RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
LMO3-210ENST00000453727 ITPRIPQ8IWB1 547 aa10.67□□□□□ -0.7
LMO3-210ENST00000453727 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
LMO3-210ENST00000453727 SOS1Q07889 1333 aaPredicted RBP10.67□□□□□ -0.7
LMO3-210ENST00000453727 RGS3P49796 1198 aa10.67□□□□□ -0.7
LMO3-210ENST00000453727 BCL11BQ9C0K0 894 aaPredicted RBP10.67□□□□□ -0.7
LMO3-210ENST00000453727 TNS2Q63HR2 1409 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
LMO3-210ENST00000453727 ABCC4O15439 1325 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 RGS12O14924 1447 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 CACNA1FO60840 1977 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 ERVV-2B6SEH9 535 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 SLC39A6Q13433 755 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 CCDC30Q5VVM6 783 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 G2E3Q7L622 706 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 API5Q9BZZ5 524 aaKnown RBP10.66□□□□□ -0.7
LMO3-210ENST00000453727 DDX19BQ9UMR2 479 aa10.66□□□□□ -0.7
LMO3-210ENST00000453727 KDM2BQ8NHM5 1336 aa10.65□□□□□ -0.7
LMO3-210ENST00000453727 TPM2P07951 284 aa10.65□□□□□ -0.7
LMO3-210ENST00000453727 ZNF790Q6PG37 636 aa10.65□□□□□ -0.7
LMO3-210ENST00000453727 STK31Q9BXU1 1019 aa10.65□□□□□ -0.7
LMO3-210ENST00000453727 HEG1Q9ULI3 1381 aa10.65□□□□□ -0.7
LMO3-210ENST00000453727 A0A0G2JS52 829 aa10.65□□□□□ -0.71
LMO3-210ENST00000453727 HDGFL1Q5TGJ6 251 aa10.65□□□□□ -0.71
LMO3-210ENST00000453727 GJD4Q96KN9 370 aaPredicted RBP10.65□□□□□ -0.71
LMO3-210ENST00000453727 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.71
LMO3-210ENST00000453727 HOXB7P09629 217 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 EIF2S2P20042 333 aaKnown RBP10.64□□□□□ -0.71
LMO3-210ENST00000453727 FBXO41Q8TF61 875 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 TRPC5Q9UL62 973 aaPredicted RBP10.64□□□□□ -0.71
LMO3-210ENST00000453727 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 PTPRCP08575 1304 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 PRAMEF22A3QJZ6 481 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
LMO3-210ENST00000453727 TTC5Q8N0Z6 440 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
LMO3-210ENST00000453727 IGHDP01880 384 aa10.63□□□□□ -0.71
LMO3-210ENST00000453727 MARCH10Q8NA82 808 aaPredicted RBP10.63□□□□□ -0.71
LMO3-210ENST00000453727 C5P01031 1676 aa10.63□□□□□ -0.71
LMO3-210ENST00000453727 CENPQQ7L2Z9 268 aaPredicted RBP10.63□□□□□ -0.71
LMO3-210ENST00000453727 QTRT2Q9H974 415 aaKnown RBP10.63□□□□□ -0.71
LMO3-210ENST00000453727 ZBTB40Q9NUA8 1239 aa10.63□□□□□ -0.71
LMO3-210ENST00000453727 TMOD3Q9NYL9 352 aa10.63□□□□□ -0.71
LMO3-210ENST00000453727 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
LMO3-210ENST00000453727 FLIIQ13045 1269 aa10.62□□□□□ -0.71
LMO3-210ENST00000453727 SYTL4Q96C24 671 aaPredicted RBP10.62□□□□□ -0.71
LMO3-210ENST00000453727 ZNF496Q96IT1 587 aaPredicted RBP10.62□□□□□ -0.71
LMO3-210ENST00000453727 GLI3P10071 1580 aa10.62□□□□□ -0.71
LMO3-210ENST00000453727 ATRNO75882 1429 aa10.62□□□□□ -0.71
LMO3-210ENST00000453727 GOLGA6L3A6NEY3 463 aa10.62□□□□□ -0.71
LMO3-210ENST00000453727 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
LMO3-210ENST00000453727 F6X3S4 739 aa10.61□□□□□ -0.71
LMO3-210ENST00000453727 INTS3Q68E01 1043 aaKnown RBP10.61□□□□□ -0.71
LMO3-210ENST00000453727 PHAXQ9H814 394 aaKnown RBP10.61□□□□□ -0.71
LMO3-210ENST00000453727 FKBP5Q13451 457 aaPredicted RBP10.6□□□□□ -0.71
LMO3-210ENST00000453727 PIGBQ92521 554 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 FMNL2Q96PY5 1086 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 PAPPAQ13219 1627 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 ANXA1P04083 346 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 SKAP1Q86WV1 359 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 ARXQ96QS3 562 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 UBR2Q8IWV8 1755 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 ITGB4P16144 1822 aa10.6□□□□□ -0.71
LMO3-210ENST00000453727 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
LMO3-210ENST00000453727 ACSBG1Q96GR2 724 aa10.59□□□□□ -0.71
LMO3-210ENST00000453727 THSD7AQ9UPZ6 1657 aa10.59□□□□□ -0.71
LMO3-210ENST00000453727 BCL9O00512 1426 aa10.59□□□□□ -0.71
LMO3-210ENST00000453727 ONECUT3O60422 494 aaPredicted RBP10.59□□□□□ -0.71
LMO3-210ENST00000453727 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
LMO3-210ENST00000453727 SNRPA1P09661 255 aaKnown RBP10.59□□□□□ -0.71
LMO3-210ENST00000453727 PROSER3Q2NL68 480 aa10.59□□□□□ -0.71
LMO3-210ENST00000453727 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
LMO3-210ENST00000453727 DBF4Q9UBU7 674 aaPredicted RBP10.59□□□□□ -0.71
LMO3-210ENST00000453727 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
LMO3-210ENST00000453727 XRCC6P12956 609 aaKnown RBP eCLIP10.58□□□□□ -0.72
LMO3-210ENST00000453727 NCLP19338 710 aaKnown RBP10.58□□□□□ -0.72
LMO3-210ENST00000453727 ZNF772Q68DY9 489 aaPredicted RBP10.58□□□□□ -0.72
LMO3-210ENST00000453727 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
LMO3-210ENST00000453727 CHMP4BQ9H444 224 aaKnown RBP10.58□□□□□ -0.72
LMO3-210ENST00000453727 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
LMO3-210ENST00000453727 ASAP1Q9ULH1 1129 aa10.58□□□□□ -0.72
LMO3-210ENST00000453727 TAF7LQ5H9L4 462 aa10.58□□□□□ -0.72
LMO3-210ENST00000453727 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
LMO3-210ENST00000453727 RWDD1Q9H446 243 aaPredicted RBP10.58□□□□□ -0.72
LMO3-210ENST00000453727 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
LMO3-210ENST00000453727 KCPQ6ZWJ8 1503 aa10.58□□□□□ -0.72
LMO3-210ENST00000453727 LAMB4A4D0S4 1761 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 ATG3Q9NT62 314 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 USP16Q9Y5T5 823 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 ESPNB1AK53 854 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 CCT4P50991 539 aaKnown RBP10.57□□□□□ -0.72
LMO3-210ENST00000453727 PDIA6Q15084 440 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 FAM182BQ5T319 152 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 EP400Q96L91 3159 aa10.57□□□□□ -0.72
LMO3-210ENST00000453727 HDAC1Q13547 482 aaPredicted RBP10.56□□□□□ -0.72
LMO3-210ENST00000453727 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
LMO3-210ENST00000453727 DDX21Q9NR30 783 aaKnown RBP eCLIP10.56□□□□□ -0.72
LMO3-210ENST00000453727 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
LMO3-210ENST00000453727 KCNQ2O43526 872 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms