RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ARXQ96QS3 562 aa13.89□□□□□ -0.19
TRAPPC12-213ENST00000461577 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
TRAPPC12-213ENST00000461577 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
TRAPPC12-213ENST00000461577 APAF1O14727 1248 aa13.88□□□□□ -0.19
TRAPPC12-213ENST00000461577 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
TRAPPC12-213ENST00000461577 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-213ENST00000461577 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-213ENST00000461577 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
TRAPPC12-213ENST00000461577 ZBTB1Q9Y2K1 713 aa13.87□□□□□ -0.19
TRAPPC12-213ENST00000461577 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC12-213ENST00000461577 C4AP0C0L4 1744 aa13.87□□□□□ -0.19
TRAPPC12-213ENST00000461577 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
TRAPPC12-213ENST00000461577 LAS1LQ9Y4W2 734 aaKnown RBP13.86□□□□□ -0.19
TRAPPC12-213ENST00000461577 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-213ENST00000461577 BABAM1Q9NWV8 329 aa13.85□□□□□ -0.19
TRAPPC12-213ENST00000461577 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
TRAPPC12-213ENST00000461577 COL15A1P39059 1388 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 A0A087WZG4 1122 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 ZPR1O75312 459 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 A1BGP04217 495 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 EIF4A1P60842 406 aaKnown RBP13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 FAM9BQ8IZU0 186 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-213ENST00000461577 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.19
TRAPPC12-213ENST00000461577 GYS1P13807 737 aa13.83□□□□□ -0.2
TRAPPC12-213ENST00000461577 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-213ENST00000461577 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-213ENST00000461577 USP42Q9H9J4 1324 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-213ENST00000461577 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
TRAPPC12-213ENST00000461577 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-213ENST00000461577 EIF5P55010 431 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-213ENST00000461577 SYT17Q9BSW7 474 aa13.82□□□□□ -0.2
TRAPPC12-213ENST00000461577 NARFQ9UHQ1 456 aa13.82□□□□□ -0.2
TRAPPC12-213ENST00000461577 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
TRAPPC12-213ENST00000461577 GIGYF1O75420 1035 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-213ENST00000461577 MMP10P09238 476 aa13.81□□□□□ -0.2
TRAPPC12-213ENST00000461577 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
TRAPPC12-213ENST00000461577 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
TRAPPC12-213ENST00000461577 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
TRAPPC12-213ENST00000461577 CHL1O00533 1208 aa13.8□□□□□ -0.2
TRAPPC12-213ENST00000461577 PIP4K2AP48426 406 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-213ENST00000461577 FKBP8Q14318 412 aa13.8□□□□□ -0.2
TRAPPC12-213ENST00000461577 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
TRAPPC12-213ENST00000461577 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
TRAPPC12-213ENST00000461577 GNAI1P63096 354 aa13.78□□□□□ -0.2
TRAPPC12-213ENST00000461577 CCDC27Q2M243 656 aa13.78□□□□□ -0.2
TRAPPC12-213ENST00000461577 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
TRAPPC12-213ENST00000461577 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
TRAPPC12-213ENST00000461577 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC12-213ENST00000461577 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 DZIP3Q86Y13 1208 aaKnown RBP13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 NBPF15Q8N660 670 aa13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 MBIPQ9NS73 344 aa13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 CD2APQ9Y5K6 639 aa13.77□□□□□ -0.21
TRAPPC12-213ENST00000461577 SCN7AQ01118 1682 aa13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 NGEFQ8N5V2 710 aa13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
TRAPPC12-213ENST00000461577 MYL6BP14649 208 aa13.75□□□□□ -0.21
TRAPPC12-213ENST00000461577 TM4SF1P30408 202 aa13.75□□□□□ -0.21
TRAPPC12-213ENST00000461577 KRT24Q2M2I5 525 aa13.75□□□□□ -0.21
TRAPPC12-213ENST00000461577 NLGN2Q8NFZ4 835 aa13.75□□□□□ -0.21
TRAPPC12-213ENST00000461577 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
TRAPPC12-213ENST00000461577 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 CAMTA2O94983 1202 aa13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 DDR1Q08345 913 aa13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 NFIXQ14938 502 aa13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 BICDL1Q6ZP65 573 aa13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 NECTIN2Q92692 538 aa13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 ZNF652Q9Y2D9 606 aa13.74□□□□□ -0.21
TRAPPC12-213ENST00000461577 HOXB7P09629 217 aa13.73□□□□□ -0.21
TRAPPC12-213ENST00000461577 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
TRAPPC12-213ENST00000461577 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
TRAPPC12-213ENST00000461577 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
TRAPPC12-213ENST00000461577 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-213ENST00000461577 IL16Q14005 1332 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 AFDNP55196 1824 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 KIF13BQ9NQT8 1826 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 SERPINB2P05120 415 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 GPR162Q16538 588 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 WDR63Q8IWG1 891 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
TRAPPC12-213ENST00000461577 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 ELL2O00472 640 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 RGL2O15211 777 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 NPHP1O15259 732 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 ANXA1P04083 346 aa13.7□□□□□ -0.22
TRAPPC12-213ENST00000461577 TGFB2P61812 414 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms