06□□□□□ -1.12
PTPN12-210ENST00000464313 SLFNL1Q499Z3 407 aa8.06□□□□□ -1.12
PTPN12-210ENST00000464313 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
PTPN12-210ENST00000464313 KHNYNO15037 678 aaKnown RBP8.05□□□□□ -1.12
PTPN12-210ENST00000464313 INHAP05111 366 aa8.05□□□□□ -1.12
PTPN12-210ENST00000464313 ADH6P28332 368 aa8.05□□□□□ -1.12
PTPN12-210ENST00000464313 HDGFL1Q5TGJ6 251 aa8.05□□□□□ -1.12
PTPN12-210ENST00000464313 NLRP8Q86W28 1048 aa8.05□□□□□ -1.12
PTPN12-210ENST00000464313 TRIM11Q96F44 468 aa8.05□□□□□ -1.12
PTPN12-210ENST00000464313 CALR3Q96L12 384 aaKnown RBP8.05□□□□□ -1.12
PTPN12-210ENST00000464313 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
PTPN12-210ENST00000464313 PCBP4P57723 403 aaKnown RBP8.04□□□□□ -1.12
PTPN12-210ENST00000464313 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPN12-210ENST00000464313 ARSJQ5FYB0 599 aaPredicted RBP8.04□□□□□ -1.12
PTPN12-210ENST00000464313 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
PTPN12-210ENST00000464313 ALG2Q9H553 416 aa8.04□□□□□ -1.12
PTPN12-210ENST00000464313 SERTAD1Q9UHV2 236 aa8.04□□□□□ -1.12
PTPN12-210ENST00000464313 HYAL3O43820 417 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-210ENST00000464313 C1orf216Q8TAB5 229 aa8.03□□□□□ -1.12
PTPN12-210ENST00000464313 USP3Q9Y6I4 520 aa8.03□□□□□ -1.12
PTPN12-210ENST00000464313 SMTNP53814 917 aa8.02□□□□□ -1.13
PTPN12-210ENST00000464313 FAM182BQ5T319 152 aa8.02□□□□□ -1.13
PTPN12-210ENST00000464313 STRN4Q9NRL3 753 aa8.02□□□□□ -1.13
PTPN12-210ENST00000464313 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.13
PTPN12-210ENST00000464313 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms