RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-203ENST00000452013 PTGER2P43116 358 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 AMIGO3Q86WK7 504 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 ARXQ96QS3 562 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 LY75O60449 1722 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
COL8A1-203ENST00000452013 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 MIER1Q8N108 512 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 PAPPAQ13219 1627 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 ITGB4P16144 1822 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-203ENST00000452013 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
COL8A1-203ENST00000452013 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 CHMP4AQ9BY43 222 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 NARFQ9UHQ1 456 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-203ENST00000452013 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-203ENST00000452013 KAT6BQ8WYB5 2073 aa11.54□□□□□ -0.56
COL8A1-203ENST00000452013 GYS1P13807 737 aa11.53□□□□□ -0.56
COL8A1-203ENST00000452013 IL16Q14005 1332 aa11.53□□□□□ -0.56
COL8A1-203ENST00000452013 C4BP0C0L5 1744 aa11.52□□□□□ -0.56
COL8A1-203ENST00000452013 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.57
COL8A1-203ENST00000452013 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
COL8A1-203ENST00000452013 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
COL8A1-203ENST00000452013 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
COL8A1-203ENST00000452013 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
COL8A1-203ENST00000452013 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
COL8A1-203ENST00000452013 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
COL8A1-203ENST00000452013 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
COL8A1-203ENST00000452013 HOXB7P09629 217 aa11.51□□□□□ -0.57
COL8A1-203ENST00000452013 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
COL8A1-203ENST00000452013 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
COL8A1-203ENST00000452013 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
COL8A1-203ENST00000452013 ERBB4Q15303 1308 aa11.51□□□□□ -0.57
COL8A1-203ENST00000452013 COL15A1P39059 1388 aa11.51□□□□□ -0.57
COL8A1-203ENST00000452013 NBPF26B4DH59 902 aa11.5□□□□□ -0.57
COL8A1-203ENST00000452013 MMP10P09238 476 aa11.5□□□□□ -0.57
COL8A1-203ENST00000452013 FKBP8Q14318 412 aa11.5□□□□□ -0.57
COL8A1-203ENST00000452013 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
COL8A1-203ENST00000452013 NBPF10Q6P3W6 841 aaKnown RBP11.5□□□□□ -0.57
COL8A1-203ENST00000452013 NBPF15Q8N660 670 aa11.5□□□□□ -0.57
COL8A1-203ENST00000452013 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
COL8A1-203ENST00000452013 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-203ENST00000452013 C5P01031 1676 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 MYL6BP14649 208 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 TM4SF1P30408 202 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-203ENST00000452013 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
COL8A1-203ENST00000452013 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-203ENST00000452013 RGL2O15211 777 aa11.48□□□□□ -0.57
COL8A1-203ENST00000452013 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
COL8A1-203ENST00000452013 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
COL8A1-203ENST00000452013 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
COL8A1-203ENST00000452013 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
COL8A1-203ENST00000452013 MYH16Q9H6N6 1097 aa11.48□□□□□ -0.57
COL8A1-203ENST00000452013 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-203ENST00000452013 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
COL8A1-203ENST00000452013 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
COL8A1-203ENST00000452013 C8orf58Q8NAV2 365 aa11.47□□□□□ -0.57
COL8A1-203ENST00000452013 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
COL8A1-203ENST00000452013 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
COL8A1-203ENST00000452013 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
COL8A1-203ENST00000452013 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL8A1-203ENST00000452013 CASZ1Q86V15 1759 aa11.46□□□□□ -0.57
COL8A1-203ENST00000452013 NFIXQ14938 502 aa11.46□□□□□ -0.57
COL8A1-203ENST00000452013 PDIA6Q15084 440 aa11.46□□□□□ -0.57
COL8A1-203ENST00000452013 CCDC30Q5VVM6 783 aa11.46□□□□□ -0.57
COL8A1-203ENST00000452013 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
COL8A1-203ENST00000452013 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.57
COL8A1-203ENST00000452013 HYPKQ9NX55 129 aa11.46□□□□□ -0.57
COL8A1-203ENST00000452013 LRP5O75197 1615 aa11.46□□□□□ -0.58
COL8A1-203ENST00000452013 SERPINB2P05120 415 aa11.45□□□□□ -0.58
COL8A1-203ENST00000452013 TGFB2P61812 414 aa11.45□□□□□ -0.58
COL8A1-203ENST00000452013 TBC1D9BQ66K14 1250 aa11.45□□□□□ -0.58
COL8A1-203ENST00000452013 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
COL8A1-203ENST00000452013 CICQ96RK0 1608 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-203ENST00000452013 TJP1Q07157 1748 aa11.44□□□□□ -0.58
COL8A1-203ENST00000452013 MAP3K15Q6ZN16 1313 aa11.44□□□□□ -0.58
COL8A1-203ENST00000452013 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
COL8A1-203ENST00000452013 DDR1Q08345 913 aa11.44□□□□□ -0.58
COL8A1-203ENST00000452013 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
COL8A1-203ENST00000452013 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-203ENST00000452013 TTLL7Q6ZT98 887 aa11.44□□□□□ -0.58
COL8A1-203ENST00000452013 CHPF2Q9P2E5 772 aa11.44□□□□□ -0.58
COL8A1-203ENST00000452013 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-203ENST00000452013 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 E9PSI1 815 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 NPHP1O15259 732 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 ANXA1P04083 346 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms