RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 GPAMQ9HCL2 828 aa9.34□□□□□ -0.91
LINC00161-202ENST00000455939 SLC35F4A4IF30 521 aa9.33□□□□□ -0.92
LINC00161-202ENST00000455939 PPP1R12BO60237 982 aaPredicted RBP9.33□□□□□ -0.92
LINC00161-202ENST00000455939 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
LINC00161-202ENST00000455939 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
LINC00161-202ENST00000455939 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
LINC00161-202ENST00000455939 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
LINC00161-202ENST00000455939 PSMA6P60900 246 aaKnown RBP9.32□□□□□ -0.92
LINC00161-202ENST00000455939 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
LINC00161-202ENST00000455939 ATAD2Q6PL18 1390 aa9.32□□□□□ -0.92
LINC00161-202ENST00000455939 SERTM1A2A2V5 107 aa9.31□□□□□ -0.92
LINC00161-202ENST00000455939 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
LINC00161-202ENST00000455939 PRMT3O60678 531 aa9.31□□□□□ -0.92
LINC00161-202ENST00000455939 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
LINC00161-202ENST00000455939 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
LINC00161-202ENST00000455939 L3MBTL2Q969R5 705 aa9.31□□□□□ -0.92
LINC00161-202ENST00000455939 CDC14CA4D256 554 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 ITGA6P23229 1130 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 NOS2P35228 1153 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 SWI5Q1ZZU3 235 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 SLC16A10Q8TF71 515 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 ZDHHC1Q8WTX9 485 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
LINC00161-202ENST00000455939 F11P03951 625 aa9.29□□□□□ -0.92
LINC00161-202ENST00000455939 MSX1P28360 303 aa9.29□□□□□ -0.92
LINC00161-202ENST00000455939 TEAD4Q15561 434 aa9.29□□□□□ -0.92
LINC00161-202ENST00000455939 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
LINC00161-202ENST00000455939 C21orf2O43822 256 aa9.28□□□□□ -0.92
LINC00161-202ENST00000455939 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
LINC00161-202ENST00000455939 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
LINC00161-202ENST00000455939 ZNF295-AS1Q8N0V1 137 aa9.28□□□□□ -0.92
LINC00161-202ENST00000455939 PGBD3Q8N328 593 aa9.28□□□□□ -0.92
LINC00161-202ENST00000455939 IGFBP4P22692 258 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 FAM69CQ0P6D2 419 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 ARSJQ5FYB0 599 aaPredicted RBP9.27□□□□□ -0.93
LINC00161-202ENST00000455939 BICDL1Q6ZP65 573 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 NGLY1Q96IV0 654 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 CUEDC1Q9NWM3 386 aaPredicted RBP9.27□□□□□ -0.93
LINC00161-202ENST00000455939 HCN4Q9Y3Q4 1203 aa9.27□□□□□ -0.93
LINC00161-202ENST00000455939 H3BM21 787 aa9.26□□□□□ -0.93
LINC00161-202ENST00000455939 EML1O00423 815 aa9.26□□□□□ -0.93
LINC00161-202ENST00000455939 WEE1P30291 646 aa9.26□□□□□ -0.93
LINC00161-202ENST00000455939 TXLNAP40222 546 aa9.26□□□□□ -0.93
LINC00161-202ENST00000455939 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
LINC00161-202ENST00000455939 H7C1W4 665 aa9.25□□□□□ -0.93
LINC00161-202ENST00000455939 WIPF1O43516 503 aa9.25□□□□□ -0.93
LINC00161-202ENST00000455939 VWA5B2Q8N398 1253 aa9.25□□□□□ -0.93
LINC00161-202ENST00000455939 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
LINC00161-202ENST00000455939 ZDHHC3Q9NYG2 299 aa9.25□□□□□ -0.93
LINC00161-202ENST00000455939 ATP4AP20648 1035 aa9.24□□□□□ -0.93
LINC00161-202ENST00000455939 TRIM22Q8IYM9 498 aa9.24□□□□□ -0.93
LINC00161-202ENST00000455939 RETREG2Q8NC44 543 aa9.24□□□□□ -0.93
LINC00161-202ENST00000455939 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
LINC00161-202ENST00000455939 CLP1Q92989 425 aaKnown RBP9.24□□□□□ -0.93
LINC00161-202ENST00000455939 NUCKS1Q9H1E3 243 aaKnown RBP9.24□□□□□ -0.93
LINC00161-202ENST00000455939 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
LINC00161-202ENST00000455939 TMEM88BA6NKF7 163 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 FOXO3O43524 673 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 DBN1Q16643 649 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 EFHC2Q5JST6 749 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 SV2AQ7L0J3 742 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 STAG2Q8N3U4 1231 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 RHPN1Q8TCX5 695 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 IRF7Q92985 503 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 PHACTR1Q9C0D0 580 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 NEUROD4Q9HD90 331 aa9.23□□□□□ -0.93
LINC00161-202ENST00000455939 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
LINC00161-202ENST00000455939 ALDH16A1Q8IZ83 802 aa9.22□□□□□ -0.93
LINC00161-202ENST00000455939 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
LINC00161-202ENST00000455939 MKNK1Q9BUB5 465 aa9.22□□□□□ -0.93
LINC00161-202ENST00000455939 A0A1W2PNR3 127 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 HIRAP54198 1017 aaPredicted RBP9.21□□□□□ -0.94
LINC00161-202ENST00000455939 OCLNQ16625 522 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 GTPBP3Q969Y2 492 aaKnown RBP9.21□□□□□ -0.94
LINC00161-202ENST00000455939 GMCL1Q96IK5 515 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 CRISPLD1Q9H336 500 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.94
LINC00161-202ENST00000455939 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
LINC00161-202ENST00000455939 GPR25O00155 361 aa9.2□□□□□ -0.94
LINC00161-202ENST00000455939 NANOS1Q8WY41 292 aaKnown RBP9.2□□□□□ -0.94
LINC00161-202ENST00000455939 ZIC5Q96T25 663 aa9.2□□□□□ -0.94
LINC00161-202ENST00000455939 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
LINC00161-202ENST00000455939 C1orf53Q5VUE5 145 aa9.19□□□□□ -0.94
LINC00161-202ENST00000455939 POTEAQ6S8J7 498 aa9.19□□□□□ -0.94
LINC00161-202ENST00000455939 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
LINC00161-202ENST00000455939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINC00161-202ENST00000455939 LBRQ14739 615 aaKnown RBP9.18□□□□□ -0.94
LINC00161-202ENST00000455939 LRRC69Q6ZNQ3 347 aa9.18□□□□□ -0.94
LINC00161-202ENST00000455939 STK17AQ9UEE5 414 aa9.18□□□□□ -0.94
LINC00161-202ENST00000455939 VSIG8P0DPA2 414 aa9.17□□□□□ -0.94
LINC00161-202ENST00000455939 INSM1Q01101 510 aaPredicted RBP9.17□□□□□ -0.94
LINC00161-202ENST00000455939 PDE4CQ08493 712 aa9.17□□□□□ -0.94
LINC00161-202ENST00000455939 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
LINC00161-202ENST00000455939 THBS1P07996 1170 aa9.16□□□□□ -0.94
LINC00161-202ENST00000455939 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms