RNA–Protein interactions for RNA: ENST00000457215.5

ITM2C-206, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-206ENST00000457215 RFC4P35249 363 aa21.59■■□□□ 1.05
ITM2C-206ENST00000457215 WDR43Q15061 677 aaKnown RBP eCLIP21.59■■□□□ 1.05
ITM2C-206ENST00000457215 NLGN2Q8NFZ4 835 aa21.59■■□□□ 1.05
ITM2C-206ENST00000457215 RUNDC1Q96C34 613 aa21.59■■□□□ 1.05
ITM2C-206ENST00000457215 RRP7AQ9Y3A4 280 aaKnown RBP21.59■■□□□ 1.05
ITM2C-206ENST00000457215 KDM3BQ7LBC6 1761 aa21.59■■□□□ 1.05
ITM2C-206ENST00000457215 USP42Q9H9J4 1324 aaKnown RBP21.58■■□□□ 1.05
ITM2C-206ENST00000457215 USP16Q9Y5T5 823 aa21.58■■□□□ 1.05
ITM2C-206ENST00000457215 TEX13AQ9BXU3 409 aaPredicted RBP21.57■■□□□ 1.04
ITM2C-206ENST00000457215 STARD3NLO95772 234 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 A1BGP04217 495 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 MMP10P09238 476 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
ITM2C-206ENST00000457215 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
ITM2C-206ENST00000457215 KLHL34Q8N239 644 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 TRIM35Q9UPQ4 493 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 COL15A1P39059 1388 aa21.56■■□□□ 1.04
ITM2C-206ENST00000457215 FKBP8Q14318 412 aa21.55■■□□□ 1.04
ITM2C-206ENST00000457215 BCL2L12Q9HB09 334 aa21.55■■□□□ 1.04
ITM2C-206ENST00000457215 SNRPA1P09661 255 aaKnown RBP21.53■■□□□ 1.04
ITM2C-206ENST00000457215 EIF4A1P60842 406 aaKnown RBP21.53■■□□□ 1.04
ITM2C-206ENST00000457215 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
ITM2C-206ENST00000457215 USPL1Q5W0Q7 1092 aa21.53■■□□□ 1.04
ITM2C-206ENST00000457215 NARFQ9UHQ1 456 aa21.53■■□□□ 1.04
ITM2C-206ENST00000457215 CD2APQ9Y5K6 639 aa21.53■■□□□ 1.04
ITM2C-206ENST00000457215 UTRNP46939 3433 aa21.52■■□□□ 1.04
ITM2C-206ENST00000457215 PNISRQ8TF01 805 aaKnown RBP21.52■■□□□ 1.04
ITM2C-206ENST00000457215 TM4SF1P30408 202 aa21.51■■□□□ 1.03
ITM2C-206ENST00000457215 PIP4K2AP48426 406 aaPredicted RBP21.51■■□□□ 1.03
ITM2C-206ENST00000457215 DDR1Q08345 913 aa21.51■■□□□ 1.03
ITM2C-206ENST00000457215 ANP32CO43423 234 aa21.5■■□□□ 1.03
ITM2C-206ENST00000457215 IL6STP40189 918 aaPredicted RBP21.5■■□□□ 1.03
ITM2C-206ENST00000457215 KIF13BQ9NQT8 1826 aa21.5■■□□□ 1.03
ITM2C-206ENST00000457215 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
ITM2C-206ENST00000457215 ZPR1O75312 459 aa21.49■■□□□ 1.03
ITM2C-206ENST00000457215 GIGYF1O75420 1035 aaPredicted RBP21.49■■□□□ 1.03
ITM2C-206ENST00000457215 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
ITM2C-206ENST00000457215 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
ITM2C-206ENST00000457215 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
ITM2C-206ENST00000457215 GOLGB1Q14789 3259 aaKnown RBP21.49■■□□□ 1.03
ITM2C-206ENST00000457215 APAF1O14727 1248 aa21.48■■□□□ 1.03
ITM2C-206ENST00000457215 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
ITM2C-206ENST00000457215 LAMB4A4D0S4 1761 aa21.47■■□□□ 1.03
ITM2C-206ENST00000457215 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
ITM2C-206ENST00000457215 TBC1D2BQ9UPU7 963 aa21.47■■□□□ 1.03
ITM2C-206ENST00000457215 C10orf71Q711Q0 1435 aa21.46■■□□□ 1.03
ITM2C-206ENST00000457215 NFIXQ14938 502 aa21.46■■□□□ 1.03
ITM2C-206ENST00000457215 BABAM1Q9NWV8 329 aa21.46■■□□□ 1.03
ITM2C-206ENST00000457215 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
ITM2C-206ENST00000457215 SCN7AQ01118 1682 aa21.45■■□□□ 1.02
ITM2C-206ENST00000457215 A0A087WZG4 1122 aa21.45■■□□□ 1.02
ITM2C-206ENST00000457215 CHL1O00533 1208 aa21.45■■□□□ 1.02
ITM2C-206ENST00000457215 YBX3P16989 372 aaKnown RBP eCLIP21.45■■□□□ 1.021e-6■□□□□ 8.8
ITM2C-206ENST00000457215 PARP3Q9Y6F1 533 aa21.45■■□□□ 1.02
ITM2C-206ENST00000457215 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
ITM2C-206ENST00000457215 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
ITM2C-206ENST00000457215 ZNF330Q9Y3S2 320 aaPredicted RBP21.44■■□□□ 1.02
ITM2C-206ENST00000457215 AFDNP55196 1824 aaKnown RBP21.43■■□□□ 1.02
ITM2C-206ENST00000457215 PXDNLA1KZ92 1463 aa21.43■■□□□ 1.02
ITM2C-206ENST00000457215 NRXN2Q9P2S2 1712 aa21.43■■□□□ 1.02
ITM2C-206ENST00000457215 BCORQ6W2J9 1755 aa21.42■■□□□ 1.02
ITM2C-206ENST00000457215 N4BP2Q86UW6 1770 aaPredicted RBP21.41■■□□□ 1.02
ITM2C-206ENST00000457215 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
ITM2C-206ENST00000457215 GPR162Q16538 588 aa21.41■■□□□ 1.02
ITM2C-206ENST00000457215 KRT24Q2M2I5 525 aa21.41■■□□□ 1.02
ITM2C-206ENST00000457215 TBC1D9BQ66K14 1250 aa21.41■■□□□ 1.02
ITM2C-206ENST00000457215 ZNF853P0CG23 659 aa21.4■■□□□ 1.02
ITM2C-206ENST00000457215 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
ITM2C-206ENST00000457215 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.01
ITM2C-206ENST00000457215 KCNA3P22001 575 aa21.39■■□□□ 1.01
ITM2C-206ENST00000457215 A0A0G2JLW4 131 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 SERPINB2P05120 415 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 TGFB2P61812 414 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 PDIA6Q15084 440 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 BICDL1Q6ZP65 573 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 LRP10Q7Z4F1 713 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
ITM2C-206ENST00000457215 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 WWC3Q9ULE0 1092 aa21.38■■□□□ 1.01
ITM2C-206ENST00000457215 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
ITM2C-206ENST00000457215 DPEP1P16444 411 aa21.37■■□□□ 1.01
ITM2C-206ENST00000457215 MBIPQ9NS73 344 aa21.36■■□□□ 1.01
ITM2C-206ENST00000457215 BRCA1P38398 1863 aaKnown RBP21.36■■□□□ 1.01
ITM2C-206ENST00000457215 CARMIL3Q8ND23 1372 aa21.35■■□□□ 1.01
ITM2C-206ENST00000457215 CHD4Q14839 1912 aa21.34■■□□□ 1.01
ITM2C-206ENST00000457215 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
ITM2C-206ENST00000457215 HLFQ16534 295 aa21.34■■□□□ 1.01
ITM2C-206ENST00000457215 PROSER3Q2NL68 480 aa21.34■■□□□ 1.01
ITM2C-206ENST00000457215 TTLL7Q6ZT98 887 aa21.34■■□□□ 1.01
ITM2C-206ENST00000457215 ERBB4Q15303 1308 aa21.33■■□□□ 1.01
ITM2C-206ENST00000457215 MYL6BP14649 208 aa21.33■■□□□ 1.01
ITM2C-206ENST00000457215 CLEC4GQ6UXB4 293 aa21.33■■□□□ 1.01
ITM2C-206ENST00000457215 NPM2Q86SE8 214 aaKnown RBP21.33■■□□□ 1.01
ITM2C-206ENST00000457215 NGEFQ8N5V2 710 aa21.33■■□□□ 1.01
ITM2C-206ENST00000457215 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
ITM2C-206ENST00000457215 RGL2O15211 777 aa21.32■■□□□ 1
ITM2C-206ENST00000457215 ANXA1P04083 346 aa21.32■■□□□ 1
ITM2C-206ENST00000457215 YY1P25490 414 aa21.32■■□□□ 1
ITM2C-206ENST00000457215 CHRNA5P30532 468 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms