RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
PCCB-202ENST00000459873 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
PCCB-202ENST00000459873 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
PCCB-202ENST00000459873 ARFGEF2Q9Y6D5 1785 aa11.95□□□□□ -0.5
PCCB-202ENST00000459873 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 GNPATO15228 680 aa11.94□□□□□ -0.5
PCCB-202ENST00000459873 GIGYF1O75420 1035 aaPredicted RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 TSR2Q969E8 191 aaKnown RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 CCDC87Q9NVE4 849 aa11.94□□□□□ -0.5
PCCB-202ENST00000459873 ZBTB1Q9Y2K1 713 aa11.94□□□□□ -0.5
PCCB-202ENST00000459873 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
PCCB-202ENST00000459873 HOXB7P09629 217 aa11.93□□□□□ -0.5
PCCB-202ENST00000459873 SSFA2P28290 1259 aa11.93□□□□□ -0.5
PCCB-202ENST00000459873 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
PCCB-202ENST00000459873 INTS5Q6P9B9 1019 aaKnown RBP11.93□□□□□ -0.5
PCCB-202ENST00000459873 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
PCCB-202ENST00000459873 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
PCCB-202ENST00000459873 UTRNP46939 3433 aa11.93□□□□□ -0.5
PCCB-202ENST00000459873 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
PCCB-202ENST00000459873 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
PCCB-202ENST00000459873 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
PCCB-202ENST00000459873 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
PCCB-202ENST00000459873 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
PCCB-202ENST00000459873 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
PCCB-202ENST00000459873 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
PCCB-202ENST00000459873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
PCCB-202ENST00000459873 STARD3NLO95772 234 aa11.91□□□□□ -0.5
PCCB-202ENST00000459873 ADRA2BP18089 450 aa11.91□□□□□ -0.5
PCCB-202ENST00000459873 HNRNPUQ00839 825 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCCB-202ENST00000459873 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
PCCB-202ENST00000459873 RPS6KA4O75676 772 aa11.9□□□□□ -0.5
PCCB-202ENST00000459873 PHF14O94880 888 aa11.9□□□□□ -0.5
PCCB-202ENST00000459873 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
PCCB-202ENST00000459873 USP16Q9Y5T5 823 aa11.9□□□□□ -0.5
PCCB-202ENST00000459873 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
PCCB-202ENST00000459873 USP42Q9H9J4 1324 aaKnown RBP11.89□□□□□ -0.51
PCCB-202ENST00000459873 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 NUP98P52948 1817 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
PCCB-202ENST00000459873 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 IL6STP40189 918 aaPredicted RBP11.89□□□□□ -0.51
PCCB-202ENST00000459873 EIF5P55010 431 aaKnown RBP11.89□□□□□ -0.51
PCCB-202ENST00000459873 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
PCCB-202ENST00000459873 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
PCCB-202ENST00000459873 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 MYH16Q9H6N6 1097 aa11.89□□□□□ -0.51
PCCB-202ENST00000459873 E9PSI1 815 aa11.88□□□□□ -0.51
PCCB-202ENST00000459873 A1BGP04217 495 aa11.88□□□□□ -0.51
PCCB-202ENST00000459873 PIP4K2AP48426 406 aaPredicted RBP11.88□□□□□ -0.51
PCCB-202ENST00000459873 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
PCCB-202ENST00000459873 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
PCCB-202ENST00000459873 LRP10Q7Z4F1 713 aa11.88□□□□□ -0.51
PCCB-202ENST00000459873 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
PCCB-202ENST00000459873 LAMB2P55268 1798 aa11.87□□□□□ -0.51
PCCB-202ENST00000459873 CANXP27824 592 aaKnown RBP11.87□□□□□ -0.51
PCCB-202ENST00000459873 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
PCCB-202ENST00000459873 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 PDIA6Q15084 440 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
PCCB-202ENST00000459873 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
PCCB-202ENST00000459873 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 MTFR1LQ9H019 292 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 DLEC1Q9Y238 1755 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
PCCB-202ENST00000459873 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
PCCB-202ENST00000459873 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
PCCB-202ENST00000459873 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
PCCB-202ENST00000459873 TWISTNBQ3B726 338 aaPredicted RBP11.85□□□□□ -0.51
PCCB-202ENST00000459873 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
PCCB-202ENST00000459873 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
PCCB-202ENST00000459873 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
PCCB-202ENST00000459873 SRP68Q9UHB9 627 aaKnown RBP11.85□□□□□ -0.51
PCCB-202ENST00000459873 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
PCCB-202ENST00000459873 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
PCCB-202ENST00000459873 GYS1P13807 737 aa11.84□□□□□ -0.51
PCCB-202ENST00000459873 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
PCCB-202ENST00000459873 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCCB-202ENST00000459873 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
PCCB-202ENST00000459873 C10orf71Q711Q0 1435 aa11.84□□□□□ -0.51
PCCB-202ENST00000459873 A0A087WZG4 1122 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 ELL2O00472 640 aaPredicted RBP11.83□□□□□ -0.52
PCCB-202ENST00000459873 CAMTA2O94983 1202 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 ANXA1P04083 346 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 MYL6BP14649 208 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
PCCB-202ENST00000459873 RFC4P35249 363 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 PTGER2P43116 358 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
PCCB-202ENST00000459873 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
PCCB-202ENST00000459873 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms