RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 SLIT3O75094 1523 aa11.67□□□□□ -0.54
LINC01888-202ENST00000457602 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
LINC01888-202ENST00000457602 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
LINC01888-202ENST00000457602 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
LINC01888-202ENST00000457602 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
LINC01888-202ENST00000457602 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
LINC01888-202ENST00000457602 FECHP22830 423 aa11.66□□□□□ -0.54
LINC01888-202ENST00000457602 DDB1Q16531 1140 aa11.66□□□□□ -0.54
LINC01888-202ENST00000457602 CARD11Q9BXL7 1154 aa11.66□□□□□ -0.54
LINC01888-202ENST00000457602 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
LINC01888-202ENST00000457602 HPS5Q9UPZ3 1129 aa11.66□□□□□ -0.54
LINC01888-202ENST00000457602 KTN1Q86UP2 1357 aaKnown RBP11.66□□□□□ -0.54
LINC01888-202ENST00000457602 PIK3C2AO00443 1686 aa11.65□□□□□ -0.54
LINC01888-202ENST00000457602 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
LINC01888-202ENST00000457602 GNPATO15228 680 aa11.65□□□□□ -0.54
LINC01888-202ENST00000457602 FAM161AQ3B820 660 aa11.65□□□□□ -0.54
LINC01888-202ENST00000457602 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
LINC01888-202ENST00000457602 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
LINC01888-202ENST00000457602 WDR17Q8IZU2 1322 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 OVOS2A0A0G2JMS6 1433 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 OVOS2A0A0J9YW53 1432 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
LINC01888-202ENST00000457602 OVOS2Q6IE36 1432 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
LINC01888-202ENST00000457602 NYAP1Q6ZVC0 841 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 ARHGEF25Q86VW2 580 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
LINC01888-202ENST00000457602 PARP4Q9UKK3 1724 aaKnown RBP11.63□□□□□ -0.55
LINC01888-202ENST00000457602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC01888-202ENST00000457602 AKAP12Q02952 1782 aa11.62□□□□□ -0.55
LINC01888-202ENST00000457602 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
LINC01888-202ENST00000457602 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
LINC01888-202ENST00000457602 CDCA7Q9BWT1 371 aaPredicted RBP11.62□□□□□ -0.55
LINC01888-202ENST00000457602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC01888-202ENST00000457602 HDGFL2Q7Z4V5 671 aaPredicted RBP11.61□□□□□ -0.55
LINC01888-202ENST00000457602 SBNO2Q9Y2G9 1366 aa11.61□□□□□ -0.55
LINC01888-202ENST00000457602 COL18A1P39060 1754 aa11.61□□□□□ -0.55
LINC01888-202ENST00000457602 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
LINC01888-202ENST00000457602 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
LINC01888-202ENST00000457602 NME9Q86XW9 330 aa11.6□□□□□ -0.55
LINC01888-202ENST00000457602 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
LINC01888-202ENST00000457602 CARD10Q9BWT7 1032 aa11.6□□□□□ -0.55
LINC01888-202ENST00000457602 NUP188Q5SRE5 1749 aa11.6□□□□□ -0.55
LINC01888-202ENST00000457602 RREB1Q92766 1687 aa11.59□□□□□ -0.55
LINC01888-202ENST00000457602 EXOC5O00471 708 aa11.59□□□□□ -0.55
LINC01888-202ENST00000457602 DNAJB2P25686 324 aa11.59□□□□□ -0.55
LINC01888-202ENST00000457602 MARCH10Q8NA82 808 aaPredicted RBP11.59□□□□□ -0.55
LINC01888-202ENST00000457602 SLC12A5Q9H2X9 1139 aa11.59□□□□□ -0.55
LINC01888-202ENST00000457602 TMEM134Q9H6X4 195 aa11.59□□□□□ -0.55
LINC01888-202ENST00000457602 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
LINC01888-202ENST00000457602 RCCD1A6NED2 376 aa11.58□□□□□ -0.56
LINC01888-202ENST00000457602 PLSCR1O15162 318 aa11.58□□□□□ -0.56
LINC01888-202ENST00000457602 METTL3Q86U44 580 aaKnown RBP11.58□□□□□ -0.56
LINC01888-202ENST00000457602 TERF2IPQ9NYB0 399 aa11.58□□□□□ -0.56
LINC01888-202ENST00000457602 NFAT5O94916 1531 aa11.58□□□□□ -0.56
LINC01888-202ENST00000457602 RGPD5Q99666 1765 aa11.58□□□□□ -0.56
LINC01888-202ENST00000457602 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 USP31Q70CQ4 1352 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
LINC01888-202ENST00000457602 OATP04181 439 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 PPP4CP60510 307 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 IFFO2Q5TF58 517 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
LINC01888-202ENST00000457602 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
LINC01888-202ENST00000457602 SPON1Q9HCB6 807 aa11.56□□□□□ -0.56
LINC01888-202ENST00000457602 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
LINC01888-202ENST00000457602 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
LINC01888-202ENST00000457602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
LINC01888-202ENST00000457602 KCNQ2O43526 872 aa11.55□□□□□ -0.56
LINC01888-202ENST00000457602 SLF2Q8IX21 1173 aa11.55□□□□□ -0.56
LINC01888-202ENST00000457602 ANKRD24Q8TF21 1146 aa11.55□□□□□ -0.56
LINC01888-202ENST00000457602 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
LINC01888-202ENST00000457602 ABCC6O95255 1503 aa11.55□□□□□ -0.56
LINC01888-202ENST00000457602 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
LINC01888-202ENST00000457602 BCL9O00512 1426 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 TNS2Q63HR2 1409 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 ST20-MTHFSA0A0A6YYL1 179 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 RNF40O75150 1001 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 IL2RBP14784 551 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 TXNRD1Q16881 649 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 LTV1Q96GA3 475 aaPredicted RBP11.53□□□□□ -0.56
LINC01888-202ENST00000457602 ACSBG1Q96GR2 724 aa11.53□□□□□ -0.56
LINC01888-202ENST00000457602 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
LINC01888-202ENST00000457602 RGPD3A6NKT7 1758 aaPredicted RBP11.52□□□□□ -0.57
LINC01888-202ENST00000457602 RGPD4Q7Z3J3 1758 aa11.52□□□□□ -0.57
LINC01888-202ENST00000457602 APLP1P51693 650 aa11.52□□□□□ -0.57
LINC01888-202ENST00000457602 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
LINC01888-202ENST00000457602 STK32BQ9NY57 414 aa11.52□□□□□ -0.57
LINC01888-202ENST00000457602 LTN1O94822 1766 aa11.51□□□□□ -0.57
LINC01888-202ENST00000457602 MAP2K5Q13163 448 aa11.51□□□□□ -0.57
LINC01888-202ENST00000457602 COG3Q96JB2 828 aa11.51□□□□□ -0.57
LINC01888-202ENST00000457602 TESK2Q96S53 571 aa11.51□□□□□ -0.57
LINC01888-202ENST00000457602 USP54Q70EL1 1684 aa11.51□□□□□ -0.57
LINC01888-202ENST00000457602 NINLQ9Y2I6 1382 aa11.51□□□□□ -0.57
LINC01888-202ENST00000457602 ZBTB7AO95365 584 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms