RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
VPS8-213ENST00000453056 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
VPS8-213ENST00000453056 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
VPS8-213ENST00000453056 LAMB4A4D0S4 1761 aa20.34■□□□□ 0.85
VPS8-213ENST00000453056 SOS1Q07889 1333 aaPredicted RBP20.33■□□□□ 0.85
VPS8-213ENST00000453056 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
VPS8-213ENST00000453056 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.85
VPS8-213ENST00000453056 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
VPS8-213ENST00000453056 COL15A1P39059 1388 aa20.32■□□□□ 0.84
VPS8-213ENST00000453056 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
VPS8-213ENST00000453056 MIS18AQ9NYP9 233 aa20.31■□□□□ 0.84
VPS8-213ENST00000453056 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
VPS8-213ENST00000453056 APAF1O14727 1248 aa20.3■□□□□ 0.84
VPS8-213ENST00000453056 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
VPS8-213ENST00000453056 ZPR1O75312 459 aa20.29■□□□□ 0.84
VPS8-213ENST00000453056 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
VPS8-213ENST00000453056 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
VPS8-213ENST00000453056 NLGN1Q8N2Q7 840 aa20.29■□□□□ 0.84
VPS8-213ENST00000453056 FHDC1Q9C0D6 1143 aaPredicted RBP20.29■□□□□ 0.84
VPS8-213ENST00000453056 USP42Q9H9J4 1324 aaKnown RBP20.28■□□□□ 0.84
VPS8-213ENST00000453056 A0A087WZG4 1122 aa20.28■□□□□ 0.84
VPS8-213ENST00000453056 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
VPS8-213ENST00000453056 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
VPS8-213ENST00000453056 GYS1P13807 737 aa20.26■□□□□ 0.83
VPS8-213ENST00000453056 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
VPS8-213ENST00000453056 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
VPS8-213ENST00000453056 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
VPS8-213ENST00000453056 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
VPS8-213ENST00000453056 MMP10P09238 476 aa20.25■□□□□ 0.83
VPS8-213ENST00000453056 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
VPS8-213ENST00000453056 SYT17Q9BSW7 474 aa20.25■□□□□ 0.83
VPS8-213ENST00000453056 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
VPS8-213ENST00000453056 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
VPS8-213ENST00000453056 A1BGP04217 495 aa20.24■□□□□ 0.83
VPS8-213ENST00000453056 NARFQ9UHQ1 456 aa20.24■□□□□ 0.83
VPS8-213ENST00000453056 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
VPS8-213ENST00000453056 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
VPS8-213ENST00000453056 PRAMEF22A3QJZ6 481 aa20.23■□□□□ 0.83
VPS8-213ENST00000453056 GIGYF1O75420 1035 aaPredicted RBP20.23■□□□□ 0.83
VPS8-213ENST00000453056 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
VPS8-213ENST00000453056 CHL1O00533 1208 aa20.21■□□□□ 0.83
VPS8-213ENST00000453056 FKBP8Q14318 412 aa20.21■□□□□ 0.83
VPS8-213ENST00000453056 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
VPS8-213ENST00000453056 PARP3Q9Y6F1 533 aa20.21■□□□□ 0.83
VPS8-213ENST00000453056 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
VPS8-213ENST00000453056 CFAP44Q96MT7 982 aa20.2■□□□□ 0.82
VPS8-213ENST00000453056 IFT57Q9NWB7 429 aa20.2■□□□□ 0.82
VPS8-213ENST00000453056 GNAI1P63096 354 aa20.19■□□□□ 0.82
VPS8-213ENST00000453056 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
VPS8-213ENST00000453056 ERBB4Q15303 1308 aa20.19■□□□□ 0.82
VPS8-213ENST00000453056 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
VPS8-213ENST00000453056 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
VPS8-213ENST00000453056 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
VPS8-213ENST00000453056 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
VPS8-213ENST00000453056 DZIP3Q86Y13 1208 aaKnown RBP20.17■□□□□ 0.82
VPS8-213ENST00000453056 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
VPS8-213ENST00000453056 C10orf71Q711Q0 1435 aa20.17■□□□□ 0.82
VPS8-213ENST00000453056 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
VPS8-213ENST00000453056 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
VPS8-213ENST00000453056 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
VPS8-213ENST00000453056 ZNF652Q9Y2D9 606 aa20.16■□□□□ 0.82
VPS8-213ENST00000453056 HOXB7P09629 217 aa20.15■□□□□ 0.82
VPS8-213ENST00000453056 NLGN2Q8NFZ4 835 aa20.15■□□□□ 0.82
VPS8-213ENST00000453056 MBIPQ9NS73 344 aa20.15■□□□□ 0.82
VPS8-213ENST00000453056 AFDNP55196 1824 aaKnown RBP20.15■□□□□ 0.82
VPS8-213ENST00000453056 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 CAMTA2O94983 1202 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 ZNF853P0CG23 659 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 DDR1Q08345 913 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 NFIXQ14938 502 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 BCL2L12Q9HB09 334 aa20.14■□□□□ 0.81
VPS8-213ENST00000453056 POLRMTO00411 1230 aaKnown RBP20.13■□□□□ 0.81
VPS8-213ENST00000453056 RGL2O15211 777 aa20.13■□□□□ 0.81
VPS8-213ENST00000453056 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
VPS8-213ENST00000453056 TM4SF1P30408 202 aa20.13■□□□□ 0.81
VPS8-213ENST00000453056 WWC1Q8IX03 1113 aa20.13■□□□□ 0.81
VPS8-213ENST00000453056 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
VPS8-213ENST00000453056 DIEXFQ68CQ4 756 aaKnown RBP20.12■□□□□ 0.81
VPS8-213ENST00000453056 KIF6Q6ZMV9 814 aa20.12■□□□□ 0.81
VPS8-213ENST00000453056 NRXN2Q9P2S2 1712 aa20.11■□□□□ 0.81
VPS8-213ENST00000453056 IL16Q14005 1332 aa20.11■□□□□ 0.81
VPS8-213ENST00000453056 MYL6BP14649 208 aa20.11■□□□□ 0.81
VPS8-213ENST00000453056 CLEC4GQ6UXB4 293 aa20.11■□□□□ 0.81
VPS8-213ENST00000453056 BICDL1Q6ZP65 573 aa20.11■□□□□ 0.81
VPS8-213ENST00000453056 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
VPS8-213ENST00000453056 GPR162Q16538 588 aa20.1■□□□□ 0.81
VPS8-213ENST00000453056 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
VPS8-213ENST00000453056 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
VPS8-213ENST00000453056 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
VPS8-213ENST00000453056 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
VPS8-213ENST00000453056 TBC1D9BQ66K14 1250 aa20.09■□□□□ 0.81
VPS8-213ENST00000453056 SETDB2Q96T68 719 aa20.09■□□□□ 0.81
VPS8-213ENST00000453056 CHMP4AQ9BY43 222 aa20.09■□□□□ 0.81
VPS8-213ENST00000453056 NUP98P52948 1817 aa20.09■□□□□ 0.81
VPS8-213ENST00000453056 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.81
VPS8-213ENST00000453056 PXDNLA1KZ92 1463 aa20.08■□□□□ 0.81
VPS8-213ENST00000453056 NPHP1O15259 732 aa20.08■□□□□ 0.81
VPS8-213ENST00000453056 SERPINB2P05120 415 aa20.08■□□□□ 0.81
VPS8-213ENST00000453056 TGFB2P61812 414 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms