RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 CACNA1FO60840 1977 aa24.31■■□□□ 1.48
SBDSP1-205ENST00000456312 KRT24Q2M2I5 525 aa24.3■■□□□ 1.48
SBDSP1-205ENST00000456312 LAS1LQ9Y4W2 734 aaKnown RBP24.3■■□□□ 1.48
SBDSP1-205ENST00000456312 PNPLA7Q6ZV29 1317 aa24.3■■□□□ 1.48
SBDSP1-205ENST00000456312 BCORQ6W2J9 1755 aa24.29■■□□□ 1.48
SBDSP1-205ENST00000456312 TEX13AQ9BXU3 409 aaPredicted RBP24.29■■□□□ 1.48
SBDSP1-205ENST00000456312 R3HDM1Q15032 1099 aaKnown RBP24.28■■□□□ 1.48
SBDSP1-205ENST00000456312 TSR2Q969E8 191 aaKnown RBP24.28■■□□□ 1.48
SBDSP1-205ENST00000456312 FANCIQ9NVI1 1328 aa24.28■■□□□ 1.48
SBDSP1-205ENST00000456312 ZBTB1Q9Y2K1 713 aa24.27■■□□□ 1.48
SBDSP1-205ENST00000456312 SCN7AQ01118 1682 aa24.27■■□□□ 1.48
SBDSP1-205ENST00000456312 PDGFDQ9GZP0 370 aaPredicted RBP24.26■■□□□ 1.47
SBDSP1-205ENST00000456312 CCDC87Q9NVE4 849 aa24.26■■□□□ 1.47
SBDSP1-205ENST00000456312 RPS6KA4O75676 772 aa24.25■■□□□ 1.47
SBDSP1-205ENST00000456312 HOXB7P09629 217 aa24.25■■□□□ 1.47
SBDSP1-205ENST00000456312 AK7Q96M32 723 aa24.25■■□□□ 1.47
SBDSP1-205ENST00000456312 SOS1Q07889 1333 aaPredicted RBP24.25■■□□□ 1.47
SBDSP1-205ENST00000456312 PSDA5PKW4 1024 aaPredicted RBP24.24■■□□□ 1.47
SBDSP1-205ENST00000456312 GNPATO15228 680 aa24.24■■□□□ 1.47
SBDSP1-205ENST00000456312 STARD3NLO95772 234 aa24.24■■□□□ 1.47
SBDSP1-205ENST00000456312 SSFA2P28290 1259 aa24.24■■□□□ 1.47
SBDSP1-205ENST00000456312 SMIM5Q71RC9 77 aa24.24■■□□□ 1.47
SBDSP1-205ENST00000456312 TRMT2AQ8IZ69 625 aaKnown RBP24.24■■□□□ 1.47
SBDSP1-205ENST00000456312 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
SBDSP1-205ENST00000456312 GOLGA2Q08379 1002 aa24.23■■□□□ 1.47
SBDSP1-205ENST00000456312 SLFN5Q08AF3 891 aa24.23■■□□□ 1.47
SBDSP1-205ENST00000456312 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
SBDSP1-205ENST00000456312 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
SBDSP1-205ENST00000456312 NBPF26B4DH59 902 aa24.22■■□□□ 1.47
SBDSP1-205ENST00000456312 A1BGP04217 495 aa24.22■■□□□ 1.47
SBDSP1-205ENST00000456312 NBPF10Q6P3W6 841 aaKnown RBP24.22■■□□□ 1.47
SBDSP1-205ENST00000456312 COL23A1Q86Y22 540 aaPredicted RBP24.22■■□□□ 1.47
SBDSP1-205ENST00000456312 NBPF15Q8N660 670 aa24.22■■□□□ 1.47
SBDSP1-205ENST00000456312 ZBED9Q6R2W3 1325 aa24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 EIF5P55010 431 aaKnown RBP24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 DUSP27Q5VZP5 1158 aa24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 TSPYL6Q8N831 410 aa24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 CDCA7LQ96GN5 454 aa24.21■■□□□ 1.47
SBDSP1-205ENST00000456312 COL15A1P39059 1388 aa24.2■■□□□ 1.46
SBDSP1-205ENST00000456312 ERBB4Q15303 1308 aa24.2■■□□□ 1.46
SBDSP1-205ENST00000456312 NUP98P52948 1817 aa24.2■■□□□ 1.46
SBDSP1-205ENST00000456312 ADRA2BP18089 450 aa24.2■■□□□ 1.46
SBDSP1-205ENST00000456312 PDIA6Q15084 440 aa24.2■■□□□ 1.46
SBDSP1-205ENST00000456312 RTCBQ9Y3I0 505 aaKnown RBP24.2■■□□□ 1.46
SBDSP1-205ENST00000456312 E9PSI1 815 aa24.19■■□□□ 1.46
SBDSP1-205ENST00000456312 IL6STP40189 918 aaPredicted RBP24.19■■□□□ 1.46
SBDSP1-205ENST00000456312 FLAD1Q8NFF5 587 aa24.19■■□□□ 1.46
SBDSP1-205ENST00000456312 MYH16Q9H6N6 1097 aa24.19■■□□□ 1.46
SBDSP1-205ENST00000456312 LRP5O75197 1615 aa24.19■■□□□ 1.46
SBDSP1-205ENST00000456312 PIP4K2AP48426 406 aaPredicted RBP24.17■■□□□ 1.46
SBDSP1-205ENST00000456312 ARHGEF1Q92888 912 aaKnown RBP24.17■■□□□ 1.46
SBDSP1-205ENST00000456312 CANXP27824 592 aaKnown RBP24.16■■□□□ 1.46
SBDSP1-205ENST00000456312 PHF14O94880 888 aa24.15■■□□□ 1.46
SBDSP1-205ENST00000456312 EXOSC9Q06265 439 aaKnown RBP24.15■■□□□ 1.46
SBDSP1-205ENST00000456312 ANKRD36CQ5JPF3 1778 aa24.15■■□□□ 1.46
SBDSP1-205ENST00000456312 TRAPPC3LQ5T215 181 aa24.14■■□□□ 1.45
SBDSP1-205ENST00000456312 SLC16A10Q8TF71 515 aa24.14■■□□□ 1.45
SBDSP1-205ENST00000456312 USP42Q9H9J4 1324 aaKnown RBP24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 ELL2O00472 640 aaPredicted RBP24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 VAMP4O75379 141 aa24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 EIF2S2P20042 333 aaKnown RBP24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 PROSER3Q2NL68 480 aa24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 TWISTNBQ3B726 338 aaPredicted RBP24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 HDGFL1Q5TGJ6 251 aa24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 ARFGEF2Q9Y6D5 1785 aa24.13■■□□□ 1.45
SBDSP1-205ENST00000456312 AFDNP55196 1824 aaKnown RBP24.12■■□□□ 1.45
SBDSP1-205ENST00000456312 NRXN2Q9P2S2 1712 aa24.11■■□□□ 1.45
SBDSP1-205ENST00000456312 SGIP1Q9BQI5 828 aa24.11■■□□□ 1.45
SBDSP1-205ENST00000456312 DDX21Q9NR30 783 aaKnown RBP eCLIP24.11■■□□□ 1.45
SBDSP1-205ENST00000456312 BCL2L12Q9HB09 334 aa24.1■■□□□ 1.45
SBDSP1-205ENST00000456312 CHPF2Q9P2E5 772 aa24.1■■□□□ 1.45
SBDSP1-205ENST00000456312 NARFQ9UHQ1 456 aa24.1■■□□□ 1.45
SBDSP1-205ENST00000456312 ANXA1P04083 346 aa24.09■■□□□ 1.45
SBDSP1-205ENST00000456312 GYS1P13807 737 aa24.09■■□□□ 1.45
SBDSP1-205ENST00000456312 NECTIN2Q92692 538 aa24.09■■□□□ 1.45
SBDSP1-205ENST00000456312 MTFR1LQ9H019 292 aa24.09■■□□□ 1.45
SBDSP1-205ENST00000456312 SRP68Q9UHB9 627 aaKnown RBP24.09■■□□□ 1.45
SBDSP1-205ENST00000456312 KIF13BQ9NQT8 1826 aa24.08■■□□□ 1.45
SBDSP1-205ENST00000456312 A0A087WZG4 1122 aa24.07■■□□□ 1.44
SBDSP1-205ENST00000456312 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
SBDSP1-205ENST00000456312 ZBTB7AO95365 584 aa24.07■■□□□ 1.44
SBDSP1-205ENST00000456312 RFC4P35249 363 aa24.07■■□□□ 1.44
SBDSP1-205ENST00000456312 PTGER2P43116 358 aa24.07■■□□□ 1.44
SBDSP1-205ENST00000456312 DBF4Q9UBU7 674 aaPredicted RBP24.07■■□□□ 1.44
SBDSP1-205ENST00000456312 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
SBDSP1-205ENST00000456312 MYL6BP14649 208 aa24.06■■□□□ 1.44
SBDSP1-205ENST00000456312 CCDC30Q5VVM6 783 aa24.05■■□□□ 1.44
SBDSP1-205ENST00000456312 USPL1Q5W0Q7 1092 aa24.05■■□□□ 1.44
SBDSP1-205ENST00000456312 TTLL7Q6ZT98 887 aa24.05■■□□□ 1.44
SBDSP1-205ENST00000456312 DZIP3Q86Y13 1208 aaKnown RBP24.05■■□□□ 1.44
SBDSP1-205ENST00000456312 TBC1D2BQ9UPU7 963 aa24.05■■□□□ 1.44
SBDSP1-205ENST00000456312 RGL2O15211 777 aa24.04■■□□□ 1.44
SBDSP1-205ENST00000456312 FKBP8Q14318 412 aa24.03■■□□□ 1.44
SBDSP1-205ENST00000456312 ZNF330Q9Y3S2 320 aaPredicted RBP24.03■■□□□ 1.44
SBDSP1-205ENST00000456312 MSH5O43196 834 aa24.02■■□□□ 1.44
SBDSP1-205ENST00000456312 CHMP4AQ9BY43 222 aa24.02■■□□□ 1.44
SBDSP1-205ENST00000456312 HYPKQ9NX55 129 aa24.02■■□□□ 1.44
SBDSP1-205ENST00000456312 MAP3K15Q6ZN16 1313 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms