RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 SYT17Q9BSW7 474 aa13.34□□□□□ -0.27
CTDSPL-207ENST00000447745 UBR2Q8IWV8 1755 aa13.34□□□□□ -0.27
CTDSPL-207ENST00000447745 COL24A1Q17RW2 1714 aa13.33□□□□□ -0.27
CTDSPL-207ENST00000447745 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL-207ENST00000447745 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
CTDSPL-207ENST00000447745 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
CTDSPL-207ENST00000447745 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
CTDSPL-207ENST00000447745 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
CTDSPL-207ENST00000447745 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
CTDSPL-207ENST00000447745 GYS1P13807 737 aa13.31□□□□□ -0.28
CTDSPL-207ENST00000447745 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
CTDSPL-207ENST00000447745 A1BGP04217 495 aa13.3□□□□□ -0.28
CTDSPL-207ENST00000447745 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
CTDSPL-207ENST00000447745 APAF1O14727 1248 aa13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 ZPR1O75312 459 aa13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 MMP10P09238 476 aa13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 EIF4A1P60842 406 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-207ENST00000447745 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 COL15A1P39059 1388 aa13.28□□□□□ -0.28
CTDSPL-207ENST00000447745 A0A087WZG4 1122 aa13.27□□□□□ -0.29
CTDSPL-207ENST00000447745 GIGYF1O75420 1035 aaPredicted RBP13.27□□□□□ -0.29
CTDSPL-207ENST00000447745 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
CTDSPL-207ENST00000447745 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
CTDSPL-207ENST00000447745 TM4SF1P30408 202 aa13.26□□□□□ -0.29
CTDSPL-207ENST00000447745 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL-207ENST00000447745 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
CTDSPL-207ENST00000447745 TBC1D2BQ9UPU7 963 aa13.26□□□□□ -0.29
CTDSPL-207ENST00000447745 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
CTDSPL-207ENST00000447745 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
CTDSPL-207ENST00000447745 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 CHL1O00533 1208 aa13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 NBPF10Q6P3W6 841 aaKnown RBP13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
CTDSPL-207ENST00000447745 SENP3-EIF4A1A0A087X0R7 540 aa13.24□□□□□ -0.29
CTDSPL-207ENST00000447745 DDR1Q08345 913 aa13.24□□□□□ -0.29
CTDSPL-207ENST00000447745 NFIXQ14938 502 aa13.23□□□□□ -0.29
CTDSPL-207ENST00000447745 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
CTDSPL-207ENST00000447745 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
CTDSPL-207ENST00000447745 GPR162Q16538 588 aa13.22□□□□□ -0.29
CTDSPL-207ENST00000447745 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
CTDSPL-207ENST00000447745 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
CTDSPL-207ENST00000447745 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
CTDSPL-207ENST00000447745 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.29
CTDSPL-207ENST00000447745 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
CTDSPL-207ENST00000447745 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
CTDSPL-207ENST00000447745 FAM9BQ8IZU0 186 aa13.21□□□□□ -0.29
CTDSPL-207ENST00000447745 NGEFQ8N5V2 710 aa13.21□□□□□ -0.29
CTDSPL-207ENST00000447745 SERPINB2P05120 415 aa13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 MYL6BP14649 208 aa13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 TGFB2P61812 414 aa13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 TBC1D9BQ66K14 1250 aa13.2□□□□□ -0.3
CTDSPL-207ENST00000447745 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
CTDSPL-207ENST00000447745 GNAI1P63096 354 aa13.19□□□□□ -0.3
CTDSPL-207ENST00000447745 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
CTDSPL-207ENST00000447745 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
CTDSPL-207ENST00000447745 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
CTDSPL-207ENST00000447745 YBX3P16989 372 aaKnown RBP eCLIP13.18□□□□□ -0.34e-7■■■■□ 24.1
CTDSPL-207ENST00000447745 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
CTDSPL-207ENST00000447745 CLEC4GQ6UXB4 293 aa13.18□□□□□ -0.3
CTDSPL-207ENST00000447745 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
CTDSPL-207ENST00000447745 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
CTDSPL-207ENST00000447745 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
CTDSPL-207ENST00000447745 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 ERBB4Q15303 1308 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 DPEP1P16444 411 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 PDIA6Q15084 440 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 TTLL7Q6ZT98 887 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 UTRNP46939 3433 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
CTDSPL-207ENST00000447745 ANXA1P04083 346 aa13.16□□□□□ -0.3
CTDSPL-207ENST00000447745 HLFQ16534 295 aa13.16□□□□□ -0.3
CTDSPL-207ENST00000447745 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
CTDSPL-207ENST00000447745 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
CTDSPL-207ENST00000447745 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
CTDSPL-207ENST00000447745 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
CTDSPL-207ENST00000447745 ERVV-1B6SEH8 477 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms