RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KIF1AQ12756 1690 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 XIRP1Q702N8 1843 aaKnown RBP22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 PI4KAP2A4QPH2 592 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 PI4KAP1Q8N8J0 262 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 ESYT1Q9BSJ8 1104 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 ADCY9O60503 1353 aa22.52■■□□□ 1.2
SEMA3B-209ENST00000456560 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
SEMA3B-209ENST00000456560 CHMLP26374 656 aa22.51■■□□□ 1.19
SEMA3B-209ENST00000456560 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
SEMA3B-209ENST00000456560 GZF1Q9H116 711 aaPredicted RBP22.51■■□□□ 1.19
SEMA3B-209ENST00000456560 SSFA2P28290 1259 aa22.5■■□□□ 1.19
SEMA3B-209ENST00000456560 ARXQ96QS3 562 aa22.5■■□□□ 1.19
SEMA3B-209ENST00000456560 ADAMTS7Q9UKP4 1686 aa22.5■■□□□ 1.19
SEMA3B-209ENST00000456560 GOLGA6L3A6NEY3 463 aa22.5■■□□□ 1.19
SEMA3B-209ENST00000456560 ST18O60284 1047 aa22.5■■□□□ 1.19
SEMA3B-209ENST00000456560 DBF4Q9UBU7 674 aaPredicted RBP22.5■■□□□ 1.19
SEMA3B-209ENST00000456560 SIPA1L3O60292 1781 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 GIGYF1O75420 1035 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 ANXA1P04083 346 aa22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 PTMSP20962 102 aa22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 SURF6O75683 361 aaKnown RBP22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 PLEKHG5O94827 1062 aa22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 DDX17Q92841 729 aaKnown RBP22.49■■□□□ 1.19
SEMA3B-209ENST00000456560 RRAGDQ9NQL2 400 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-209ENST00000456560 ALS2Q96Q42 1657 aa22.48■■□□□ 1.19
SEMA3B-209ENST00000456560 RHPN1Q8TCX5 695 aa22.47■■□□□ 1.19
SEMA3B-209ENST00000456560 IL1RAPL2Q9NP60 686 aa22.47■■□□□ 1.19
SEMA3B-209ENST00000456560 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
SEMA3B-209ENST00000456560 SRGAP3O43295 1099 aa22.47■■□□□ 1.19
SEMA3B-209ENST00000456560 CADPS2Q86UW7 1296 aa22.47■■□□□ 1.19
SEMA3B-209ENST00000456560 UNC5CLQ8IV45 518 aa22.47■■□□□ 1.19
SEMA3B-209ENST00000456560 SKOR2Q2VWA4 1001 aaPredicted RBP22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 RILPL2Q969X0 211 aa22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 CYP2E1P05181 493 aaPredicted RBP22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 XRCC6P12956 609 aaKnown RBP eCLIP22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 IL17RAQ96F46 866 aa22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 CWC22Q9HCG8 908 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-209ENST00000456560 NUTM1Q86Y26 1132 aa22.45■■□□□ 1.18
SEMA3B-209ENST00000456560 ERBB3P21860 1342 aa22.45■■□□□ 1.18
SEMA3B-209ENST00000456560 ALDH1L1O75891 902 aa22.45■■□□□ 1.18
SEMA3B-209ENST00000456560 NUCB2P80303 420 aa22.45■■□□□ 1.18
SEMA3B-209ENST00000456560 PROSER3Q2NL68 480 aa22.45■■□□□ 1.18
SEMA3B-209ENST00000456560 KIF1BPQ96EK5 621 aa22.45■■□□□ 1.18
SEMA3B-209ENST00000456560 MTX1Q13505 466 aa22.44■■□□□ 1.18
SEMA3B-209ENST00000456560 KSR2Q6VAB6 950 aa22.43■■□□□ 1.18
SEMA3B-209ENST00000456560 PI4K2BQ8TCG2 481 aa22.43■■□□□ 1.18
SEMA3B-209ENST00000456560 DCCP43146 1447 aa22.43■■□□□ 1.18
SEMA3B-209ENST00000456560 BAG4O95429 457 aaKnown RBP22.43■■□□□ 1.18
SEMA3B-209ENST00000456560 ANAPC15P60006 121 aa22.43■■□□□ 1.18
SEMA3B-209ENST00000456560 MAP3K2Q9Y2U5 619 aa22.43■■□□□ 1.18
SEMA3B-209ENST00000456560 PRAMEF22A3QJZ6 481 aa22.42■■□□□ 1.18
SEMA3B-209ENST00000456560 EPB41L2O43491 1005 aaKnown RBP22.42■■□□□ 1.18
SEMA3B-209ENST00000456560 HSP90AB4PQ58FF6 505 aa22.42■■□□□ 1.18
SEMA3B-209ENST00000456560 MCCP23508 829 aa22.41■■□□□ 1.18
SEMA3B-209ENST00000456560 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
SEMA3B-209ENST00000456560 PALD1Q9ULE6 856 aa22.41■■□□□ 1.18
SEMA3B-209ENST00000456560 ZC3H6P61129 1189 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-209ENST00000456560 ISY1Q9ULR0 285 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-209ENST00000456560 USP42Q9H9J4 1324 aaKnown RBP22.4■■□□□ 1.18
SEMA3B-209ENST00000456560 AK9Q5TCS8 1911 aa22.4■■□□□ 1.18
SEMA3B-209ENST00000456560 NEK4P51957 841 aa22.4■■□□□ 1.18
SEMA3B-209ENST00000456560 ZGPATQ8N5A5 531 aaKnown RBP22.4■■□□□ 1.18
SEMA3B-209ENST00000456560 ANO2Q9NQ90 1003 aa22.4■■□□□ 1.18
SEMA3B-209ENST00000456560 GOLGA6L22H0YM25 854 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 MCM2P49736 904 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 SLAIN2Q9P270 581 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 MRE11P49959 708 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 PDIA6Q15084 440 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 PANK2Q9BZ23 570 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 IL25Q9H293 177 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 COL18A1P39060 1754 aa22.38■■□□□ 1.17
SEMA3B-209ENST00000456560 PKP1Q13835 747 aa22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 C9orf78Q9NZ63 289 aaPredicted RBP22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 SCN11AQ9UI33 1791 aa22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 RAPGEF4Q8WZA2 1011 aa22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 TMX3Q96JJ7 454 aa22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 HDAC5Q9UQL6 1122 aa22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 UTYO14607 1347 aa22.37■■□□□ 1.17
SEMA3B-209ENST00000456560 KDM6AO15550 1401 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-209ENST00000456560 CRYBG1Q9Y4K1 1723 aa22.36■■□□□ 1.17
SEMA3B-209ENST00000456560 BRINP3Q76B58 766 aa22.36■■□□□ 1.17
SEMA3B-209ENST00000456560 LINS1Q8NG48 757 aa22.36■■□□□ 1.17
SEMA3B-209ENST00000456560 ABCC6O95255 1503 aa22.36■■□□□ 1.17
SEMA3B-209ENST00000456560 NPHP3Q7Z494 1330 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 SLC52A2Q9HAB3 445 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 ZDHHC9Q9Y397 364 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 TTC41PQ6P2S7 1318 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 MAP4K4O95819 1239 aaPredicted RBP22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 CUL4AQ13619 759 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 ZNF790Q6PG37 636 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 LTBP4Q8N2S1 1624 aa22.35■■□□□ 1.17
SEMA3B-209ENST00000456560 PHKG2P15735 406 aa22.34■■□□□ 1.17
SEMA3B-209ENST00000456560 HSPA4P34932 840 aa22.34■■□□□ 1.17
SEMA3B-209ENST00000456560 SGSM2O43147 1006 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms