RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 CYP19A1P11511 503 aaPredicted RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 CANXP27824 592 aaKnown RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 CRKLP46109 303 aaKnown RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 EIF4A1P60842 406 aaKnown RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 INTS5Q6P9B9 1019 aaKnown RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 COL23A1Q86Y22 540 aaPredicted RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 ATF5Q9Y2D1 282 aaPredicted RBP7.68□□□□□ -1.18
NXF3-203ENST00000460791 HEG1Q9ULI3 1381 aa7.68□□□□□ -1.18
NXF3-203ENST00000460791 CHL1O00533 1208 aa7.67□□□□□ -1.18
NXF3-203ENST00000460791 EIF2S2P20042 333 aaKnown RBP7.67□□□□□ -1.18
NXF3-203ENST00000460791 MSL1Q68DK7 614 aa7.67□□□□□ -1.18
NXF3-203ENST00000460791 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
NXF3-203ENST00000460791 TSR2Q969E8 191 aaKnown RBP7.67□□□□□ -1.18
NXF3-203ENST00000460791 ARXQ96QS3 562 aa7.67□□□□□ -1.18
NXF3-203ENST00000460791 MBIPQ9NS73 344 aa7.67□□□□□ -1.18
NXF3-203ENST00000460791 ZNF330Q9Y3S2 320 aaPredicted RBP7.67□□□□□ -1.18
NXF3-203ENST00000460791 ZNF831Q5JPB2 1677 aa7.67□□□□□ -1.18
NXF3-203ENST00000460791 QSER1Q2KHR3 1735 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.66□□□□□ -1.18
NXF3-203ENST00000460791 STARD3NLO95772 234 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 SNRPA1P09661 255 aaKnown RBP7.66□□□□□ -1.18
NXF3-203ENST00000460791 GNAI1P63096 354 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 RC3H1Q5TC82 1133 aaKnown RBP7.66□□□□□ -1.18
NXF3-203ENST00000460791 SAMD1Q6SPF0 538 aaPredicted RBP7.66□□□□□ -1.18
NXF3-203ENST00000460791 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 SPINK5Q9NQ38 1064 aaPredicted RBP7.66□□□□□ -1.18
NXF3-203ENST00000460791 CCDC87Q9NVE4 849 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 SRP68Q9UHB9 627 aaKnown RBP7.66□□□□□ -1.18
NXF3-203ENST00000460791 ZBTB1Q9Y2K1 713 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 PNPLA7Q6ZV29 1317 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 CASZ1Q86V15 1759 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 CACNA1FO60840 1977 aa7.66□□□□□ -1.18
NXF3-203ENST00000460791 TCERG1O14776 1098 aaKnown RBP7.65□□□□□ -1.18
NXF3-203ENST00000460791 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
NXF3-203ENST00000460791 RPS6KA4O75676 772 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 ANXA1P04083 346 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 ZNF853P0CG23 659 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 HNRNPUQ00839 825 aaKnown RBP eCLIP7.65□□□□□ -1.18
NXF3-203ENST00000460791 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.18
NXF3-203ENST00000460791 CFAP44Q96MT7 982 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 IFT57Q9NWB7 429 aa7.65□□□□□ -1.18
NXF3-203ENST00000460791 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
NXF3-203ENST00000460791 NUP98P52948 1817 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 CNTNAP4Q9C0A0 1308 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 NBPF26B4DH59 902 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 MYL6BP14649 208 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 RFC4P35249 363 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 CALD1Q05682 793 aaKnown RBP7.64□□□□□ -1.19
NXF3-203ENST00000460791 TRAPPC3LQ5T215 181 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 DUSP27Q5VZP5 1158 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
NXF3-203ENST00000460791 WDR63Q8IWG1 891 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 TSPYL6Q8N831 410 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 CDCA7LQ96GN5 454 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 TEX13AQ9BXU3 409 aaPredicted RBP7.64□□□□□ -1.19
NXF3-203ENST00000460791 BABAM1Q9NWV8 329 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 TBC1D2BQ9UPU7 963 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 LAMB4A4D0S4 1761 aa7.64□□□□□ -1.19
NXF3-203ENST00000460791 SOS1Q07889 1333 aaPredicted RBP7.63□□□□□ -1.19
NXF3-203ENST00000460791 EXOSC9Q06265 439 aaKnown RBP7.63□□□□□ -1.19
NXF3-203ENST00000460791 PROSER3Q2NL68 480 aa7.63□□□□□ -1.19
NXF3-203ENST00000460791 SRCAPQ6ZRS2 3230 aa7.63□□□□□ -1.19
NXF3-203ENST00000460791 SSFA2P28290 1259 aa7.62□□□□□ -1.19
NXF3-203ENST00000460791 EIF5P55010 431 aaKnown RBP7.62□□□□□ -1.19
NXF3-203ENST00000460791 USPL1Q5W0Q7 1092 aa7.62□□□□□ -1.19
NXF3-203ENST00000460791 FLAD1Q8NFF5 587 aa7.62□□□□□ -1.19
NXF3-203ENST00000460791 YTHDC1Q96MU7 727 aaKnown RBP7.62□□□□□ -1.19
NXF3-203ENST00000460791 SPON1Q9HCB6 807 aa7.62□□□□□ -1.19
NXF3-203ENST00000460791 CICQ96RK0 1608 aaPredicted RBP7.62□□□□□ -1.19
NXF3-203ENST00000460791 AFDNP55196 1824 aaKnown RBP7.62□□□□□ -1.19
NXF3-203ENST00000460791 IL16Q14005 1332 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 ZNF521Q96K83 1311 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 FANCIQ9NVI1 1328 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 ZPR1O75312 459 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 HMGB2P26583 209 aaKnown RBP7.61□□□□□ -1.19
NXF3-203ENST00000460791 GOLGA2Q08379 1002 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 AIMP1Q12904 312 aaKnown RBP7.61□□□□□ -1.19
NXF3-203ENST00000460791 FKBP8Q14318 412 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 PDIA6Q15084 440 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 HDGFL1Q5TGJ6 251 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 BICDL1Q6ZP65 573 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 TTLL7Q6ZT98 887 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 NPM2Q86SE8 214 aaKnown RBP7.61□□□□□ -1.19
NXF3-203ENST00000460791 KLHL34Q8N239 644 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 MTFR1LQ9H019 292 aa7.61□□□□□ -1.19
NXF3-203ENST00000460791 COL15A1P39059 1388 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 A0A087WZG4 1122 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 GYS1P13807 737 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 IL6STP40189 918 aaPredicted RBP7.6□□□□□ -1.19
NXF3-203ENST00000460791 PTGER2P43116 358 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 SLFN5Q08AF3 891 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
NXF3-203ENST00000460791 DZIP3Q86Y13 1208 aaKnown RBP7.6□□□□□ -1.19
NXF3-203ENST00000460791 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 ZNF428Q96B54 188 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 MYH16Q9H6N6 1097 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms