RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CICQ96RK0 1608 aaPredicted RBP18.95■□□□□ 0.62
NCKIPSD-207ENST00000453349 MSH5O43196 834 aa18.94■□□□□ 0.62
NCKIPSD-207ENST00000453349 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
NCKIPSD-207ENST00000453349 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
NCKIPSD-207ENST00000453349 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
NCKIPSD-207ENST00000453349 PHF14O94880 888 aa18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 SSFA2P28290 1259 aa18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 TRAPPC3LQ5T215 181 aa18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 NPM2Q86SE8 214 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 TSR2Q969E8 191 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 COL5A3P25940 1745 aaPredicted RBP18.93■□□□□ 0.62
NCKIPSD-207ENST00000453349 A1BGP04217 495 aa18.92■□□□□ 0.62
NCKIPSD-207ENST00000453349 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-207ENST00000453349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 HOXB7P09629 217 aa18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 ADRA2BP18089 450 aa18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 COL23A1Q86Y22 540 aaPredicted RBP18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 CHMP4AQ9BY43 222 aa18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 ZBTB1Q9Y2K1 713 aa18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 PNPLA7Q6ZV29 1317 aa18.91■□□□□ 0.62
NCKIPSD-207ENST00000453349 E9PSI1 815 aa18.9■□□□□ 0.62
NCKIPSD-207ENST00000453349 ELL2O00472 640 aaPredicted RBP18.9■□□□□ 0.62
NCKIPSD-207ENST00000453349 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
NCKIPSD-207ENST00000453349 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
NCKIPSD-207ENST00000453349 RFC4P35249 363 aa18.89■□□□□ 0.61
NCKIPSD-207ENST00000453349 SMIM5Q71RC9 77 aa18.89■□□□□ 0.61
NCKIPSD-207ENST00000453349 C8orf58Q8NAV2 365 aa18.89■□□□□ 0.61
NCKIPSD-207ENST00000453349 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.61
NCKIPSD-207ENST00000453349 ARHGEF1Q92888 912 aaKnown RBP18.89■□□□□ 0.61
NCKIPSD-207ENST00000453349 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
NCKIPSD-207ENST00000453349 A0A087WZG4 1122 aa18.88■□□□□ 0.61
NCKIPSD-207ENST00000453349 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-207ENST00000453349 SLFN5Q08AF3 891 aa18.88■□□□□ 0.61
NCKIPSD-207ENST00000453349 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-207ENST00000453349 SOS1Q07889 1333 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-207ENST00000453349 QSER1Q2KHR3 1735 aa18.88■□□□□ 0.61
NCKIPSD-207ENST00000453349 EIF5P55010 431 aaKnown RBP18.87■□□□□ 0.61
NCKIPSD-207ENST00000453349 HDGFL1Q5TGJ6 251 aa18.87■□□□□ 0.61
NCKIPSD-207ENST00000453349 AMIGO3Q86WK7 504 aa18.87■□□□□ 0.61
NCKIPSD-207ENST00000453349 NECTIN2Q92692 538 aa18.87■□□□□ 0.61
NCKIPSD-207ENST00000453349 PDGFDQ9GZP0 370 aaPredicted RBP18.87■□□□□ 0.61
NCKIPSD-207ENST00000453349 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 ERBB4Q15303 1308 aa18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 EXOSC9Q06265 439 aaKnown RBP18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 TWISTNBQ3B726 338 aaPredicted RBP18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 ARXQ96QS3 562 aa18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
NCKIPSD-207ENST00000453349 MYH14Q7Z406 1995 aaKnown RBP18.85■□□□□ 0.61
NCKIPSD-207ENST00000453349 ZPR1O75312 459 aa18.85■□□□□ 0.61
NCKIPSD-207ENST00000453349 MYL6BP14649 208 aa18.85■□□□□ 0.61
NCKIPSD-207ENST00000453349 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
NCKIPSD-207ENST00000453349 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
NCKIPSD-207ENST00000453349 TUBGCP6Q96RT7 1819 aa18.85■□□□□ 0.61
NCKIPSD-207ENST00000453349 COL15A1P39059 1388 aa18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 NBPF26B4DH59 902 aa18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 CCDC30Q5VVM6 783 aa18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 NBPF10Q6P3W6 841 aaKnown RBP18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 NBPF15Q8N660 670 aa18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 MTFR1LQ9H019 292 aa18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 DBF4Q9UBU7 674 aaPredicted RBP18.84■□□□□ 0.61
NCKIPSD-207ENST00000453349 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
NCKIPSD-207ENST00000453349 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.6
NCKIPSD-207ENST00000453349 ZBED9Q6R2W3 1325 aa18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 TRMT2AQ8IZ69 625 aaKnown RBP18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 SPON1Q9HCB6 807 aa18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 DDX21Q9NR30 783 aaKnown RBP eCLIP18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 NARFQ9UHQ1 456 aa18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
NCKIPSD-207ENST00000453349 CASZ1Q86V15 1759 aa18.81■□□□□ 0.6
NCKIPSD-207ENST00000453349 VAMP4O75379 141 aa18.81■□□□□ 0.6
NCKIPSD-207ENST00000453349 PDIA6Q15084 440 aa18.81■□□□□ 0.6
NCKIPSD-207ENST00000453349 USPL1Q5W0Q7 1092 aa18.81■□□□□ 0.6
NCKIPSD-207ENST00000453349 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
NCKIPSD-207ENST00000453349 STK31Q9BXU1 1019 aa18.8■□□□□ 0.6
NCKIPSD-207ENST00000453349 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
NCKIPSD-207ENST00000453349 CHPF2Q9P2E5 772 aa18.8■□□□□ 0.6
NCKIPSD-207ENST00000453349 USP42Q9H9J4 1324 aaKnown RBP18.79■□□□□ 0.6
NCKIPSD-207ENST00000453349 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
NCKIPSD-207ENST00000453349 ANXA1P04083 346 aa18.78■□□□□ 0.6
NCKIPSD-207ENST00000453349 GYS1P13807 737 aa18.78■□□□□ 0.6
NCKIPSD-207ENST00000453349 POLD1P28340 1107 aa18.78■□□□□ 0.6
NCKIPSD-207ENST00000453349 MSL1Q68DK7 614 aa18.78■□□□□ 0.6
NCKIPSD-207ENST00000453349 KIF6Q6ZMV9 814 aa18.78■□□□□ 0.6
NCKIPSD-207ENST00000453349 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
NCKIPSD-207ENST00000453349 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
NCKIPSD-207ENST00000453349 COPS6Q7L5N1 327 aa18.77■□□□□ 0.6
NCKIPSD-207ENST00000453349 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
NCKIPSD-207ENST00000453349 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 ERVV-1B6SEH8 477 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 TTLL7Q6ZT98 887 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
NCKIPSD-207ENST00000453349 XAGE3Q8WTP9 111 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms