RNA–Protein interactions for RNA: ENST00000449294.6

CHL1-207, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-207ENST00000449294 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
CHL1-207ENST00000449294 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
CHL1-207ENST00000449294 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
CHL1-207ENST00000449294 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
CHL1-207ENST00000449294 YY1P25490 414 aa12.57□□□□□ -0.4
CHL1-207ENST00000449294 EIF4A2Q14240 407 aaKnown RBP12.57□□□□□ -0.4
CHL1-207ENST00000449294 FAM196AQ6ZSG2 479 aa12.57□□□□□ -0.4
CHL1-207ENST00000449294 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
CHL1-207ENST00000449294 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
CHL1-207ENST00000449294 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
CHL1-207ENST00000449294 PSEN2P49810 448 aa12.56□□□□□ -0.4
CHL1-207ENST00000449294 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
CHL1-207ENST00000449294 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
CHL1-207ENST00000449294 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
CHL1-207ENST00000449294 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
CHL1-207ENST00000449294 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
CHL1-207ENST00000449294 IL2RBP14784 551 aa12.55□□□□□ -0.4
CHL1-207ENST00000449294 PDE4AP27815 886 aa12.55□□□□□ -0.4
CHL1-207ENST00000449294 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
CHL1-207ENST00000449294 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
CHL1-207ENST00000449294 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
CHL1-207ENST00000449294 ANP32CO43423 234 aa12.54□□□□□ -0.4
CHL1-207ENST00000449294 PDE3BQ13370 1112 aa12.54□□□□□ -0.4
CHL1-207ENST00000449294 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
CHL1-207ENST00000449294 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
CHL1-207ENST00000449294 EYA1Q99502 592 aa12.54□□□□□ -0.4
CHL1-207ENST00000449294 PRKRIP1Q9H875 184 aaPredicted RBP12.54□□□□□ -0.4
CHL1-207ENST00000449294 CASZ1Q86V15 1759 aa12.53□□□□□ -0.4
CHL1-207ENST00000449294 IL13P35225 146 aa12.53□□□□□ -0.4
CHL1-207ENST00000449294 DDB1Q16531 1140 aa12.53□□□□□ -0.4
CHL1-207ENST00000449294 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
CHL1-207ENST00000449294 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
CHL1-207ENST00000449294 EXOC5O00471 708 aa12.52□□□□□ -0.41
CHL1-207ENST00000449294 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
CHL1-207ENST00000449294 E2F4Q16254 413 aa12.52□□□□□ -0.41
CHL1-207ENST00000449294 PDGFDQ9GZP0 370 aaPredicted RBP12.52□□□□□ -0.41
CHL1-207ENST00000449294 NUDCQ9Y266 331 aa12.52□□□□□ -0.41
CHL1-207ENST00000449294 NCAPD2Q15021 1401 aa12.52□□□□□ -0.41
CHL1-207ENST00000449294 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
CHL1-207ENST00000449294 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
CHL1-207ENST00000449294 MEGF6O75095 1541 aa12.51□□□□□ -0.41
CHL1-207ENST00000449294 WNK3Q9BYP7 1800 aa12.51□□□□□ -0.41
CHL1-207ENST00000449294 FOXK1P85037 733 aa12.5□□□□□ -0.41
CHL1-207ENST00000449294 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
CHL1-207ENST00000449294 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
CHL1-207ENST00000449294 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
CHL1-207ENST00000449294 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
CHL1-207ENST00000449294 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
CHL1-207ENST00000449294 KCNQ2O43526 872 aa12.49□□□□□ -0.41
CHL1-207ENST00000449294 SULT6B1Q6IMI4 303 aa12.49□□□□□ -0.41
CHL1-207ENST00000449294 KCTD12Q96CX2 325 aaKnown RBP12.49□□□□□ -0.41
CHL1-207ENST00000449294 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
CHL1-207ENST00000449294 SPON1Q9HCB6 807 aa12.49□□□□□ -0.41
CHL1-207ENST00000449294 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 MFSD10Q14728 455 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
CHL1-207ENST00000449294 RGPD3A6NKT7 1758 aaPredicted RBP12.48□□□□□ -0.41
CHL1-207ENST00000449294 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
CHL1-207ENST00000449294 KDRP35968 1356 aa12.47□□□□□ -0.41
CHL1-207ENST00000449294 HMOX1P09601 288 aa12.47□□□□□ -0.41
CHL1-207ENST00000449294 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
CHL1-207ENST00000449294 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHL1-207ENST00000449294 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
CHL1-207ENST00000449294 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
CHL1-207ENST00000449294 SBF2Q86WG5 1849 aa12.46□□□□□ -0.41
CHL1-207ENST00000449294 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
CHL1-207ENST00000449294 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
CHL1-207ENST00000449294 ZBTB7AO95365 584 aa12.46□□□□□ -0.41
CHL1-207ENST00000449294 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
CHL1-207ENST00000449294 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
CHL1-207ENST00000449294 PLEKHO1Q53GL0 409 aaPredicted RBP12.45□□□□□ -0.42
CHL1-207ENST00000449294 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
CHL1-207ENST00000449294 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
CHL1-207ENST00000449294 UTRNP46939 3433 aa12.44□□□□□ -0.42
CHL1-207ENST00000449294 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
CHL1-207ENST00000449294 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHL1-207ENST00000449294 DSG2Q14126 1118 aa12.43□□□□□ -0.42
CHL1-207ENST00000449294 DIEXFQ68CQ4 756 aaKnown RBP12.43□□□□□ -0.42
CHL1-207ENST00000449294 KCNK17Q96T54 332 aa12.43□□□□□ -0.42
CHL1-207ENST00000449294 FCHSD2O94868 740 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 NEFMP07197 916 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
CHL1-207ENST00000449294 BCL9O00512 1426 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
CHL1-207ENST00000449294 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
CHL1-207ENST00000449294 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
CHL1-207ENST00000449294 MRS2Q9HD23 443 aa12.41□□□□□ -0.42
CHL1-207ENST00000449294 CYP27B1O15528 508 aa12.4□□□□□ -0.42
CHL1-207ENST00000449294 TBC1D12O60347 775 aa12.4□□□□□ -0.42
CHL1-207ENST00000449294 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.42
CHL1-207ENST00000449294 PHKG2P15735 406 aa12.4□□□□□ -0.42
CHL1-207ENST00000449294 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
CHL1-207ENST00000449294 GAS2L2Q8NHY3 880 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms