RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
CCDC171-203ENST00000449575 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
CCDC171-203ENST00000449575 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
CCDC171-203ENST00000449575 WDR63Q8IWG1 891 aa12.78□□□□□ -0.36
CCDC171-203ENST00000449575 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
CCDC171-203ENST00000449575 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
CCDC171-203ENST00000449575 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
CCDC171-203ENST00000449575 GNAI1P63096 354 aa12.78□□□□□ -0.36
CCDC171-203ENST00000449575 TSPYL6Q8N831 410 aa12.77□□□□□ -0.36
CCDC171-203ENST00000449575 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.36
CCDC171-203ENST00000449575 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.37
CCDC171-203ENST00000449575 C8orf58Q8NAV2 365 aa12.77□□□□□ -0.37
CCDC171-203ENST00000449575 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
CCDC171-203ENST00000449575 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
CCDC171-203ENST00000449575 NGEFQ8N5V2 710 aa12.76□□□□□ -0.37
CCDC171-203ENST00000449575 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
CCDC171-203ENST00000449575 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
CCDC171-203ENST00000449575 IL16Q14005 1332 aa12.75□□□□□ -0.37
CCDC171-203ENST00000449575 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
CCDC171-203ENST00000449575 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
CCDC171-203ENST00000449575 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
CCDC171-203ENST00000449575 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
CCDC171-203ENST00000449575 A1BGP04217 495 aa12.75□□□□□ -0.37
CCDC171-203ENST00000449575 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
CCDC171-203ENST00000449575 INTS5Q6P9B9 1019 aaKnown RBP12.75□□□□□ -0.37
CCDC171-203ENST00000449575 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
CCDC171-203ENST00000449575 R3HDM1Q15032 1099 aaKnown RBP12.75□□□□□ -0.37
CCDC171-203ENST00000449575 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
CCDC171-203ENST00000449575 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
CCDC171-203ENST00000449575 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
CCDC171-203ENST00000449575 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
CCDC171-203ENST00000449575 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
CCDC171-203ENST00000449575 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
CCDC171-203ENST00000449575 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
CCDC171-203ENST00000449575 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 GNPATO15228 680 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 PHF14O94880 888 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 ANXA1P04083 346 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 ZBED9Q6R2W3 1325 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
CCDC171-203ENST00000449575 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
CCDC171-203ENST00000449575 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
CCDC171-203ENST00000449575 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
CCDC171-203ENST00000449575 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
CCDC171-203ENST00000449575 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 PROSER3Q2NL68 480 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 TRMT2AQ8IZ69 625 aaKnown RBP12.72□□□□□ -0.37
CCDC171-203ENST00000449575 AK7Q96M32 723 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 CCDC87Q9NVE4 849 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 STK32BQ9NY57 414 aa12.72□□□□□ -0.37
CCDC171-203ENST00000449575 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
CCDC171-203ENST00000449575 E9PSI1 815 aa12.71□□□□□ -0.38
CCDC171-203ENST00000449575 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.38
CCDC171-203ENST00000449575 STARD3NLO95772 234 aa12.71□□□□□ -0.38
CCDC171-203ENST00000449575 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.38
CCDC171-203ENST00000449575 GOLGB1Q14789 3259 aaKnown RBP12.7□□□□□ -0.38
CCDC171-203ENST00000449575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
CCDC171-203ENST00000449575 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
CCDC171-203ENST00000449575 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-203ENST00000449575 MYH16Q9H6N6 1097 aa12.7□□□□□ -0.38
CCDC171-203ENST00000449575 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CCDC171-203ENST00000449575 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-203ENST00000449575 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-203ENST00000449575 RPS6KA4O75676 772 aa12.69□□□□□ -0.38
CCDC171-203ENST00000449575 MYL6BP14649 208 aa12.69□□□□□ -0.38
CCDC171-203ENST00000449575 SOS1Q07889 1333 aaPredicted RBP12.69□□□□□ -0.38
CCDC171-203ENST00000449575 VAMP4O75379 141 aa12.69□□□□□ -0.38
CCDC171-203ENST00000449575 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
CCDC171-203ENST00000449575 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
CCDC171-203ENST00000449575 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
CCDC171-203ENST00000449575 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
CCDC171-203ENST00000449575 RTCBQ9Y3I0 505 aaKnown RBP12.68□□□□□ -0.38
CCDC171-203ENST00000449575 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
CCDC171-203ENST00000449575 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
CCDC171-203ENST00000449575 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
CCDC171-203ENST00000449575 COL15A1P39059 1388 aa12.67□□□□□ -0.38
CCDC171-203ENST00000449575 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
CCDC171-203ENST00000449575 NUP98P52948 1817 aa12.67□□□□□ -0.38
CCDC171-203ENST00000449575 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
CCDC171-203ENST00000449575 HOXB7P09629 217 aa12.66□□□□□ -0.38
CCDC171-203ENST00000449575 SSFA2P28290 1259 aa12.66□□□□□ -0.38
CCDC171-203ENST00000449575 TRAPPC3LQ5T215 181 aa12.66□□□□□ -0.38
CCDC171-203ENST00000449575 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
CCDC171-203ENST00000449575 ZBTB7AO95365 584 aa12.65□□□□□ -0.38
CCDC171-203ENST00000449575 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
CCDC171-203ENST00000449575 PHAXQ9H814 394 aaKnown RBP12.65□□□□□ -0.38
CCDC171-203ENST00000449575 MSL1Q68DK7 614 aa12.65□□□□□ -0.38
CCDC171-203ENST00000449575 G2E3Q7L622 706 aa12.65□□□□□ -0.38
CCDC171-203ENST00000449575 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
CCDC171-203ENST00000449575 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
CCDC171-203ENST00000449575 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
CCDC171-203ENST00000449575 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC171-203ENST00000449575 RFC4P35249 363 aa12.63□□□□□ -0.39
CCDC171-203ENST00000449575 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
CCDC171-203ENST00000449575 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms