RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
TMEM254-208ENST00000463209 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
TMEM254-208ENST00000463209 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
TMEM254-208ENST00000463209 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
TMEM254-208ENST00000463209 MMP10P09238 476 aa11.41□□□□□ -0.58
TMEM254-208ENST00000463209 GYS1P13807 737 aa11.41□□□□□ -0.58
TMEM254-208ENST00000463209 RFC4P35249 363 aa11.41□□□□□ -0.58
TMEM254-208ENST00000463209 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM254-208ENST00000463209 ADAMTS8Q9UP79 889 aa11.41□□□□□ -0.58
TMEM254-208ENST00000463209 ZNF330Q9Y3S2 320 aaPredicted RBP11.41□□□□□ -0.58
TMEM254-208ENST00000463209 LAMB4A4D0S4 1761 aa11.41□□□□□ -0.58
TMEM254-208ENST00000463209 COL15A1P39059 1388 aa11.41□□□□□ -0.58
TMEM254-208ENST00000463209 SOS1Q07889 1333 aaPredicted RBP11.4□□□□□ -0.58
TMEM254-208ENST00000463209 FMNL2Q96PY5 1086 aa11.4□□□□□ -0.58
TMEM254-208ENST00000463209 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
TMEM254-208ENST00000463209 SCN7AQ01118 1682 aa11.4□□□□□ -0.59
TMEM254-208ENST00000463209 USP42Q9H9J4 1324 aaKnown RBP11.39□□□□□ -0.59
TMEM254-208ENST00000463209 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
TMEM254-208ENST00000463209 A1BGP04217 495 aa11.39□□□□□ -0.59
TMEM254-208ENST00000463209 RIPK4P57078 832 aa11.39□□□□□ -0.59
TMEM254-208ENST00000463209 FKBP8Q14318 412 aa11.39□□□□□ -0.59
TMEM254-208ENST00000463209 USPL1Q5W0Q7 1092 aa11.39□□□□□ -0.59
TMEM254-208ENST00000463209 HTATSF1O43719 755 aaKnown RBP11.38□□□□□ -0.59
TMEM254-208ENST00000463209 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
TMEM254-208ENST00000463209 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
TMEM254-208ENST00000463209 DDR1Q08345 913 aa11.38□□□□□ -0.59
TMEM254-208ENST00000463209 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
TMEM254-208ENST00000463209 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
TMEM254-208ENST00000463209 BCORQ6W2J9 1755 aa11.37□□□□□ -0.59
TMEM254-208ENST00000463209 TAF7Q15545 349 aaPredicted RBP11.37□□□□□ -0.59
TMEM254-208ENST00000463209 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
TMEM254-208ENST00000463209 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
TMEM254-208ENST00000463209 STARD3NLO95772 234 aa11.36□□□□□ -0.59
TMEM254-208ENST00000463209 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMEM254-208ENST00000463209 GPR162Q16538 588 aa11.36□□□□□ -0.59
TMEM254-208ENST00000463209 BICDL1Q6ZP65 573 aa11.36□□□□□ -0.59
TMEM254-208ENST00000463209 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
TMEM254-208ENST00000463209 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
TMEM254-208ENST00000463209 TBC1D2BQ9UPU7 963 aa11.36□□□□□ -0.59
TMEM254-208ENST00000463209 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
TMEM254-208ENST00000463209 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
TMEM254-208ENST00000463209 ZPR1O75312 459 aa11.35□□□□□ -0.59
TMEM254-208ENST00000463209 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
TMEM254-208ENST00000463209 NLGN1Q8N2Q7 840 aa11.35□□□□□ -0.59
TMEM254-208ENST00000463209 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
TMEM254-208ENST00000463209 LAS1LQ9Y4W2 734 aaKnown RBP11.35□□□□□ -0.59
TMEM254-208ENST00000463209 PXDNLA1KZ92 1463 aa11.35□□□□□ -0.59
TMEM254-208ENST00000463209 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 NBPF26B4DH59 902 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 ANP32CO43423 234 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 EIF5P55010 431 aaKnown RBP11.34□□□□□ -0.59
TMEM254-208ENST00000463209 KRT24Q2M2I5 525 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 NBPF10Q6P3W6 841 aaKnown RBP11.34□□□□□ -0.59
TMEM254-208ENST00000463209 NBPF15Q8N660 670 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 NARFQ9UHQ1 456 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 TSPYL4Q9UJ04 414 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
TMEM254-208ENST00000463209 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
TMEM254-208ENST00000463209 APAF1O14727 1248 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
TMEM254-208ENST00000463209 NFIXQ14938 502 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
TMEM254-208ENST00000463209 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
TMEM254-208ENST00000463209 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
TMEM254-208ENST00000463209 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
TMEM254-208ENST00000463209 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
TMEM254-208ENST00000463209 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
TMEM254-208ENST00000463209 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
TMEM254-208ENST00000463209 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
TMEM254-208ENST00000463209 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-208ENST00000463209 CAMTA2O94983 1202 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 MYL6BP14649 208 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 DPEP1P16444 411 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 YY1P25490 414 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 TM4SF1P30408 202 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 CHRNA5P30532 468 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-208ENST00000463209 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
TMEM254-208ENST00000463209 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
TMEM254-208ENST00000463209 ANKRD31Q8N7Z5 1873 aa11.31□□□□□ -0.6
TMEM254-208ENST00000463209 COL11A2P13942 1736 aaPredicted RBP11.3□□□□□ -0.6
TMEM254-208ENST00000463209 A0A087WZG4 1122 aa11.3□□□□□ -0.6
TMEM254-208ENST00000463209 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
TMEM254-208ENST00000463209 ANXA1P04083 346 aa11.3□□□□□ -0.6
TMEM254-208ENST00000463209 GOLGB1Q14789 3259 aaKnown RBP11.3□□□□□ -0.6
TMEM254-208ENST00000463209 UTRNP46939 3433 aa11.29□□□□□ -0.6
TMEM254-208ENST00000463209 SERPINB2P05120 415 aa11.29□□□□□ -0.6
TMEM254-208ENST00000463209 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
TMEM254-208ENST00000463209 PROSER3Q2NL68 480 aa11.29□□□□□ -0.6
TMEM254-208ENST00000463209 CHD4Q14839 1912 aa11.29□□□□□ -0.6
TMEM254-208ENST00000463209 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
TMEM254-208ENST00000463209 HLFQ16534 295 aa11.28□□□□□ -0.6
TMEM254-208ENST00000463209 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
TMEM254-208ENST00000463209 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
TMEM254-208ENST00000463209 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms