RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 CICQ96RK0 1608 aaPredicted RBP23.79■■□□□ 1.4
LINC00960-201ENST00000463183 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
LINC00960-201ENST00000463183 ZPR1O75312 459 aa23.79■■□□□ 1.4
LINC00960-201ENST00000463183 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
LINC00960-201ENST00000463183 MIS18AQ9NYP9 233 aa23.79■■□□□ 1.4
LINC00960-201ENST00000463183 USP42Q9H9J4 1324 aaKnown RBP23.78■■□□□ 1.4
LINC00960-201ENST00000463183 HTATSF1O43719 755 aaKnown RBP23.78■■□□□ 1.4
LINC00960-201ENST00000463183 FKBP8Q14318 412 aa23.78■■□□□ 1.4
LINC00960-201ENST00000463183 USPL1Q5W0Q7 1092 aa23.78■■□□□ 1.4
LINC00960-201ENST00000463183 CCDC146Q8IYE0 955 aa23.78■■□□□ 1.4
LINC00960-201ENST00000463183 THUMPD2Q9BTF0 503 aaKnown RBP23.78■■□□□ 1.4
LINC00960-201ENST00000463183 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
LINC00960-201ENST00000463183 COL15A1P39059 1388 aa23.77■■□□□ 1.4
LINC00960-201ENST00000463183 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
LINC00960-201ENST00000463183 PARP3Q9Y6F1 533 aa23.77■■□□□ 1.4
LINC00960-201ENST00000463183 PRAMEF22A3QJZ6 481 aa23.74■■□□□ 1.39
LINC00960-201ENST00000463183 A1BGP04217 495 aa23.74■■□□□ 1.39
LINC00960-201ENST00000463183 TAF7Q15545 349 aaPredicted RBP23.74■■□□□ 1.39
LINC00960-201ENST00000463183 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
LINC00960-201ENST00000463183 DLG5Q8TDM6 1919 aa23.73■■□□□ 1.39
LINC00960-201ENST00000463183 YBX3P16989 372 aaKnown RBP eCLIP23.73■■□□□ 1.39
LINC00960-201ENST00000463183 PIP4K2AP48426 406 aaPredicted RBP23.73■■□□□ 1.39
LINC00960-201ENST00000463183 RRP7AQ9Y3A4 280 aaKnown RBP23.73■■□□□ 1.39
LINC00960-201ENST00000463183 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
LINC00960-201ENST00000463183 RIPK4P57078 832 aa23.72■■□□□ 1.39
LINC00960-201ENST00000463183 NEUROD2Q15784 382 aa23.72■■□□□ 1.39
LINC00960-201ENST00000463183 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
LINC00960-201ENST00000463183 NARFQ9UHQ1 456 aa23.71■■□□□ 1.39
LINC00960-201ENST00000463183 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
LINC00960-201ENST00000463183 DDR1Q08345 913 aa23.7■■□□□ 1.38
LINC00960-201ENST00000463183 SNRPA1P09661 255 aaKnown RBP23.69■■□□□ 1.38
LINC00960-201ENST00000463183 EIF5P55010 431 aaKnown RBP23.69■■□□□ 1.38
LINC00960-201ENST00000463183 BICDL1Q6ZP65 573 aa23.69■■□□□ 1.38
LINC00960-201ENST00000463183 TBC1D2BQ9UPU7 963 aa23.69■■□□□ 1.38
LINC00960-201ENST00000463183 A0A087WZG4 1122 aa23.67■■□□□ 1.38
LINC00960-201ENST00000463183 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
LINC00960-201ENST00000463183 ADAMTS8Q9UP79 889 aa23.67■■□□□ 1.38
LINC00960-201ENST00000463183 A0A0G2JLW4 131 aa23.66■■□□□ 1.38
LINC00960-201ENST00000463183 GRIN3BO60391 1043 aa23.66■■□□□ 1.38
LINC00960-201ENST00000463183 IL6STP40189 918 aaPredicted RBP23.66■■□□□ 1.38
LINC00960-201ENST00000463183 TMPOP42166 694 aaKnown RBP23.66■■□□□ 1.38
LINC00960-201ENST00000463183 BCL2L12Q9HB09 334 aa23.66■■□□□ 1.38
LINC00960-201ENST00000463183 C10orf71Q711Q0 1435 aa23.66■■□□□ 1.38
LINC00960-201ENST00000463183 POLRMTO00411 1230 aaKnown RBP23.65■■□□□ 1.38
LINC00960-201ENST00000463183 NFIXQ14938 502 aa23.65■■□□□ 1.38
LINC00960-201ENST00000463183 RUNDC1Q96C34 613 aa23.64■■□□□ 1.38
LINC00960-201ENST00000463183 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.37
LINC00960-201ENST00000463183 DPEP1P16444 411 aa23.63■■□□□ 1.37
LINC00960-201ENST00000463183 TM4SF1P30408 202 aa23.63■■□□□ 1.37
LINC00960-201ENST00000463183 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
LINC00960-201ENST00000463183 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
LINC00960-201ENST00000463183 N4BP2Q86UW6 1770 aaPredicted RBP23.62■■□□□ 1.37
LINC00960-201ENST00000463183 TGFB2P61812 414 aa23.61■■□□□ 1.37
LINC00960-201ENST00000463183 DZIP3Q86Y13 1208 aaKnown RBP23.61■■□□□ 1.37
LINC00960-201ENST00000463183 BCS1LQ9Y276 419 aa23.61■■□□□ 1.37
LINC00960-201ENST00000463183 CHD4Q14839 1912 aa23.61■■□□□ 1.37
LINC00960-201ENST00000463183 EIF4A1P60842 406 aaKnown RBP23.6■■□□□ 1.37
LINC00960-201ENST00000463183 NGEFQ8N5V2 710 aa23.6■■□□□ 1.37
LINC00960-201ENST00000463183 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
LINC00960-201ENST00000463183 SERPINB2P05120 415 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 TBC1D9BQ66K14 1250 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 KDM3BQ7LBC6 1761 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 NBPF26B4DH59 902 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 CHRNA5P30532 468 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 CCDC184Q52MB2 194 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 NBPF10Q6P3W6 841 aaKnown RBP23.59■■□□□ 1.37
LINC00960-201ENST00000463183 NBPF15Q8N660 670 aa23.59■■□□□ 1.37
LINC00960-201ENST00000463183 KIF13BQ9NQT8 1826 aa23.58■■□□□ 1.36
LINC00960-201ENST00000463183 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.36
LINC00960-201ENST00000463183 CAMTA2O94983 1202 aa23.58■■□□□ 1.36
LINC00960-201ENST00000463183 NPHP1O15259 732 aa23.57■■□□□ 1.36
LINC00960-201ENST00000463183 ANP32CO43423 234 aa23.57■■□□□ 1.36
LINC00960-201ENST00000463183 CCDC24Q8N4L8 307 aa23.57■■□□□ 1.36
LINC00960-201ENST00000463183 SENP3-EIF4A1A0A087X0R7 540 aa23.56■■□□□ 1.36
LINC00960-201ENST00000463183 ZNF784Q8NCA9 323 aaPredicted RBP23.56■■□□□ 1.36
LINC00960-201ENST00000463183 KIAA1551Q9HCM1 1747 aa23.55■■□□□ 1.36
LINC00960-201ENST00000463183 SCN7AQ01118 1682 aa23.55■■□□□ 1.36
LINC00960-201ENST00000463183 MYL6BP14649 208 aa23.55■■□□□ 1.36
LINC00960-201ENST00000463183 TRIM35Q9UPQ4 493 aa23.55■■□□□ 1.36
LINC00960-201ENST00000463183 APAF1O14727 1248 aa23.54■■□□□ 1.36
LINC00960-201ENST00000463183 EIF2S2P20042 333 aaKnown RBP23.54■■□□□ 1.36
LINC00960-201ENST00000463183 SETDB2Q96T68 719 aa23.54■■□□□ 1.36
LINC00960-201ENST00000463183 CARMIL3Q8ND23 1372 aa23.53■■□□□ 1.36
LINC00960-201ENST00000463183 AFDNP55196 1824 aaKnown RBP23.53■■□□□ 1.36
LINC00960-201ENST00000463183 PIM2Q9P1W9 311 aa23.53■■□□□ 1.36
LINC00960-201ENST00000463183 LAMB4A4D0S4 1761 aa23.52■■□□□ 1.36
LINC00960-201ENST00000463183 KCNA3P22001 575 aa23.52■■□□□ 1.36
LINC00960-201ENST00000463183 NECTIN2Q92692 538 aa23.52■■□□□ 1.36
LINC00960-201ENST00000463183 FAM177BA6PVY3 158 aa23.51■■□□□ 1.35
LINC00960-201ENST00000463183 DALRD3Q5D0E6 543 aaKnown RBP23.51■■□□□ 1.35
LINC00960-201ENST00000463183 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
LINC00960-201ENST00000463183 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
LINC00960-201ENST00000463183 ZNF652Q9Y2D9 606 aa23.51■■□□□ 1.35
LINC00960-201ENST00000463183 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
LINC00960-201ENST00000463183 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
LINC00960-201ENST00000463183 PRR5LQ6MZQ0 368 aa23.49■■□□□ 1.35
LINC00960-201ENST00000463183 BCORQ6W2J9 1755 aa23.48■■□□□ 1.35
LINC00960-201ENST00000463183 HLFQ16534 295 aa23.48■■□□□ 1.35
LINC00960-201ENST00000463183 CNBD1Q8NA66 436 aa23.48■■□□□ 1.35
LINC00960-201ENST00000463183 NIP7Q9Y221 180 aaKnown RBP eCLIP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms