RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 CANXP27824 592 aaKnown RBP20.91■□□□□ 0.94
GGA1-216ENST00000460957 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
GGA1-216ENST00000460957 ZPR1O75312 459 aa20.9■□□□□ 0.94
GGA1-216ENST00000460957 TMPOP42166 694 aaKnown RBP20.9■□□□□ 0.94
GGA1-216ENST00000460957 INTS5Q6P9B9 1019 aaKnown RBP20.9■□□□□ 0.94
GGA1-216ENST00000460957 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
GGA1-216ENST00000460957 KCNQ3O43525 872 aa20.89■□□□□ 0.93
GGA1-216ENST00000460957 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.93
GGA1-216ENST00000460957 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
GGA1-216ENST00000460957 C4AP0C0L4 1744 aa20.88■□□□□ 0.93
GGA1-216ENST00000460957 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
GGA1-216ENST00000460957 ZBTB1Q9Y2K1 713 aa20.88■□□□□ 0.93
GGA1-216ENST00000460957 SNRPA1P09661 255 aaKnown RBP20.87■□□□□ 0.93
GGA1-216ENST00000460957 COL15A1P39059 1388 aa20.86■□□□□ 0.93
GGA1-216ENST00000460957 SOS1Q07889 1333 aaPredicted RBP20.86■□□□□ 0.93
GGA1-216ENST00000460957 MMP10P09238 476 aa20.86■□□□□ 0.93
GGA1-216ENST00000460957 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
GGA1-216ENST00000460957 MRS2Q9HD23 443 aa20.86■□□□□ 0.93
GGA1-216ENST00000460957 PARP3Q9Y6F1 533 aa20.86■□□□□ 0.93
GGA1-216ENST00000460957 A0A087WZG4 1122 aa20.85■□□□□ 0.93
GGA1-216ENST00000460957 SRP68Q9UHB9 627 aaKnown RBP20.85■□□□□ 0.93
GGA1-216ENST00000460957 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
GGA1-216ENST00000460957 USP42Q9H9J4 1324 aaKnown RBP20.84■□□□□ 0.93
GGA1-216ENST00000460957 GYS1P13807 737 aa20.84■□□□□ 0.93
GGA1-216ENST00000460957 USPL1Q5W0Q7 1092 aa20.83■□□□□ 0.93
GGA1-216ENST00000460957 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.93
GGA1-216ENST00000460957 A1BGP04217 495 aa20.82■□□□□ 0.92
GGA1-216ENST00000460957 GPR162Q16538 588 aa20.82■□□□□ 0.92
GGA1-216ENST00000460957 CD2APQ9Y5K6 639 aa20.82■□□□□ 0.92
GGA1-216ENST00000460957 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
GGA1-216ENST00000460957 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
GGA1-216ENST00000460957 NARFQ9UHQ1 456 aa20.81■□□□□ 0.92
GGA1-216ENST00000460957 IL6STP40189 918 aaPredicted RBP20.8■□□□□ 0.92
GGA1-216ENST00000460957 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
GGA1-216ENST00000460957 PRAMEF22A3QJZ6 481 aa20.79■□□□□ 0.92
GGA1-216ENST00000460957 APAF1O14727 1248 aa20.79■□□□□ 0.92
GGA1-216ENST00000460957 EIF5P55010 431 aaKnown RBP20.79■□□□□ 0.92
GGA1-216ENST00000460957 FKBP8Q14318 412 aa20.79■□□□□ 0.92
GGA1-216ENST00000460957 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
GGA1-216ENST00000460957 EIF4A1P60842 406 aaKnown RBP20.78■□□□□ 0.92
GGA1-216ENST00000460957 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.92
GGA1-216ENST00000460957 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.92
GGA1-216ENST00000460957 BABAM1Q9NWV8 329 aa20.77■□□□□ 0.92
GGA1-216ENST00000460957 TBC1D2BQ9UPU7 963 aa20.77■□□□□ 0.92
GGA1-216ENST00000460957 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
GGA1-216ENST00000460957 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
GGA1-216ENST00000460957 BICDL1Q6ZP65 573 aa20.75■□□□□ 0.91
GGA1-216ENST00000460957 DZIP3Q86Y13 1208 aaKnown RBP20.75■□□□□ 0.91
GGA1-216ENST00000460957 TRIM35Q9UPQ4 493 aa20.75■□□□□ 0.91
GGA1-216ENST00000460957 NPHP1O15259 732 aa20.74■□□□□ 0.91
GGA1-216ENST00000460957 NGEFQ8N5V2 710 aa20.73■□□□□ 0.91
GGA1-216ENST00000460957 EIF2S2P20042 333 aaKnown RBP20.72■□□□□ 0.91
GGA1-216ENST00000460957 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
GGA1-216ENST00000460957 NFIXQ14938 502 aa20.71■□□□□ 0.91
GGA1-216ENST00000460957 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
GGA1-216ENST00000460957 WWC3Q9ULE0 1092 aa20.71■□□□□ 0.91
GGA1-216ENST00000460957 SCN7AQ01118 1682 aa20.7■□□□□ 0.91
GGA1-216ENST00000460957 POLRMTO00411 1230 aaKnown RBP20.7■□□□□ 0.9
GGA1-216ENST00000460957 MYL6BP14649 208 aa20.7■□□□□ 0.9
GGA1-216ENST00000460957 TM4SF1P30408 202 aa20.7■□□□□ 0.9
GGA1-216ENST00000460957 TGFB2P61812 414 aa20.7■□□□□ 0.9
GGA1-216ENST00000460957 DDR1Q08345 913 aa20.7■□□□□ 0.9
GGA1-216ENST00000460957 CHL1O00533 1208 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 GRIN3BO60391 1043 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 SERPINB2P05120 415 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 YY1P25490 414 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 CFAP44Q96MT7 982 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 SETDB2Q96T68 719 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
GGA1-216ENST00000460957 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
GGA1-216ENST00000460957 NBPF26B4DH59 902 aa20.68■□□□□ 0.9
GGA1-216ENST00000460957 GNAI1P63096 354 aa20.68■□□□□ 0.9
GGA1-216ENST00000460957 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
GGA1-216ENST00000460957 NBPF10Q6P3W6 841 aaKnown RBP20.68■□□□□ 0.9
GGA1-216ENST00000460957 NBPF15Q8N660 670 aa20.68■□□□□ 0.9
GGA1-216ENST00000460957 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
GGA1-216ENST00000460957 CAMTA2O94983 1202 aa20.67■□□□□ 0.9
GGA1-216ENST00000460957 NECTIN2Q92692 538 aa20.67■□□□□ 0.9
GGA1-216ENST00000460957 BCORQ6W2J9 1755 aa20.67■□□□□ 0.9
GGA1-216ENST00000460957 N4BP2Q86UW6 1770 aaPredicted RBP20.67■□□□□ 0.9
GGA1-216ENST00000460957 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
GGA1-216ENST00000460957 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
GGA1-216ENST00000460957 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
GGA1-216ENST00000460957 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
GGA1-216ENST00000460957 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
GGA1-216ENST00000460957 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
GGA1-216ENST00000460957 DPEP1P16444 411 aa20.64■□□□□ 0.89
GGA1-216ENST00000460957 YBX3P16989 372 aaKnown RBP eCLIP20.64■□□□□ 0.89
GGA1-216ENST00000460957 MBIPQ9NS73 344 aa20.64■□□□□ 0.89
GGA1-216ENST00000460957 SALL2Q9Y467 1007 aaPredicted RBP20.64■□□□□ 0.89
GGA1-216ENST00000460957 CHD4Q14839 1912 aa20.64■□□□□ 0.89
GGA1-216ENST00000460957 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
GGA1-216ENST00000460957 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
GGA1-216ENST00000460957 ST5P78524 1137 aa20.62■□□□□ 0.89
GGA1-216ENST00000460957 KRT24Q2M2I5 525 aa20.62■□□□□ 0.89
GGA1-216ENST00000460957 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
GGA1-216ENST00000460957 CNBD1Q8NA66 436 aa20.62■□□□□ 0.89
GGA1-216ENST00000460957 NIP7Q9Y221 180 aaKnown RBP eCLIP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms