RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 SSFA2P28290 1259 aa19.22■□□□□ 0.67
CLCN1-203ENST00000455478 RTCBQ9Y3I0 505 aaKnown RBP19.22■□□□□ 0.67
CLCN1-203ENST00000455478 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
CLCN1-203ENST00000455478 SRCAPQ6ZRS2 3230 aa19.22■□□□□ 0.67
CLCN1-203ENST00000455478 PHF14O94880 888 aa19.21■□□□□ 0.67
CLCN1-203ENST00000455478 STARD3NLO95772 234 aa19.21■□□□□ 0.67
CLCN1-203ENST00000455478 CFAP44Q96MT7 982 aa19.21■□□□□ 0.67
CLCN1-203ENST00000455478 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
CLCN1-203ENST00000455478 MSH5O43196 834 aa19.2■□□□□ 0.66
CLCN1-203ENST00000455478 GIGYF1O75420 1035 aaPredicted RBP19.2■□□□□ 0.66
CLCN1-203ENST00000455478 CALD1Q05682 793 aaKnown RBP19.2■□□□□ 0.66
CLCN1-203ENST00000455478 SLC16A10Q8TF71 515 aa19.2■□□□□ 0.66
CLCN1-203ENST00000455478 A1BGP04217 495 aa19.19■□□□□ 0.66
CLCN1-203ENST00000455478 TRAPPC3LQ5T215 181 aa19.19■□□□□ 0.66
CLCN1-203ENST00000455478 ARHGEF1Q92888 912 aaKnown RBP19.19■□□□□ 0.66
CLCN1-203ENST00000455478 MTFR1LQ9H019 292 aa19.19■□□□□ 0.66
CLCN1-203ENST00000455478 IFT57Q9NWB7 429 aa19.19■□□□□ 0.66
CLCN1-203ENST00000455478 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
CLCN1-203ENST00000455478 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
CLCN1-203ENST00000455478 ADRA2BP18089 450 aa19.18■□□□□ 0.66
CLCN1-203ENST00000455478 SPON1Q9HCB6 807 aa19.18■□□□□ 0.66
CLCN1-203ENST00000455478 MBIPQ9NS73 344 aa19.18■□□□□ 0.66
CLCN1-203ENST00000455478 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
CLCN1-203ENST00000455478 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
CLCN1-203ENST00000455478 GNAI1P63096 354 aa19.17■□□□□ 0.66
CLCN1-203ENST00000455478 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
CLCN1-203ENST00000455478 EIF5P55010 431 aaKnown RBP19.16■□□□□ 0.66
CLCN1-203ENST00000455478 KRT24Q2M2I5 525 aa19.16■□□□□ 0.66
CLCN1-203ENST00000455478 PTGER2P43116 358 aa19.15■□□□□ 0.66
CLCN1-203ENST00000455478 WDR63Q8IWG1 891 aa19.15■□□□□ 0.66
CLCN1-203ENST00000455478 SGIP1Q9BQI5 828 aa19.15■□□□□ 0.66
CLCN1-203ENST00000455478 IL16Q14005 1332 aa19.15■□□□□ 0.66
CLCN1-203ENST00000455478 LRP5O75197 1615 aa19.14■□□□□ 0.66
CLCN1-203ENST00000455478 COL24A1Q17RW2 1714 aa19.14■□□□□ 0.66
CLCN1-203ENST00000455478 NBPF26B4DH59 902 aa19.13■□□□□ 0.65
CLCN1-203ENST00000455478 RFC4P35249 363 aa19.13■□□□□ 0.65
CLCN1-203ENST00000455478 IL6STP40189 918 aaPredicted RBP19.13■□□□□ 0.65
CLCN1-203ENST00000455478 PIP4K2AP48426 406 aaPredicted RBP19.13■□□□□ 0.65
CLCN1-203ENST00000455478 NBPF10Q6P3W6 841 aaKnown RBP19.13■□□□□ 0.65
CLCN1-203ENST00000455478 NBPF15Q8N660 670 aa19.13■□□□□ 0.65
CLCN1-203ENST00000455478 C4AP0C0L4 1744 aa19.13■□□□□ 0.65
CLCN1-203ENST00000455478 LAMB4A4D0S4 1761 aa19.13■□□□□ 0.65
CLCN1-203ENST00000455478 COL15A1P39059 1388 aa19.12■□□□□ 0.65
CLCN1-203ENST00000455478 ZNF521Q96K83 1311 aa19.12■□□□□ 0.65
CLCN1-203ENST00000455478 MSL1Q68DK7 614 aa19.12■□□□□ 0.65
CLCN1-203ENST00000455478 GYS1P13807 737 aa19.11■□□□□ 0.65
CLCN1-203ENST00000455478 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
CLCN1-203ENST00000455478 SRP68Q9UHB9 627 aaKnown RBP19.11■□□□□ 0.65
CLCN1-203ENST00000455478 USP42Q9H9J4 1324 aaKnown RBP19.1■□□□□ 0.65
CLCN1-203ENST00000455478 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
CLCN1-203ENST00000455478 EIF2S2P20042 333 aaKnown RBP19.09■□□□□ 0.65
CLCN1-203ENST00000455478 DUSP27Q5VZP5 1158 aa19.09■□□□□ 0.65
CLCN1-203ENST00000455478 C8orf58Q8NAV2 365 aa19.09■□□□□ 0.65
CLCN1-203ENST00000455478 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
CLCN1-203ENST00000455478 A0A087WZG4 1122 aa19.08■□□□□ 0.64
CLCN1-203ENST00000455478 HOXB7P09629 217 aa19.08■□□□□ 0.64
CLCN1-203ENST00000455478 PDIA6Q15084 440 aa19.08■□□□□ 0.64
CLCN1-203ENST00000455478 USPL1Q5W0Q7 1092 aa19.08■□□□□ 0.64
CLCN1-203ENST00000455478 ZNF330Q9Y3S2 320 aaPredicted RBP19.08■□□□□ 0.64
CLCN1-203ENST00000455478 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 ZPR1O75312 459 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 POLD1P28340 1107 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 FKBP8Q14318 412 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 NLGN1Q8N2Q7 840 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
CLCN1-203ENST00000455478 ELL2O00472 640 aaPredicted RBP19.06■□□□□ 0.64
CLCN1-203ENST00000455478 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
CLCN1-203ENST00000455478 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
CLCN1-203ENST00000455478 ARXQ96QS3 562 aa19.06■□□□□ 0.64
CLCN1-203ENST00000455478 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
CLCN1-203ENST00000455478 LRP10Q7Z4F1 713 aa19.05■□□□□ 0.64
CLCN1-203ENST00000455478 MYL6BP14649 208 aa19.04■□□□□ 0.64
CLCN1-203ENST00000455478 PROSER3Q2NL68 480 aa19.04■□□□□ 0.64
CLCN1-203ENST00000455478 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
CLCN1-203ENST00000455478 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
CLCN1-203ENST00000455478 DZIP3Q86Y13 1208 aaKnown RBP19.04■□□□□ 0.64
CLCN1-203ENST00000455478 PPP1R1BQ9UD71 204 aaPredicted RBP19.04■□□□□ 0.64
CLCN1-203ENST00000455478 CAMTA2O94983 1202 aa19.03■□□□□ 0.64
CLCN1-203ENST00000455478 ANXA1P04083 346 aa19.03■□□□□ 0.64
CLCN1-203ENST00000455478 MMP10P09238 476 aa19.03■□□□□ 0.64
CLCN1-203ENST00000455478 TM4SF1P30408 202 aa19.03■□□□□ 0.64
CLCN1-203ENST00000455478 GOLGA2Q08379 1002 aa19.03■□□□□ 0.64
CLCN1-203ENST00000455478 DDX21Q9NR30 783 aaKnown RBP eCLIP19.03■□□□□ 0.64
CLCN1-203ENST00000455478 MYH16Q9H6N6 1097 aa19.02■□□□□ 0.64
CLCN1-203ENST00000455478 EXOSC9Q06265 439 aaKnown RBP19.01■□□□□ 0.63
CLCN1-203ENST00000455478 TTLL7Q6ZT98 887 aa19.01■□□□□ 0.63
CLCN1-203ENST00000455478 CHPF2Q9P2E5 772 aa19.01■□□□□ 0.63
CLCN1-203ENST00000455478 DDR1Q08345 913 aa19■□□□□ 0.63
CLCN1-203ENST00000455478 SLFN5Q08AF3 891 aa19■□□□□ 0.63
CLCN1-203ENST00000455478 NFIXQ14938 502 aa19■□□□□ 0.63
CLCN1-203ENST00000455478 TWISTNBQ3B726 338 aaPredicted RBP19■□□□□ 0.63
CLCN1-203ENST00000455478 CDCA7LQ96GN5 454 aa19■□□□□ 0.63
CLCN1-203ENST00000455478 DBF4Q9UBU7 674 aaPredicted RBP19■□□□□ 0.63
CLCN1-203ENST00000455478 SCN7AQ01118 1682 aa19■□□□□ 0.63
CLCN1-203ENST00000455478 FHDC1Q9C0D6 1143 aaPredicted RBP18.99■□□□□ 0.63
CLCN1-203ENST00000455478 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
CLCN1-203ENST00000455478 E9PSI1 815 aa18.98■□□□□ 0.63
CLCN1-203ENST00000455478 POLRMTO00411 1230 aaKnown RBP18.98■□□□□ 0.63
CLCN1-203ENST00000455478 VAMP4O75379 141 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms