RNA–Protein interactions for RNA: ENST00000461620.1

SLC48A1-203, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 459 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-203ENST00000461620 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
SLC48A1-203ENST00000461620 NPM2Q86SE8 214 aaKnown RBP20.54■□□□□ 0.88
SLC48A1-203ENST00000461620 E9PSI1 815 aa20.53■□□□□ 0.88
SLC48A1-203ENST00000461620 GNPATO15228 680 aa20.53■□□□□ 0.88
SLC48A1-203ENST00000461620 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
SLC48A1-203ENST00000461620 TRAPPC3LQ5T215 181 aa20.52■□□□□ 0.88
SLC48A1-203ENST00000461620 INTS5Q6P9B9 1019 aaKnown RBP20.52■□□□□ 0.88
SLC48A1-203ENST00000461620 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
SLC48A1-203ENST00000461620 TAF1LQ8IZX4 1826 aa20.51■□□□□ 0.87
SLC48A1-203ENST00000461620 A0A087WZG4 1122 aa20.51■□□□□ 0.87
SLC48A1-203ENST00000461620 IL6STP40189 918 aaPredicted RBP20.51■□□□□ 0.87
SLC48A1-203ENST00000461620 HNRNPUQ00839 825 aaKnown RBP eCLIP20.5■□□□□ 0.87
SLC48A1-203ENST00000461620 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
SLC48A1-203ENST00000461620 SENP3-EIF4A1A0A087X0R7 540 aa20.49■□□□□ 0.87
SLC48A1-203ENST00000461620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.49■□□□□ 0.87
SLC48A1-203ENST00000461620 DUSP27Q5VZP5 1158 aa20.49■□□□□ 0.87
SLC48A1-203ENST00000461620 TJP1Q07157 1748 aa20.49■□□□□ 0.87
SLC48A1-203ENST00000461620 COL5A3P25940 1745 aaPredicted RBP20.48■□□□□ 0.87
SLC48A1-203ENST00000461620 ZBTB1Q9Y2K1 713 aa20.48■□□□□ 0.87
SLC48A1-203ENST00000461620 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
SLC48A1-203ENST00000461620 PSDA5PKW4 1024 aaPredicted RBP20.47■□□□□ 0.87
SLC48A1-203ENST00000461620 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
SLC48A1-203ENST00000461620 RFC4P35249 363 aa20.47■□□□□ 0.87
SLC48A1-203ENST00000461620 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
SLC48A1-203ENST00000461620 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 RGL2O15211 777 aa20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 A1BGP04217 495 aa20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 SLFN5Q08AF3 891 aa20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 COL23A1Q86Y22 540 aaPredicted RBP20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 QSER1Q2KHR3 1735 aa20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 ZBED9Q6R2W3 1325 aa20.46■□□□□ 0.87
SLC48A1-203ENST00000461620 MSH5O43196 834 aa20.45■□□□□ 0.86
SLC48A1-203ENST00000461620 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
SLC48A1-203ENST00000461620 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
SLC48A1-203ENST00000461620 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
SLC48A1-203ENST00000461620 PHF14O94880 888 aa20.44■□□□□ 0.86
SLC48A1-203ENST00000461620 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
SLC48A1-203ENST00000461620 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
SLC48A1-203ENST00000461620 CCDC30Q5VVM6 783 aa20.44■□□□□ 0.86
SLC48A1-203ENST00000461620 DBF4Q9UBU7 674 aaPredicted RBP20.44■□□□□ 0.86
SLC48A1-203ENST00000461620 ZPR1O75312 459 aa20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 NLGN1Q8N2Q7 840 aa20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 DDX21Q9NR30 783 aaKnown RBP eCLIP20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 COL15A1P39059 1388 aa20.43■□□□□ 0.86
SLC48A1-203ENST00000461620 CT47B1P0C2W7 299 aaPredicted RBP20.42■□□□□ 0.86
SLC48A1-203ENST00000461620 SPON1Q9HCB6 807 aa20.42■□□□□ 0.86
SLC48A1-203ENST00000461620 NARFQ9UHQ1 456 aa20.42■□□□□ 0.86
SLC48A1-203ENST00000461620 KRT24Q2M2I5 525 aa20.41■□□□□ 0.86
SLC48A1-203ENST00000461620 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
SLC48A1-203ENST00000461620 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
SLC48A1-203ENST00000461620 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
SLC48A1-203ENST00000461620 NBPF26B4DH59 902 aa20.4■□□□□ 0.86
SLC48A1-203ENST00000461620 EXOSC9Q06265 439 aaKnown RBP20.4■□□□□ 0.86
SLC48A1-203ENST00000461620 NBPF10Q6P3W6 841 aaKnown RBP20.4■□□□□ 0.86
SLC48A1-203ENST00000461620 MYH14Q7Z406 1995 aaKnown RBP20.4■□□□□ 0.86
SLC48A1-203ENST00000461620 NBPF15Q8N660 670 aa20.4■□□□□ 0.86
SLC48A1-203ENST00000461620 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
SLC48A1-203ENST00000461620 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
SLC48A1-203ENST00000461620 ELL2O00472 640 aaPredicted RBP20.39■□□□□ 0.85
SLC48A1-203ENST00000461620 PDIA6Q15084 440 aa20.39■□□□□ 0.85
SLC48A1-203ENST00000461620 CLEC4GQ6UXB4 293 aa20.39■□□□□ 0.85
SLC48A1-203ENST00000461620 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.85
SLC48A1-203ENST00000461620 VAMP4O75379 141 aa20.38■□□□□ 0.85
SLC48A1-203ENST00000461620 POLD1P28340 1107 aa20.38■□□□□ 0.85
SLC48A1-203ENST00000461620 DZIP3Q86Y13 1208 aaKnown RBP20.38■□□□□ 0.85
SLC48A1-203ENST00000461620 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
SLC48A1-203ENST00000461620 ZNF652Q9Y2D9 606 aa20.38■□□□□ 0.85
SLC48A1-203ENST00000461620 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
SLC48A1-203ENST00000461620 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
SLC48A1-203ENST00000461620 MYL6BP14649 208 aa20.37■□□□□ 0.85
SLC48A1-203ENST00000461620 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
SLC48A1-203ENST00000461620 GYS1P13807 737 aa20.36■□□□□ 0.85
SLC48A1-203ENST00000461620 CDCA7LQ96GN5 454 aa20.36■□□□□ 0.85
SLC48A1-203ENST00000461620 PDGFDQ9GZP0 370 aaPredicted RBP20.36■□□□□ 0.85
SLC48A1-203ENST00000461620 CHPF2Q9P2E5 772 aa20.36■□□□□ 0.85
SLC48A1-203ENST00000461620 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
SLC48A1-203ENST00000461620 ZBTB7AO95365 584 aa20.35■□□□□ 0.85
SLC48A1-203ENST00000461620 ARXQ96QS3 562 aa20.35■□□□□ 0.85
SLC48A1-203ENST00000461620 USPL1Q5W0Q7 1092 aa20.34■□□□□ 0.85
SLC48A1-203ENST00000461620 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
SLC48A1-203ENST00000461620 NECTIN2Q92692 538 aa20.34■□□□□ 0.85
SLC48A1-203ENST00000461620 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
SLC48A1-203ENST00000461620 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
SLC48A1-203ENST00000461620 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.85
SLC48A1-203ENST00000461620 CAMTA2O94983 1202 aa20.33■□□□□ 0.85
SLC48A1-203ENST00000461620 DDX58O95786 925 aaKnown RBP20.33■□□□□ 0.85
SLC48A1-203ENST00000461620 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
SLC48A1-203ENST00000461620 SMIM5Q71RC9 77 aa20.33■□□□□ 0.85
SLC48A1-203ENST00000461620 ATF5Q9Y2D1 282 aaPredicted RBP20.32■□□□□ 0.84
SLC48A1-203ENST00000461620 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
SLC48A1-203ENST00000461620 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
SLC48A1-203ENST00000461620 HSP90AB3PQ58FF7 597 aa20.31■□□□□ 0.84
SLC48A1-203ENST00000461620 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
SLC48A1-203ENST00000461620 XAGE3Q8WTP9 111 aa20.31■□□□□ 0.84
SLC48A1-203ENST00000461620 SRP68Q9UHB9 627 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms