RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 RFC4P35249 363 aa20.55■□□□□ 0.88
TOP3B-211ENST00000449704 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
TOP3B-211ENST00000449704 USP16Q9Y5T5 823 aa20.55■□□□□ 0.88
TOP3B-211ENST00000449704 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
TOP3B-211ENST00000449704 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
TOP3B-211ENST00000449704 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
TOP3B-211ENST00000449704 A1BGP04217 495 aa20.53■□□□□ 0.88
TOP3B-211ENST00000449704 SGIP1Q9BQI5 828 aa20.53■□□□□ 0.88
TOP3B-211ENST00000449704 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
TOP3B-211ENST00000449704 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
TOP3B-211ENST00000449704 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 ARXQ96QS3 562 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
TOP3B-211ENST00000449704 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 TJP1Q07157 1748 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 CHL1O00533 1208 aa20.51■□□□□ 0.87
TOP3B-211ENST00000449704 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
TOP3B-211ENST00000449704 CALD1Q05682 793 aaKnown RBP20.51■□□□□ 0.87
TOP3B-211ENST00000449704 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
TOP3B-211ENST00000449704 UBR2Q8IWV8 1755 aa20.5■□□□□ 0.87
TOP3B-211ENST00000449704 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
TOP3B-211ENST00000449704 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
TOP3B-211ENST00000449704 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
TOP3B-211ENST00000449704 ZPR1O75312 459 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
TOP3B-211ENST00000449704 MIER1Q8N108 512 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 UBR3Q6ZT12 1888 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
TOP3B-211ENST00000449704 GYS1P13807 737 aa20.48■□□□□ 0.87
TOP3B-211ENST00000449704 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
TOP3B-211ENST00000449704 CICQ96RK0 1608 aaPredicted RBP20.48■□□□□ 0.87
TOP3B-211ENST00000449704 COL15A1P39059 1388 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 A0A087WZG4 1122 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 CCDC27Q2M243 656 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 USPL1Q5W0Q7 1092 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
TOP3B-211ENST00000449704 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
TOP3B-211ENST00000449704 GNAI1P63096 354 aa20.46■□□□□ 0.87
TOP3B-211ENST00000449704 MBIPQ9NS73 344 aa20.46■□□□□ 0.87
TOP3B-211ENST00000449704 IFT57Q9NWB7 429 aa20.46■□□□□ 0.87
TOP3B-211ENST00000449704 MMP10P09238 476 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 ZNF853P0CG23 659 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
TOP3B-211ENST00000449704 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
TOP3B-211ENST00000449704 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 NBPF26B4DH59 902 aa20.44■□□□□ 0.86
TOP3B-211ENST00000449704 FKBP8Q14318 412 aa20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NBPF10Q6P3W6 841 aaKnown RBP20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NBPF15Q8N660 670 aa20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
TOP3B-211ENST00000449704 NECTIN2Q92692 538 aa20.42■□□□□ 0.86
TOP3B-211ENST00000449704 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
TOP3B-211ENST00000449704 DZIP3Q86Y13 1208 aaKnown RBP20.41■□□□□ 0.86
TOP3B-211ENST00000449704 SYT17Q9BSW7 474 aa20.41■□□□□ 0.86
TOP3B-211ENST00000449704 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
TOP3B-211ENST00000449704 MYL6BP14649 208 aa20.4■□□□□ 0.86
TOP3B-211ENST00000449704 DUSP27Q5VZP5 1158 aa20.39■□□□□ 0.85
TOP3B-211ENST00000449704 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
TOP3B-211ENST00000449704 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.85
TOP3B-211ENST00000449704 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
TOP3B-211ENST00000449704 IL16Q14005 1332 aa20.38■□□□□ 0.85
TOP3B-211ENST00000449704 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
TOP3B-211ENST00000449704 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 ANXA1P04083 346 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 HOXB7P09629 217 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 TM4SF1P30408 202 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 DDR1Q08345 913 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 NFIXQ14938 502 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
TOP3B-211ENST00000449704 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
TOP3B-211ENST00000449704 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
TOP3B-211ENST00000449704 POLRMTO00411 1230 aaKnown RBP20.34■□□□□ 0.85
TOP3B-211ENST00000449704 PDIA6Q15084 440 aa20.34■□□□□ 0.85
TOP3B-211ENST00000449704 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
TOP3B-211ENST00000449704 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
TOP3B-211ENST00000449704 C4AP0C0L4 1744 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 YY1P25490 414 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 CHPF2Q9P2E5 772 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 COL24A1Q17RW2 1714 aa20.33■□□□□ 0.84
TOP3B-211ENST00000449704 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
TOP3B-211ENST00000449704 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
TOP3B-211ENST00000449704 SERPINB2P05120 415 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
TOP3B-211ENST00000449704 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 ZBTB3Q9H5J0 574 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms