RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 SOWAHBA6NEL2 793 aa9.58□□□□□ -0.88
VPS8-216ENST00000463687 SLC10A3P09131 477 aa9.58□□□□□ -0.88
VPS8-216ENST00000463687 TBC1D9Q6ZT07 1266 aa9.58□□□□□ -0.88
VPS8-216ENST00000463687 TMEM94Q12767 1356 aa9.58□□□□□ -0.88
VPS8-216ENST00000463687 DIP2AQ14689 1571 aa9.58□□□□□ -0.88
VPS8-216ENST00000463687 POLR1AO95602 1720 aaPredicted RBP9.57□□□□□ -0.88
VPS8-216ENST00000463687 CFAP99D6REC4 459 aa9.57□□□□□ -0.88
VPS8-216ENST00000463687 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
VPS8-216ENST00000463687 STK26Q9P289 416 aa9.57□□□□□ -0.88
VPS8-216ENST00000463687 HPS5Q9UPZ3 1129 aa9.57□□□□□ -0.88
VPS8-216ENST00000463687 LRPPRCP42704 1394 aaKnown RBP9.57□□□□□ -0.88
VPS8-216ENST00000463687 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 LRRC7Q96NW7 1537 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 KIF1BO60333 1816 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
VPS8-216ENST00000463687 IQSEC2Q5JU85 1478 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 ABCC11Q96J66 1382 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 TOM1O60784 492 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 ELOAQ14241 798 aaKnown RBP9.56□□□□□ -0.88
VPS8-216ENST00000463687 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 HLA-CQ95604 372 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
VPS8-216ENST00000463687 UBAP1LF5GYI3 381 aa9.55□□□□□ -0.88
VPS8-216ENST00000463687 PPP4CP60510 307 aa9.55□□□□□ -0.88
VPS8-216ENST00000463687 NR6A1Q15406 480 aa9.55□□□□□ -0.88
VPS8-216ENST00000463687 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
VPS8-216ENST00000463687 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
VPS8-216ENST00000463687 PRAG1Q86YV5 1406 aa9.55□□□□□ -0.88
VPS8-216ENST00000463687 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
VPS8-216ENST00000463687 WBP1LQ9NX94 342 aa9.54□□□□□ -0.88
VPS8-216ENST00000463687 TSR3Q9UJK0 312 aaKnown RBP9.54□□□□□ -0.88
VPS8-216ENST00000463687 PTCH1Q13635 1447 aa9.54□□□□□ -0.88
VPS8-216ENST00000463687 YTHDC2Q9H6S0 1430 aaKnown RBP9.54□□□□□ -0.88
VPS8-216ENST00000463687 NRXN3Q9Y4C0 1643 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 MSH6P52701 1360 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 ERCC3P19447 782 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 NBPF1Q3BBV0 1214 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 USP35Q9P2H5 1018 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 TRAK1Q9UPV9 953 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 TECPR2O15040 1411 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 NWD1Q149M9 1564 aa9.53□□□□□ -0.88
VPS8-216ENST00000463687 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
VPS8-216ENST00000463687 CFHP08603 1231 aa9.52□□□□□ -0.89
VPS8-216ENST00000463687 ATF3P18847 181 aa9.52□□□□□ -0.89
VPS8-216ENST00000463687 NBPF8Q3BBV2 869 aa9.52□□□□□ -0.89
VPS8-216ENST00000463687 WAPLQ7Z5K2 1190 aa9.52□□□□□ -0.89
VPS8-216ENST00000463687 FAM135BQ49AJ0 1406 aa9.51□□□□□ -0.89
VPS8-216ENST00000463687 PPLO60437 1756 aa9.51□□□□□ -0.89
VPS8-216ENST00000463687 RBM47A0AV96 593 aaKnown RBP9.51□□□□□ -0.89
VPS8-216ENST00000463687 NR1H3Q13133 447 aa9.51□□□□□ -0.89
VPS8-216ENST00000463687 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
VPS8-216ENST00000463687 POGKQ9P215 609 aa9.51□□□□□ -0.89
VPS8-216ENST00000463687 NOVA2Q9UNW9 492 aaKnown RBP9.51□□□□□ -0.89
VPS8-216ENST00000463687 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
VPS8-216ENST00000463687 ARID4AP29374 1257 aaPredicted RBP9.5□□□□□ -0.89
VPS8-216ENST00000463687 TMEM164Q5U3C3 297 aa9.5□□□□□ -0.89
VPS8-216ENST00000463687 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
VPS8-216ENST00000463687 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
VPS8-216ENST00000463687 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
VPS8-216ENST00000463687 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
VPS8-216ENST00000463687 APLP1P51693 650 aa9.49□□□□□ -0.89
VPS8-216ENST00000463687 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
VPS8-216ENST00000463687 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
VPS8-216ENST00000463687 ASXL1Q8IXJ9 1541 aa9.49□□□□□ -0.89
VPS8-216ENST00000463687 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
VPS8-216ENST00000463687 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
VPS8-216ENST00000463687 FUT2Q10981 343 aa9.48□□□□□ -0.89
VPS8-216ENST00000463687 SAFB2Q14151 953 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS8-216ENST00000463687 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
VPS8-216ENST00000463687 DCCP43146 1447 aa9.48□□□□□ -0.89
VPS8-216ENST00000463687 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
VPS8-216ENST00000463687 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 SKIP12755 728 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 ZMIZ1Q9ULJ6 1067 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 IFT172Q9UG01 1749 aa9.47□□□□□ -0.89
VPS8-216ENST00000463687 DLC1Q96QB1 1528 aa9.46□□□□□ -0.89
VPS8-216ENST00000463687 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.89
VPS8-216ENST00000463687 UNCXA6NJT0 531 aa9.46□□□□□ -0.9
VPS8-216ENST00000463687 ZBBXA8MT70 800 aa9.46□□□□□ -0.9
VPS8-216ENST00000463687 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
VPS8-216ENST00000463687 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.9
VPS8-216ENST00000463687 LARP1Q6PKG0 1096 aaKnown RBP9.46□□□□□ -0.9
VPS8-216ENST00000463687 RETREG3Q86VR2 466 aa9.46□□□□□ -0.9
VPS8-216ENST00000463687 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
VPS8-216ENST00000463687 CENPJQ9HC77 1338 aaPredicted RBP9.46□□□□□ -0.9
VPS8-216ENST00000463687 STRCP1A6NGW2 1772 aa9.45□□□□□ -0.9
VPS8-216ENST00000463687 PUS10Q3MIT2 529 aaKnown RBP9.45□□□□□ -0.9
VPS8-216ENST00000463687 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
VPS8-216ENST00000463687 EIF3AQ14152 1382 aaKnown RBP9.45□□□□□ -0.9
VPS8-216ENST00000463687 LAMC1P11047 1609 aa9.45□□□□□ -0.9
VPS8-216ENST00000463687 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
VPS8-216ENST00000463687 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
VPS8-216ENST00000463687 USP17L5A8MUK1 530 aa9.44□□□□□ -0.9
VPS8-216ENST00000463687 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
VPS8-216ENST00000463687 HMGB1P09429 215 aaKnown RBP9.44□□□□□ -0.9
VPS8-216ENST00000463687 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 293.1 ms