RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
CKAP2-204ENST00000459902 PHKA2P46019 1235 aa11.69□□□□□ -0.54
CKAP2-204ENST00000459902 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
CKAP2-204ENST00000459902 TEAD4Q15561 434 aa11.69□□□□□ -0.54
CKAP2-204ENST00000459902 PHLDB3Q6NSJ2 640 aa11.69□□□□□ -0.54
CKAP2-204ENST00000459902 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
CKAP2-204ENST00000459902 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
CKAP2-204ENST00000459902 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
CKAP2-204ENST00000459902 WDR44Q5JSH3 913 aa11.68□□□□□ -0.54
CKAP2-204ENST00000459902 C11orf95C9JLR9 678 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-204ENST00000459902 NOS2P35228 1153 aa11.67□□□□□ -0.54
CKAP2-204ENST00000459902 FKBP5Q13451 457 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-204ENST00000459902 SH3PXD2AQ5TCZ1 1133 aa11.67□□□□□ -0.54
CKAP2-204ENST00000459902 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
CKAP2-204ENST00000459902 L3MBTL2Q969R5 705 aa11.67□□□□□ -0.54
CKAP2-204ENST00000459902 C2orf49Q9BVC5 232 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-204ENST00000459902 SERTM1A2A2V5 107 aa11.66□□□□□ -0.54
CKAP2-204ENST00000459902 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
CKAP2-204ENST00000459902 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
CKAP2-204ENST00000459902 EML1O00423 815 aa11.65□□□□□ -0.54
CKAP2-204ENST00000459902 FOXO3O43524 673 aa11.65□□□□□ -0.54
CKAP2-204ENST00000459902 ZNF232Q9UNY5 417 aa11.65□□□□□ -0.54
CKAP2-204ENST00000459902 SCNN1AP37088 669 aa11.64□□□□□ -0.55
CKAP2-204ENST00000459902 C1orf216Q8TAB5 229 aa11.64□□□□□ -0.55
CKAP2-204ENST00000459902 TIMMDC1Q9NPL8 285 aa11.64□□□□□ -0.55
CKAP2-204ENST00000459902 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
CKAP2-204ENST00000459902 CAPN12Q6ZSI9 719 aa11.63□□□□□ -0.55
CKAP2-204ENST00000459902 HCN4Q9Y3Q4 1203 aa11.63□□□□□ -0.55
CKAP2-204ENST00000459902 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
CKAP2-204ENST00000459902 BRD1O95696 1058 aa11.62□□□□□ -0.55
CKAP2-204ENST00000459902 PTSQ03393 145 aa11.62□□□□□ -0.55
CKAP2-204ENST00000459902 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
CKAP2-204ENST00000459902 AIDAQ96BJ3 306 aa11.62□□□□□ -0.55
CKAP2-204ENST00000459902 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
CKAP2-204ENST00000459902 TXLNAP40222 546 aa11.61□□□□□ -0.55
CKAP2-204ENST00000459902 HIRAP54198 1017 aaPredicted RBP11.61□□□□□ -0.55
CKAP2-204ENST00000459902 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
CKAP2-204ENST00000459902 SLC35F4A4IF30 521 aa11.59□□□□□ -0.55
CKAP2-204ENST00000459902 COL26A1Q96A83 441 aa11.59□□□□□ -0.55
CKAP2-204ENST00000459902 DYRK1BQ9Y463 629 aa11.59□□□□□ -0.55
CKAP2-204ENST00000459902 A0A1B0GTH6 734 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 MSX1P28360 303 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 ALDH16A1Q8IZ83 802 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 PHACTR1Q9C0D0 580 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 SEPT3Q9UH03 358 aa11.58□□□□□ -0.56
CKAP2-204ENST00000459902 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
CKAP2-204ENST00000459902 C7orf43Q8WVR3 580 aa11.57□□□□□ -0.56
CKAP2-204ENST00000459902 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
CKAP2-204ENST00000459902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.56
CKAP2-204ENST00000459902 ZDHHC3Q9NYG2 299 aa11.57□□□□□ -0.56
CKAP2-204ENST00000459902 PTCD1O75127 700 aaKnown RBP11.56□□□□□ -0.56
CKAP2-204ENST00000459902 ATP4AP20648 1035 aa11.56□□□□□ -0.56
CKAP2-204ENST00000459902 NAA30Q147X3 362 aaPredicted RBP11.56□□□□□ -0.56
CKAP2-204ENST00000459902 C1orf53Q5VUE5 145 aa11.56□□□□□ -0.56
CKAP2-204ENST00000459902 CCDC155Q8N6L0 562 aa11.56□□□□□ -0.56
CKAP2-204ENST00000459902 F11P03951 625 aa11.55□□□□□ -0.56
CKAP2-204ENST00000459902 ARID4AP29374 1257 aaPredicted RBP11.55□□□□□ -0.56
CKAP2-204ENST00000459902 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
CKAP2-204ENST00000459902 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
CKAP2-204ENST00000459902 GPAMQ9HCL2 828 aa11.55□□□□□ -0.56
CKAP2-204ENST00000459902 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
CKAP2-204ENST00000459902 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
CKAP2-204ENST00000459902 SAP130Q9H0E3 1048 aa11.54□□□□□ -0.56
CKAP2-204ENST00000459902 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
CKAP2-204ENST00000459902 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
CKAP2-204ENST00000459902 KCNA1Q09470 495 aa11.52□□□□□ -0.57
CKAP2-204ENST00000459902 COX20Q5RI15 118 aa11.52□□□□□ -0.57
CKAP2-204ENST00000459902 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.57
CKAP2-204ENST00000459902 ZIC5Q96T25 663 aa11.52□□□□□ -0.57
CKAP2-204ENST00000459902 RUBCNLQ9H714 662 aa11.52□□□□□ -0.57
CKAP2-204ENST00000459902 LRFN2Q9ULH4 789 aa11.52□□□□□ -0.57
CKAP2-204ENST00000459902 RTN1Q16799 776 aa11.51□□□□□ -0.57
CKAP2-204ENST00000459902 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
CKAP2-204ENST00000459902 C16orf46Q6P387 395 aa11.51□□□□□ -0.57
CKAP2-204ENST00000459902 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
CKAP2-204ENST00000459902 RIPOR1Q6ZS17 1223 aa11.51□□□□□ -0.57
CKAP2-204ENST00000459902 MYO19Q96H55 970 aa11.51□□□□□ -0.57
CKAP2-204ENST00000459902 CUEDC1Q9NWM3 386 aaPredicted RBP11.51□□□□□ -0.57
CKAP2-204ENST00000459902 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
CKAP2-204ENST00000459902 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
CKAP2-204ENST00000459902 CRISPLD1Q9H336 500 aa11.5□□□□□ -0.57
CKAP2-204ENST00000459902 MTMR7Q9Y216 660 aa11.5□□□□□ -0.57
CKAP2-204ENST00000459902 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
CKAP2-204ENST00000459902 ITGA6P23229 1130 aa11.49□□□□□ -0.57
CKAP2-204ENST00000459902 SERPINB4P48594 390 aa11.49□□□□□ -0.57
CKAP2-204ENST00000459902 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
CKAP2-204ENST00000459902 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
CKAP2-204ENST00000459902 GNEQ9Y223 722 aaKnown RBP11.49□□□□□ -0.57
CKAP2-204ENST00000459902 THBS1P07996 1170 aa11.48□□□□□ -0.57
CKAP2-204ENST00000459902 DGKZQ13574 1117 aa11.48□□□□□ -0.57
CKAP2-204ENST00000459902 DBN1Q16643 649 aa11.48□□□□□ -0.57
CKAP2-204ENST00000459902 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
CKAP2-204ENST00000459902 GPC6Q9Y625 555 aaPredicted RBP11.48□□□□□ -0.57
CKAP2-204ENST00000459902 DNMT3AQ9Y6K1 912 aaPredicted RBP11.48□□□□□ -0.57
CKAP2-204ENST00000459902 IVNS1ABPQ9Y6Y0 642 aa11.47□□□□□ -0.57
CKAP2-204ENST00000459902 TNFRSF10BO14763 440 aa11.46□□□□□ -0.57
CKAP2-204ENST00000459902 ABL1P00519 1130 aa11.46□□□□□ -0.57
CKAP2-204ENST00000459902 C11orf91Q3C1V1 193 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms