RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 USP16Q9Y5T5 823 aa21.3■■□□□ 1
SCAMP4-205ENST00000452128 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
SCAMP4-205ENST00000452128 STARD3NLO95772 234 aa21.29■■□□□ 1
SCAMP4-205ENST00000452128 RFC4P35249 363 aa21.29■■□□□ 1
SCAMP4-205ENST00000452128 NLGN1Q8N2Q7 840 aa21.29■■□□□ 1
SCAMP4-205ENST00000452128 SRP68Q9UHB9 627 aaKnown RBP21.29■■□□□ 1
SCAMP4-205ENST00000452128 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
SCAMP4-205ENST00000452128 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
SCAMP4-205ENST00000452128 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
SCAMP4-205ENST00000452128 A1BGP04217 495 aa21.27■■□□□ 1
SCAMP4-205ENST00000452128 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
SCAMP4-205ENST00000452128 BCL2L12Q9HB09 334 aa21.27■■□□□ 1
SCAMP4-205ENST00000452128 CD2APQ9Y5K6 639 aa21.27■■□□□ 1
SCAMP4-205ENST00000452128 UTRNP46939 3433 aa21.27■■□□□ 1
SCAMP4-205ENST00000452128 MMP10P09238 476 aa21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 TM4SF1P30408 202 aa21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 EIF4A1P60842 406 aaKnown RBP21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 FKBP8Q14318 412 aa21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 NLGN2Q8NFZ4 835 aa21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 RRP7AQ9Y3A4 280 aaKnown RBP21.26■□□□□ 0.99
SCAMP4-205ENST00000452128 BABAM1Q9NWV8 329 aa21.25■□□□□ 0.99
SCAMP4-205ENST00000452128 NARFQ9UHQ1 456 aa21.25■□□□□ 0.99
SCAMP4-205ENST00000452128 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
SCAMP4-205ENST00000452128 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
SCAMP4-205ENST00000452128 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
SCAMP4-205ENST00000452128 GOLGB1Q14789 3259 aaKnown RBP21.23■□□□□ 0.99
SCAMP4-205ENST00000452128 COL15A1P39059 1388 aa21.23■□□□□ 0.99
SCAMP4-205ENST00000452128 C4AP0C0L4 1744 aa21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 NBPF26B4DH59 902 aa21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 CHL1O00533 1208 aa21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 DDR1Q08345 913 aa21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 USPL1Q5W0Q7 1092 aa21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 NBPF10Q6P3W6 841 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 NBPF15Q8N660 670 aa21.22■□□□□ 0.99
SCAMP4-205ENST00000452128 ANP32CO43423 234 aa21.21■□□□□ 0.99
SCAMP4-205ENST00000452128 LMOD3Q0VAK6 560 aa21.21■□□□□ 0.99
SCAMP4-205ENST00000452128 APAF1O14727 1248 aa21.2■□□□□ 0.98
SCAMP4-205ENST00000452128 KDM3BQ7LBC6 1761 aa21.19■□□□□ 0.98
SCAMP4-205ENST00000452128 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
SCAMP4-205ENST00000452128 A0A087WZG4 1122 aa21.18■□□□□ 0.98
SCAMP4-205ENST00000452128 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
SCAMP4-205ENST00000452128 ZPR1O75312 459 aa21.18■□□□□ 0.98
SCAMP4-205ENST00000452128 CAMTA2O94983 1202 aa21.17■□□□□ 0.98
SCAMP4-205ENST00000452128 ZNF853P0CG23 659 aa21.17■□□□□ 0.98
SCAMP4-205ENST00000452128 NFIXQ14938 502 aa21.17■□□□□ 0.98
SCAMP4-205ENST00000452128 PIP4K2AP48426 406 aaPredicted RBP21.16■□□□□ 0.98
SCAMP4-205ENST00000452128 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
SCAMP4-205ENST00000452128 C10orf71Q711Q0 1435 aa21.15■□□□□ 0.98
SCAMP4-205ENST00000452128 LRP10Q7Z4F1 713 aa21.15■□□□□ 0.98
SCAMP4-205ENST00000452128 KLHL34Q8N239 644 aa21.15■□□□□ 0.98
SCAMP4-205ENST00000452128 TBC1D2BQ9UPU7 963 aa21.15■□□□□ 0.98
SCAMP4-205ENST00000452128 YBX3P16989 372 aaKnown RBP eCLIP21.14■□□□□ 0.973e-7■■□□□ 11.4
SCAMP4-205ENST00000452128 MRS2Q9HD23 443 aa21.14■□□□□ 0.97
SCAMP4-205ENST00000452128 PARP3Q9Y6F1 533 aa21.14■□□□□ 0.97
SCAMP4-205ENST00000452128 PDIA6Q15084 440 aa21.13■□□□□ 0.97
SCAMP4-205ENST00000452128 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-205ENST00000452128 RGL2O15211 777 aa21.12■□□□□ 0.97
SCAMP4-205ENST00000452128 KCNA3P22001 575 aa21.12■□□□□ 0.97
SCAMP4-205ENST00000452128 TGFB2P61812 414 aa21.12■□□□□ 0.97
SCAMP4-205ENST00000452128 CFAP44Q96MT7 982 aa21.12■□□□□ 0.97
SCAMP4-205ENST00000452128 KIF13BQ9NQT8 1826 aa21.11■□□□□ 0.97
SCAMP4-205ENST00000452128 TBC1D9BQ66K14 1250 aa21.11■□□□□ 0.97
SCAMP4-205ENST00000452128 PXDNLA1KZ92 1463 aa21.1■□□□□ 0.97
SCAMP4-205ENST00000452128 CCDC27Q2M243 656 aa21.1■□□□□ 0.97
SCAMP4-205ENST00000452128 KRT24Q2M2I5 525 aa21.1■□□□□ 0.97
SCAMP4-205ENST00000452128 CLEC4GQ6UXB4 293 aa21.1■□□□□ 0.97
SCAMP4-205ENST00000452128 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-205ENST00000452128 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
SCAMP4-205ENST00000452128 ERBB4Q15303 1308 aa21.08■□□□□ 0.97
SCAMP4-205ENST00000452128 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
SCAMP4-205ENST00000452128 SERPINB2P05120 415 aa21.08■□□□□ 0.97
SCAMP4-205ENST00000452128 GPR162Q16538 588 aa21.08■□□□□ 0.97
SCAMP4-205ENST00000452128 MBIPQ9NS73 344 aa21.08■□□□□ 0.97
SCAMP4-205ENST00000452128 A0A0G2JLW4 131 aa21.07■□□□□ 0.96
SCAMP4-205ENST00000452128 DPEP1P16444 411 aa21.07■□□□□ 0.96
SCAMP4-205ENST00000452128 IFT57Q9NWB7 429 aa21.07■□□□□ 0.96
SCAMP4-205ENST00000452128 ZNF330Q9Y3S2 320 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-205ENST00000452128 NRXN2Q9P2S2 1712 aa21.07■□□□□ 0.96
SCAMP4-205ENST00000452128 HLFQ16534 295 aa21.05■□□□□ 0.96
SCAMP4-205ENST00000452128 PROSER3Q2NL68 480 aa21.05■□□□□ 0.96
SCAMP4-205ENST00000452128 TTLL7Q6ZT98 887 aa21.05■□□□□ 0.96
SCAMP4-205ENST00000452128 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
SCAMP4-205ENST00000452128 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
SCAMP4-205ENST00000452128 ERVV-1B6SEH8 477 aa21.04■□□□□ 0.96
SCAMP4-205ENST00000452128 HOXB7P09629 217 aa21.04■□□□□ 0.96
SCAMP4-205ENST00000452128 LAS1LQ9Y4W2 734 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-205ENST00000452128 LAMB4A4D0S4 1761 aa21.04■□□□□ 0.96
SCAMP4-205ENST00000452128 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
SCAMP4-205ENST00000452128 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SCAMP4-205ENST00000452128 EIF2S2P20042 333 aaKnown RBP21.02■□□□□ 0.96
SCAMP4-205ENST00000452128 GNAI1P63096 354 aa21.02■□□□□ 0.96
SCAMP4-205ENST00000452128 CALD1Q05682 793 aaKnown RBP21.02■□□□□ 0.96
SCAMP4-205ENST00000452128 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.95
SCAMP4-205ENST00000452128 CARMIL3Q8ND23 1372 aa21.01■□□□□ 0.95
SCAMP4-205ENST00000452128 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
SCAMP4-205ENST00000452128 SETDB2Q96T68 719 aa21.01■□□□□ 0.95
SCAMP4-205ENST00000452128 BCORQ6W2J9 1755 aa21■□□□□ 0.95
SCAMP4-205ENST00000452128 AFDNP55196 1824 aaKnown RBP21■□□□□ 0.95
SCAMP4-205ENST00000452128 SENP3-EIF4A1A0A087X0R7 540 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms