RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 SRP68Q9UHB9 627 aaKnown RBP18.42■□□□□ 0.54
LINC01563-201ENST00000456235 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
LINC01563-201ENST00000456235 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
LINC01563-201ENST00000456235 A1BGP04217 495 aa18.41■□□□□ 0.54
LINC01563-201ENST00000456235 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
LINC01563-201ENST00000456235 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
LINC01563-201ENST00000456235 MTFR1LQ9H019 292 aa18.41■□□□□ 0.54
LINC01563-201ENST00000456235 SPON1Q9HCB6 807 aa18.41■□□□□ 0.54
LINC01563-201ENST00000456235 SSFA2P28290 1259 aa18.4■□□□□ 0.54
LINC01563-201ENST00000456235 PTGER2P43116 358 aa18.4■□□□□ 0.54
LINC01563-201ENST00000456235 ARHGEF1Q92888 912 aaKnown RBP18.4■□□□□ 0.54
LINC01563-201ENST00000456235 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
LINC01563-201ENST00000456235 COL15A1P39059 1388 aa18.4■□□□□ 0.54
LINC01563-201ENST00000456235 SCN7AQ01118 1682 aa18.39■□□□□ 0.53
LINC01563-201ENST00000456235 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
LINC01563-201ENST00000456235 RPS6KA4O75676 772 aa18.39■□□□□ 0.53
LINC01563-201ENST00000456235 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
LINC01563-201ENST00000456235 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
LINC01563-201ENST00000456235 BCORQ6W2J9 1755 aa18.38■□□□□ 0.53
LINC01563-201ENST00000456235 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
LINC01563-201ENST00000456235 TRAPPC3LQ5T215 181 aa18.38■□□□□ 0.53
LINC01563-201ENST00000456235 RC3H1Q5TC82 1133 aaKnown RBP18.38■□□□□ 0.53
LINC01563-201ENST00000456235 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
LINC01563-201ENST00000456235 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
LINC01563-201ENST00000456235 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
LINC01563-201ENST00000456235 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
LINC01563-201ENST00000456235 CHL1O00533 1208 aa18.36■□□□□ 0.53
LINC01563-201ENST00000456235 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
LINC01563-201ENST00000456235 STARD3NLO95772 234 aa18.36■□□□□ 0.53
LINC01563-201ENST00000456235 RFC4P35249 363 aa18.36■□□□□ 0.53
LINC01563-201ENST00000456235 ARXQ96QS3 562 aa18.36■□□□□ 0.53
LINC01563-201ENST00000456235 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
LINC01563-201ENST00000456235 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
LINC01563-201ENST00000456235 SGIP1Q9BQI5 828 aa18.35■□□□□ 0.53
LINC01563-201ENST00000456235 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
LINC01563-201ENST00000456235 ANXA1P04083 346 aa18.34■□□□□ 0.53
LINC01563-201ENST00000456235 USPL1Q5W0Q7 1092 aa18.34■□□□□ 0.53
LINC01563-201ENST00000456235 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
LINC01563-201ENST00000456235 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
LINC01563-201ENST00000456235 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
LINC01563-201ENST00000456235 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
LINC01563-201ENST00000456235 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
LINC01563-201ENST00000456235 MYL6BP14649 208 aa18.33■□□□□ 0.52
LINC01563-201ENST00000456235 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
LINC01563-201ENST00000456235 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
LINC01563-201ENST00000456235 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
LINC01563-201ENST00000456235 GYS1P13807 737 aa18.32■□□□□ 0.52
LINC01563-201ENST00000456235 FKBP8Q14318 412 aa18.32■□□□□ 0.52
LINC01563-201ENST00000456235 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
LINC01563-201ENST00000456235 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
LINC01563-201ENST00000456235 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
LINC01563-201ENST00000456235 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
LINC01563-201ENST00000456235 ADRA2BP18089 450 aa18.31■□□□□ 0.52
LINC01563-201ENST00000456235 POLD1P28340 1107 aa18.31■□□□□ 0.52
LINC01563-201ENST00000456235 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
LINC01563-201ENST00000456235 GNAI1P63096 354 aa18.31■□□□□ 0.52
LINC01563-201ENST00000456235 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
LINC01563-201ENST00000456235 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
LINC01563-201ENST00000456235 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
LINC01563-201ENST00000456235 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
LINC01563-201ENST00000456235 ZPR1O75312 459 aa18.29■□□□□ 0.52
LINC01563-201ENST00000456235 MMP10P09238 476 aa18.29■□□□□ 0.52
LINC01563-201ENST00000456235 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
LINC01563-201ENST00000456235 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
LINC01563-201ENST00000456235 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
LINC01563-201ENST00000456235 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
LINC01563-201ENST00000456235 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
LINC01563-201ENST00000456235 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
LINC01563-201ENST00000456235 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
LINC01563-201ENST00000456235 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
LINC01563-201ENST00000456235 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
LINC01563-201ENST00000456235 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
LINC01563-201ENST00000456235 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
LINC01563-201ENST00000456235 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
LINC01563-201ENST00000456235 DDR1Q08345 913 aa18.27■□□□□ 0.52
LINC01563-201ENST00000456235 DZIP3Q86Y13 1208 aaKnown RBP18.27■□□□□ 0.52
LINC01563-201ENST00000456235 WWC3Q9ULE0 1092 aa18.27■□□□□ 0.52
LINC01563-201ENST00000456235 NUP98P52948 1817 aa18.27■□□□□ 0.52
LINC01563-201ENST00000456235 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.51
LINC01563-201ENST00000456235 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
LINC01563-201ENST00000456235 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
LINC01563-201ENST00000456235 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
LINC01563-201ENST00000456235 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
LINC01563-201ENST00000456235 CAMTA2O94983 1202 aa18.25■□□□□ 0.51
LINC01563-201ENST00000456235 PDIA6Q15084 440 aa18.25■□□□□ 0.51
LINC01563-201ENST00000456235 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
LINC01563-201ENST00000456235 KIAA1551Q9HCM1 1747 aa18.25■□□□□ 0.51
LINC01563-201ENST00000456235 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
LINC01563-201ENST00000456235 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
LINC01563-201ENST00000456235 ZBTB3Q9H5J0 574 aa18.24■□□□□ 0.51
LINC01563-201ENST00000456235 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
LINC01563-201ENST00000456235 A0A087WZG4 1122 aa18.23■□□□□ 0.51
LINC01563-201ENST00000456235 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
LINC01563-201ENST00000456235 NFIXQ14938 502 aa18.23■□□□□ 0.51
LINC01563-201ENST00000456235 HLFQ16534 295 aa18.23■□□□□ 0.51
LINC01563-201ENST00000456235 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
LINC01563-201ENST00000456235 ANKRD36CQ5JPF3 1778 aa18.22■□□□□ 0.51
LINC01563-201ENST00000456235 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
LINC01563-201ENST00000456235 KIF13BQ9NQT8 1826 aa18.22■□□□□ 0.51
LINC01563-201ENST00000456235 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms