RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 STARD3NLO95772 234 aa23.7■■□□□ 1.38
RFTN1-205ENST00000449415 TMPOP42166 694 aaKnown RBP23.7■■□□□ 1.38
RFTN1-205ENST00000449415 NEUROD2Q15784 382 aa23.7■■□□□ 1.38
RFTN1-205ENST00000449415 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
RFTN1-205ENST00000449415 DCAF8L1A6NGE4 600 aa23.69■■□□□ 1.38
RFTN1-205ENST00000449415 GYS1P13807 737 aa23.69■■□□□ 1.38
RFTN1-205ENST00000449415 NLGN2Q8NFZ4 835 aa23.69■■□□□ 1.38
RFTN1-205ENST00000449415 RUNDC1Q96C34 613 aa23.69■■□□□ 1.38
RFTN1-205ENST00000449415 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
RFTN1-205ENST00000449415 MMP10P09238 476 aa23.68■■□□□ 1.38
RFTN1-205ENST00000449415 CCDC184Q52MB2 194 aa23.68■■□□□ 1.38
RFTN1-205ENST00000449415 TEX13AQ9BXU3 409 aaPredicted RBP23.68■■□□□ 1.38
RFTN1-205ENST00000449415 KDM3BQ7LBC6 1761 aa23.68■■□□□ 1.38
RFTN1-205ENST00000449415 ANP32CO43423 234 aa23.67■■□□□ 1.38
RFTN1-205ENST00000449415 NLGN1Q8N2Q7 840 aa23.67■■□□□ 1.38
RFTN1-205ENST00000449415 COL15A1P39059 1388 aa23.66■■□□□ 1.38
RFTN1-205ENST00000449415 USP42Q9H9J4 1324 aaKnown RBP23.66■■□□□ 1.38
RFTN1-205ENST00000449415 ZNF330Q9Y3S2 320 aaPredicted RBP23.66■■□□□ 1.38
RFTN1-205ENST00000449415 USP16Q9Y5T5 823 aa23.66■■□□□ 1.38
RFTN1-205ENST00000449415 A1BGP04217 495 aa23.65■■□□□ 1.38
RFTN1-205ENST00000449415 USPL1Q5W0Q7 1092 aa23.65■■□□□ 1.38
RFTN1-205ENST00000449415 ZPR1O75312 459 aa23.64■■□□□ 1.37
RFTN1-205ENST00000449415 FKBP8Q14318 412 aa23.64■■□□□ 1.37
RFTN1-205ENST00000449415 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.37
RFTN1-205ENST00000449415 PNISRQ8TF01 805 aaKnown RBP23.64■■□□□ 1.37
RFTN1-205ENST00000449415 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
RFTN1-205ENST00000449415 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
RFTN1-205ENST00000449415 LMOD3Q0VAK6 560 aa23.63■■□□□ 1.37
RFTN1-205ENST00000449415 EIF5P55010 431 aaKnown RBP23.61■■□□□ 1.37
RFTN1-205ENST00000449415 NARFQ9UHQ1 456 aa23.61■■□□□ 1.37
RFTN1-205ENST00000449415 CD2APQ9Y5K6 639 aa23.61■■□□□ 1.37
RFTN1-205ENST00000449415 PARP3Q9Y6F1 533 aa23.61■■□□□ 1.37
RFTN1-205ENST00000449415 GPR162Q16538 588 aa23.6■■□□□ 1.37
RFTN1-205ENST00000449415 LAMB4A4D0S4 1761 aa23.6■■□□□ 1.37
RFTN1-205ENST00000449415 TSPYL4Q9UJ04 414 aa23.59■■□□□ 1.37
RFTN1-205ENST00000449415 IL6STP40189 918 aaPredicted RBP23.58■■□□□ 1.37
RFTN1-205ENST00000449415 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
RFTN1-205ENST00000449415 MRS2Q9HD23 443 aa23.58■■□□□ 1.37
RFTN1-205ENST00000449415 TRIM35Q9UPQ4 493 aa23.58■■□□□ 1.37
RFTN1-205ENST00000449415 TBC1D2BQ9UPU7 963 aa23.58■■□□□ 1.37
RFTN1-205ENST00000449415 A0A087WZG4 1122 aa23.57■■□□□ 1.36
RFTN1-205ENST00000449415 APAF1O14727 1248 aa23.57■■□□□ 1.36
RFTN1-205ENST00000449415 DDR1Q08345 913 aa23.57■■□□□ 1.36
RFTN1-205ENST00000449415 NPM2Q86SE8 214 aaKnown RBP23.57■■□□□ 1.36
RFTN1-205ENST00000449415 BCL2L12Q9HB09 334 aa23.57■■□□□ 1.36
RFTN1-205ENST00000449415 WWC3Q9ULE0 1092 aa23.57■■□□□ 1.36
RFTN1-205ENST00000449415 LAS1LQ9Y4W2 734 aaKnown RBP23.57■■□□□ 1.36
RFTN1-205ENST00000449415 KIF13BQ9NQT8 1826 aa23.56■■□□□ 1.36
RFTN1-205ENST00000449415 N4BP2Q86UW6 1770 aaPredicted RBP23.55■■□□□ 1.36
RFTN1-205ENST00000449415 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
RFTN1-205ENST00000449415 SCN7AQ01118 1682 aa23.54■■□□□ 1.36
RFTN1-205ENST00000449415 GIGYF1O75420 1035 aaPredicted RBP23.54■■□□□ 1.36
RFTN1-205ENST00000449415 TM4SF1P30408 202 aa23.54■■□□□ 1.36
RFTN1-205ENST00000449415 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
RFTN1-205ENST00000449415 NBPF26B4DH59 902 aa23.53■■□□□ 1.36
RFTN1-205ENST00000449415 NFIXQ14938 502 aa23.53■■□□□ 1.36
RFTN1-205ENST00000449415 NBPF10Q6P3W6 841 aaKnown RBP23.53■■□□□ 1.36
RFTN1-205ENST00000449415 BICDL1Q6ZP65 573 aa23.53■■□□□ 1.36
RFTN1-205ENST00000449415 NBPF15Q8N660 670 aa23.53■■□□□ 1.36
RFTN1-205ENST00000449415 C10orf71Q711Q0 1435 aa23.52■■□□□ 1.36
RFTN1-205ENST00000449415 POLRMTO00411 1230 aaKnown RBP23.52■■□□□ 1.36
RFTN1-205ENST00000449415 DZIP3Q86Y13 1208 aaKnown RBP23.52■■□□□ 1.36
RFTN1-205ENST00000449415 KIAA1551Q9HCM1 1747 aa23.51■■□□□ 1.35
RFTN1-205ENST00000449415 BCORQ6W2J9 1755 aa23.51■■□□□ 1.35
RFTN1-205ENST00000449415 YBX3P16989 372 aaKnown RBP eCLIP23.51■■□□□ 1.35
RFTN1-205ENST00000449415 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
RFTN1-205ENST00000449415 CHD4Q14839 1912 aa23.5■■□□□ 1.35
RFTN1-205ENST00000449415 CAMTA2O94983 1202 aa23.49■■□□□ 1.35
RFTN1-205ENST00000449415 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
RFTN1-205ENST00000449415 BABAM1Q9NWV8 329 aa23.49■■□□□ 1.35
RFTN1-205ENST00000449415 PXDNLA1KZ92 1463 aa23.49■■□□□ 1.35
RFTN1-205ENST00000449415 A0A0G2JLW4 131 aa23.48■■□□□ 1.35
RFTN1-205ENST00000449415 CHL1O00533 1208 aa23.48■■□□□ 1.35
RFTN1-205ENST00000449415 YY1P25490 414 aa23.48■■□□□ 1.35
RFTN1-205ENST00000449415 SERPINB2P05120 415 aa23.47■■□□□ 1.35
RFTN1-205ENST00000449415 MYL6BP14649 208 aa23.47■■□□□ 1.35
RFTN1-205ENST00000449415 EIF2S2P20042 333 aaKnown RBP23.47■■□□□ 1.35
RFTN1-205ENST00000449415 DPEP1P16444 411 aa23.46■■□□□ 1.35
RFTN1-205ENST00000449415 TGFB2P61812 414 aa23.46■■□□□ 1.35
RFTN1-205ENST00000449415 KRT24Q2M2I5 525 aa23.46■■□□□ 1.35
RFTN1-205ENST00000449415 NRXN2Q9P2S2 1712 aa23.46■■□□□ 1.35
RFTN1-205ENST00000449415 NECTIN2Q92692 538 aa23.45■■□□□ 1.34
RFTN1-205ENST00000449415 CFAP44Q96MT7 982 aa23.43■■□□□ 1.34
RFTN1-205ENST00000449415 GRIN3BO60391 1043 aa23.42■■□□□ 1.34
RFTN1-205ENST00000449415 FAM9BQ8IZU0 186 aa23.42■■□□□ 1.34
RFTN1-205ENST00000449415 SETDB2Q96T68 719 aa23.42■■□□□ 1.34
RFTN1-205ENST00000449415 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
RFTN1-205ENST00000449415 CHRNA5P30532 468 aa23.41■■□□□ 1.34
RFTN1-205ENST00000449415 CCDC24Q8N4L8 307 aa23.41■■□□□ 1.34
RFTN1-205ENST00000449415 MBIPQ9NS73 344 aa23.41■■□□□ 1.34
RFTN1-205ENST00000449415 ZNF652Q9Y2D9 606 aa23.41■■□□□ 1.34
RFTN1-205ENST00000449415 CARMIL3Q8ND23 1372 aa23.4■■□□□ 1.34
RFTN1-205ENST00000449415 NUP98P52948 1817 aa23.4■■□□□ 1.34
RFTN1-205ENST00000449415 ANXA1P04083 346 aa23.4■■□□□ 1.34
RFTN1-205ENST00000449415 HLFQ16534 295 aa23.4■■□□□ 1.34
RFTN1-205ENST00000449415 TTLL7Q6ZT98 887 aa23.4■■□□□ 1.34
RFTN1-205ENST00000449415 BCS1LQ9Y276 419 aa23.4■■□□□ 1.34
RFTN1-205ENST00000449415 CALD1Q05682 793 aaKnown RBP23.39■■□□□ 1.33
RFTN1-205ENST00000449415 SALL2Q9Y467 1007 aaPredicted RBP23.39■■□□□ 1.33
RFTN1-205ENST00000449415 ANKRD31Q8N7Z5 1873 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms