RNA–Protein interactions for RNA: ENST00000454403.1

TUBBP2-201, Transcript of tubulin beta pseudogene 2, humanhuman

BASIC

Gene TUBBP2, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP2-201ENST00000454403 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
TUBBP2-201ENST00000454403 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
TUBBP2-201ENST00000454403 HOXB7P09629 217 aa13.25□□□□□ -0.29
TUBBP2-201ENST00000454403 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
TUBBP2-201ENST00000454403 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
TUBBP2-201ENST00000454403 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
TUBBP2-201ENST00000454403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
TUBBP2-201ENST00000454403 GNPATO15228 680 aa13.24□□□□□ -0.29
TUBBP2-201ENST00000454403 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
TUBBP2-201ENST00000454403 MTFR1LQ9H019 292 aa13.24□□□□□ -0.29
TUBBP2-201ENST00000454403 UBR2Q8IWV8 1755 aa13.23□□□□□ -0.29
TUBBP2-201ENST00000454403 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
TUBBP2-201ENST00000454403 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
TUBBP2-201ENST00000454403 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
TUBBP2-201ENST00000454403 C5P01031 1676 aa13.23□□□□□ -0.29
TUBBP2-201ENST00000454403 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
TUBBP2-201ENST00000454403 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 A0A087WZG4 1122 aa13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
TUBBP2-201ENST00000454403 RGL2O15211 777 aa13.21□□□□□ -0.29
TUBBP2-201ENST00000454403 RFC4P35249 363 aa13.21□□□□□ -0.29
TUBBP2-201ENST00000454403 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
TUBBP2-201ENST00000454403 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
TUBBP2-201ENST00000454403 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 A1BGP04217 495 aa13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
TUBBP2-201ENST00000454403 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 MSH5O43196 834 aa13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
TUBBP2-201ENST00000454403 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 PHF14O94880 888 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 ARXQ96QS3 562 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 SYT17Q9BSW7 474 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 TJP1Q07157 1748 aa13.18□□□□□ -0.3
TUBBP2-201ENST00000454403 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
TUBBP2-201ENST00000454403 E9PSI1 815 aa13.17□□□□□ -0.3
TUBBP2-201ENST00000454403 ZPR1O75312 459 aa13.17□□□□□ -0.3
TUBBP2-201ENST00000454403 GYS1P13807 737 aa13.17□□□□□ -0.3
TUBBP2-201ENST00000454403 C8orf58Q8NAV2 365 aa13.17□□□□□ -0.3
TUBBP2-201ENST00000454403 TUBGCP6Q96RT7 1819 aa13.17□□□□□ -0.3
TUBBP2-201ENST00000454403 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 POLD1P28340 1107 aa13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 PDIA6Q15084 440 aa13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 DBF4Q9UBU7 674 aaPredicted RBP13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 COL15A1P39059 1388 aa13.16□□□□□ -0.3
TUBBP2-201ENST00000454403 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 ERVV-1B6SEH8 477 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 SLFN5Q08AF3 891 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
TUBBP2-201ENST00000454403 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
TUBBP2-201ENST00000454403 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
TUBBP2-201ENST00000454403 TM4SF1P30408 202 aa13.14□□□□□ -0.31
TUBBP2-201ENST00000454403 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
TUBBP2-201ENST00000454403 DZIP3Q86Y13 1208 aaKnown RBP13.14□□□□□ -0.31
TUBBP2-201ENST00000454403 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
TUBBP2-201ENST00000454403 VAMP4O75379 141 aa13.13□□□□□ -0.31
TUBBP2-201ENST00000454403 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
TUBBP2-201ENST00000454403 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
TUBBP2-201ENST00000454403 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
TUBBP2-201ENST00000454403 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
TUBBP2-201ENST00000454403 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
TUBBP2-201ENST00000454403 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 FKBP8Q14318 412 aa13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
TUBBP2-201ENST00000454403 MMP10P09238 476 aa13.11□□□□□ -0.31
TUBBP2-201ENST00000454403 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
TUBBP2-201ENST00000454403 MYL6BP14649 208 aa13.11□□□□□ -0.31
TUBBP2-201ENST00000454403 YY1P25490 414 aa13.11□□□□□ -0.31
TUBBP2-201ENST00000454403 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUBBP2-201ENST00000454403 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms